iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-20	71.9	581	612
UBD/Beta-Prp	1.80e-47	162.0	100	315

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHt++ ++l f +d + l++++ D tikvWD+
   Q: 581  GHTAKLNDLTFsPDsRWLITAAMDSTIKVWDI 612
           8***********999****************6 PP

UBD/Beta-Prp

   S: 33   tikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht..lkghedsvlslsfsp.sgdklvsGshdrtirvwdletg 126
           +i  + ++ gk +r +  gh++ v  +    +   l+   + +++kvw++st +      ++ +e+++++++  p + +k+v Gs+   +++ +++++
   Q: 100  CI--YAWRAGKHIRHVyRGHQKDVHLLLPFGS--SLIAIDRQNVLKVWNISTEDVYLEvpFRSEEFQITAVTHPPtYINKIVLGSQQGQLKILNIKKN 193
           43..4445555666665677777765543333..4777777788899988888887652255888888888888855599999999999999999999 PP
   S: 127  qcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtd 223
           +++  tls hd+ ++c++ +p  ++++ G+ D+t+ l +lk++++l  +++ + ++v+ lsf+ +g + lvs+  +g+  +w+l++ +   +l++h++
   Q: 194  SVVC-TLSHHDSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQ-DWGQVTNLSFRTDGpPILVSACSNGYMAFWNLEERKLAGQLQAHEE 289
           9998.9999999999999999779999999999999999999999999987.8999999998888878888888899999999998889999999999 PP
   S: 224  nvksvrfspnderlvsgssDgsiriW 249
            v+    +p +  + ++s D+s r++
   Q: 290  SVTTAICLPSEPVVFTTSPDNSMRMF 315
           99988888888888888888888764 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MTHLRSEDKP QSEERKSVFK ESSCIFRRNR ALGYVSNQVP AVTRYVQRRR DTLLITCIGR 60
SFQVYTANHF RLLHVSGLHP DEITALATDR LHTYTASNKC IYAWRAGKHI RHVYRGHQKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGCCACAC GTGTTTTGGC AGTAAACATT TTCGGCATGT TGCGGAAATC GTTTATATTA 60
GCTTAAAAAA TCGATAAAAA GACAGAAAGA GACATTTCGG ACAGTAAAAT GACGCATCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0009267--P:cellular response to starvation
GO:0006364--P:rRNA processing

