iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000009326.2	ENSLACT00000010664.1	ENSLACP00000010585.1
ENSLACG00000009326.2	ENSLACT00000026649.1	ENSLACP00000023165.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-26	91.4	535	571
UBD/Beta-Prp	2.20e-70	237.4	319	576

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH + ++++af +d + lv++s D+t++ WDl +g l
   Q: 535  GHRGQINDMAFsPDgRWLVTASMDCTLRTWDLPSGCL 571
           8***********99999***************99976 PP

UBD/Beta-Prp

   S: 9    hksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrti.kvwdls.........tgkc 86
           h+++ +++k+  +++++++++++dgt++ +++  + +  +  ghe   ta + + dg  ++ +++ ++i   w++           +k 
   Q: 319  HSAPPNKIKYhGQNGQQILSAGQDGTLQSFSTVHERF-NKSLGHE---TARQSDWDG--IIACHRGYLIaTTWNYHrssmgvhklEPKR 401
           7889999***889**************9999999777.5556888...566666665..99*****988357*9999999999999999 PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
           +h+ ++ + +++ +++   g++ v+G +   + v+++++g    +   ++ h+g +++v+v++ ++l+++ + D+++++W+ kt++l++
   Q: 402  FHKDRAINVTATVVDITSCGNFAVVGISSGHVDVYNMQSGLHRGHygKEKAHEGPIRGVAVDGLNQLIITTGGDGIIKFWKFKTKELVH 490
           99999999999999999999*******************9877768899**************************************** PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           t + +  ++   + +++++  l+ +s+d ++ + d++t ++vr++ gh+ ++++++fsp++ +lv++s+D ++r Wdl sg l+ ++ 
   Q: 491  TIELNTSPA--IMLLHRESSMLAIASDDFSICVLDIETRKIVRKFSGHRGQINDMAFSPDGRWLVTASMDCTLRTWDLPSGCLIDCFL 576
           **8744444..5566788899*********************************************************9998887775 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSSNKKGSGI FLGFRALGLY SNHLAHVVRY HKRHREFYLL TAAGKSFHTY NVKKLGIVAV 60
SNALPEDITC LAADRMLVFA SHGNLVKAFA RSKEVVHTYK GHSAEVCLLL PFGDHVISVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGGCATT AGTCTGCGCC GGAACTCAGA GTATTAGGGC TGAGTTGCCG GTGCGTGTGG 60
GGGGAACTGT AGCGCTGTAA CACCCTGACC CTCCATGTGT CGGTCGCTAG GAGGAAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	35.66	2.00e-144	506.00
IUUC-Aml-002289	Ailuropoda melanoleuca	69.89	0.00e+00	1264.00
IUUC-Atr-002859	Amborella trichopoda	33.60	2.00e-127	449.00
IUUC-Apl-003505	Anas platyrhynchos	73.78	0.00e+00	1216.00
IUUC-Aca-004339	Anolis carolinensis	74.83	0.00e+00	1354.00
IUUC-Aly-005913	Arabidopsis lyrata	35.84	5.00e-156	545.00
IUUC-Ath-006767	Arabidopsis thaliana	35.96	3.00e-157	548.00
IUUC-Ago-007763	Ashbya gossypii	31.35	1.00e-110	394.00
IUUC-Acl-008275	Aspergillus clavatus	39.58	7.00e-62	231.00
IUUC-Afl-008457	Aspergillus flavus	31.28	7.00e-87	315.00
IUUC-Afu-008914	Aspergillus fumigatus	36.39	5.00e-56	213.00
IUUC-Ani-009225	Aspergillus nidulans	25.95	1.00e-64	241.00
IUUC-Aor-010046	Aspergillus oryzae	30.30	1.00e-110	394.00
IUUC-Ate-010337	Aspergillus terreus	34.57	1.00e-77	285.00
IUUC-Ame-010963	Astyanax mexicanus	70.59	0.00e+00	1276.00
IUUC-Bgr-011973	Blumeria graminis	33.57	5.00e-81	296.00
IUUC-Bta-012462