KEGG

dme:Dmel_CG9799

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	32.32	2.00e-123	436.00
IUUC-Aml-002289	Ailuropoda melanoleuca	39.89	0.00e+00	666.00
IUUC-Atr-002859	Amborella trichopoda	31.97	2.00e-108	385.00
IUUC-Apl-003505	Anas platyrhynchos	44.01	0.00e+00	635.00
IUUC-Aca-004339	Anolis carolinensis	42.03	0.00e+00	699.00
IUUC-Aly-005913	Arabidopsis lyrata	32.01	3.00e-124	439.00
IUUC-Ath-006767	Arabidopsis thaliana	32.22	2.00e-126	446.00
IUUC-Ago-007763	Ashbya gossypii	29.93	1.00e-94	340.00
IUUC-Acl-008275	Aspergillus clavatus	28.59	5.00e-70	258.00
IUUC-Afl-008457	Aspergillus flavus	30.16	1.00e-73	270.00
IUUC-Afu-008914	Aspergillus fumigatus	27.34	1.00e-77	283.00
IUUC-Ani-009225	Aspergillus nidulans	28.30	4.00e-76	279.00
IUUC-Aor-010046	Aspergillus oryzae	29.12	2.00e-95	343.00
IUUC-Ate-010337	Aspergillus terreus	30.36	3.00e-99	356.00
IUUC-Ame-010963	Astyanax mexicanus	41.99	0.00e+00	684.00
IUUC-Bgr-011973	Blumeria graminis	27.51	4.00e-87	315.00
IUUC-Bta-012462	Bos taurus	39.66	0.00e+00	663.00
IUUC-Bci-013940	Botrytis cinerea	25.46	3.00e-81	296.00
IUUC-Bdi-014725	Brachypodium distachyon	32.54	1.00e-123	436.00
IUUC-Bol-016534	Brassica oleracea	32.48	1.00e-123	437.00
IUUC-Bra-016781	Brassica rapa	32.26	7.00e-122	430.00
IUUC-Cel-018581	Caenorhabditis elegans	30.51	5.00e-102	364.00
IUUC-Cja-019675	Callithrix jacchus	39.24	0.00e+00	677.00
IUUC-Cfa-020118	Canis familiaris	40.57	0.00e+00	662.00
IUUC-Cpo-021798	Cavia porcellus	39.91	0.00e+00	664.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	29.08	2.00e-26	112.00
IUUC-Csa-023547	Chlorocebus sabaeus	39.89	0.00e+00	663.00
IUUC-Cho-024518	Choloepus hoffmanni	36.72	1.00e-96	347.00
IUUC-Cin-025339	Ciona intestinalis	38.41	2.00e-177	615.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.08	2.00e-98	353.00
IUUC-Cne-026859	Cryptococcus neoformans	30.99	2.00e-125	442.00
IUUC-Cme-027173	Cyanidioschyzon merolae	26.29	1.00e-73	270.00
IUUC-Dre-027733	Danio rerio	42.92	0.00e+00	694.00
IUUC-Dno-029439	Dasypus novemcinctus	40.30	0.00e+00	650.00
IUUC-Dor-030329	Dipodomys ordii	42.02	7.00e-90	324.00
IUUC-Dse-031511	Dothistroma septosporum	26.16	8.00e-77	281.00
IUUC-Ete-032930	Echinops telfairi	37.87	9.00e-155	540.00
IUUC-Eca-033302	Equus caballus	40.43	0.00e+00	663.00
IUUC-Eeu-034516	Erinaceus europaeus	39.98	0.00e+00	677.00
IUUC-Fca-036064	Felis catus	40.47	0.00e+00	663.00
IUUC-Fal-037024	Ficedula albicollis	43.07	0.00e+00	702.00
IUUC-Fox-037787	Fusarium oxysporum	28.04	8.00e-84	304.00
IUUC-Fso-038378	Fusarium solani	28.36	3.00e-85	309.00
IUUC-Gmo-039637	Gadus morhua	41.09	4.00e-110	390.00
IUUC-Ggr-040108	Gaeumannomyces graminis	26.90	1.00e-83	304.00
IUUC-Gga-040982	Gallus gallus	42.62	0.00e+00	707.00
IUUC-Gac-041565	Gasterosteus aculeatus	40.11	9.00e-174	603.00
IUUC-Gma-043414	Glycine max	32.83	2.00e-128	452.00
IUUC-Ggo-045463	Gorilla gorilla	39.56	0.00e+00	673.00
IUUC-Hsa-045675	Homo sapiens	39.65	0.00e+00	677.00
IUUC-Hvu-047352	Hordeum vulgare	32.69	5.00e-116	411.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	39.71	0.00e+00	683.00
IUUC-Kpa-049164	Komagataella pastoris	29.80	3.00e-91	329.00
IUUC-Lch-050476	Latimeria chalumnae	41.94	0.00e+00	702.00
IUUC-Lpe-051556	Leersia perrieri	33.52	1.00e-81	296.00
IUUC-Loc-052820	Lepisosteus oculatus	42.34	0.00e+00	696.00
IUUC-Lma-052961	Leptosphaeria maculans	27.30	3.00e-73	269.00
IUUC-Laf-054006	Loxodonta africana	40.36	0.00e+00	653.00
IUUC-Mcc-055037	Macaca mulatta	39.75	0.00e+00	676.00
IUUC-Mor-057280	Magnaporthe oryzae	27.55	5.00e-89	322.00
IUUC-Mpo-057408	Magnaporthe poae	26.80	3.00e-82	299.00
IUUC-Mtr-058473	Medicago truncatula	32.87	1.00e-132	466.00
IUUC-Mla-058892	Melampsora laricipopulina	30.40	3.00e-101	362.00
IUUC-Mga-059598	Meleagris gallopavo	37.39	2.00e-152	532.00
IUUC-Mvi-060334	Microbotryum violaceum	32.42	7.00e-103	367.00
IUUC-Mmr-061239	Microcebus murinus	40.13	0.00e+00	665.00
IUUC-Mdo-062471	Monodelphis domestica	41.24	0.00e+00	645.00
IUUC-Mmu-063872	Mus musculus	40.20	0.00e+00	679.00
IUUC-Mac-064631	Musa acuminata	32.90	5.00e-117	414.00
IUUC-Mpu-066039	Mustela putorius furo	40.38	0.00e+00	686.00
IUUC-Mlu-067485	Myotis lucifugus	40.18	0.00e+00	668.00
IUUC-Nfi-068319	Neosartorya fischeri	26.79	9.00e-78	284.00
IUUC-Ncr-068725	Neurospora crassa	27.81	2.00e-89	323.00
IUUC-Nle-069050	Nomascus leucogenys	40.31	0.00e+00	683.00
IUUC-Opr-070437	Ochotona princeps	33.45	7.00e-53	201.00
IUUC-Ont-071574	Oreochromis niloticus	41.31	0.00e+00	643.00
IUUC-Oan-072826	Ornithorhynchus anatinus	41.34	0.00e+00	682.00
IUUC-Ocu-073995	Oryctolagus cuniculus	39.37	0.00e+00	644.00
IUUC-Oba-075407	Oryza barthii	30.43	5.00e-106	378.00
IUUC-Obr-076451	Oryza brachyantha	32.90	6.00e-130	457.00
IUUC-Ogl-077535	Oryza glaberrima	32.51	9.00e-127	447.00
IUUC-Ogu-077995	Oryza glumaepatula	30.29	2.00e-104	373.00
IUUC-Oin-079431	Oryza indica	32.76	8.00e-129	453.00
IUUC-Olo-080495	Oryza longistaminata	31.20	1.00e-103	370.00
IUUC-Oni-082336	Oryza nivara	31.78	1.00e-118	419.00
IUUC-Opu-084028	Oryza punctata	31.88	6.00e-109	387.00
IUUC-Oru-084500	Oryza rufipogon	29.88	1.00e-103	370.00
IUUC-Osa-086242	Oryza sativa	32.47	8.00e-129	453.00
IUUC-Ola-086612	Oryzias latipes	41.91	5.00e-148	517.00
IUUC-Olu-087703	Ostreococcus lucimarinus	27.50	6.00e-86	311.00
IUUC-Oga-088572	Otolemur garnettii	40.25	0.00e+00	665.00
IUUC-Oar-090363	Ovis aries	40.16	0.00e+00	676.00
IUUC-Ptr-090477	Pan troglodytes	39.53	0.00e+00	669.00
IUUC-Pan-092914	Papio anubis	39.87	0.00e+00	678.00
IUUC-Psi-093019	Pelodiscus sinensis	42.53	0.00e+00	696.00
IUUC-Pma-094303	Petromyzon marinus	36.52	5.00e-148	517.00
IUUC-Pno-094938	Phaeosphaeria nodorum	25.34	1.00e-65	244.00
IUUC-Ppa-095720	Physcomitrella patens	34.06	2.00e-131	462.00
IUUC-Pfo-097034	Poecilia formosa	39.14	4.00e-174	604.00
IUUC-Pab-097669	Pongo abelii	39.98	0.00e+00	680.00
IUUC-Pop-098835	Populus trichocarpa	33.30	3.00e-126	445.00
IUUC-Pca-101097	Procavia capensis	35.81	3.00e-72	266.00
IUUC-Ppe-101430	Prunus persica	32.97	6.00e-129	454.00
IUUC-Pva-103152	Pteropus vampyrus	40.18	0.00e+00	678.00
IUUC-Pgr-103517	Puccinia graminis	29.64	3.00e-112	399.00
IUUC-Ptt-103697	Puccinia triticina	29.62	7.00e-87	314.00
IUUC-Pte-104121	Pyrenophora teres	26.62	3.00e-78	286.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	26.43	6.00e-78	285.00
IUUC-Rno-105435	Rattus norvegicus	40.91	0.00e+00	674.00
IUUC-Sce-106202	Saccharomyces cerevisiae	29.23	2.00e-87	316.00
IUUC-Sha-107272	Sarcophilus harrisii	41.76	2.00e-180	625.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	32.26	1.00e-125	443.00
IUUC-Spo-108256	Schizosaccharomyces pombe	32.12	2.00e-121	429.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	25.34	5.00e-81	295.00
IUUC-Smo-109445	Selaginella moellendorffii	34.09	2.00e-127	449.00
IUUC-Sit-110051	Setaria italica	31.75	1.00e-125	443.00
IUUC-Sly-111181	Solanum lycopersicum	33.33	6.00e-129	454.00
IUUC-Stu-112018	Solanum tuberosum	32.69	3.00e-129	455.00
IUUC-Sar-113348	Sorex araneus	40.00	4.00e-132	464.00
IUUC-Sbi-114282	Sorghum bicolor	32.86	6.00e-129	454.00
IUUC-Sre-114946	Sporisorium reilianum	27.95	8.00e-69	254.00
IUUC-Ssc-115287	Sus scrofa	40.45	0.00e+00	679.00
IUUC-Tgu-117138	Taeniopygia guttata	42.07	3.00e-170	591.00
IUUC-Tru-118232	Takifugu rubripes	40.98	2.00e-180	625.00
IUUC-Tsy-119502	Tarsius syrichta	33.53	4.00e-139	488.00
IUUC-Tni-120378	Tetraodon nigroviridis	42.63	0.00e+00	641.00
IUUC-Tca-121506	Theobroma cacao	32.72	7.00e-120	424.00
IUUC-Tre-122166	Trichoderma reesei	27.39	4.00e-85	308.00
IUUC-Tvi-122385	Trichoderma virens	26.87	2.00e-87	316.00
IUUC-Tae-122836	Triticum aestivum	32.58	5.00e-129	454.00
IUUC-Tur-126490	Triticum urartu	33.10	3.00e-95	342.00
IUUC-Tme-127157	Tuber melanosporum	28.92	1.00e-85	310.00
IUUC-Tbe-127981	Tupaia belangeri	41.91	2.00e-159	555.00
IUUC-Ttr-128886	Tursiops truncatus	39.31	0.00e+00	663.00
IUUC-Uma-129439	Ustilago maydis	28.03	1.00e-75	277.00
IUUC-Vda-129760	Verticillium dahliae	26.67	2.00e-83	303.00
IUUC-Vpa-130456	Vicugna pacos	39.93	0.00e+00	670.00
IUUC-Vvi-131086	Vitis vinifera	32.43	6.00e-124	437.00
IUUC-Xtr-131829	Xenopus tropicalis	42.82	0.00e+00	699.00
IUUC-Xma-133588	Xiphophorus maculatus	39.07	3.00e-170	591.00
IUUC-Yli-134328	Yarrowia lipolytica	29.50	6.00e-94	338.00
IUUC-Zma-135808	Zea mays	32.48	2.00e-128	452.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence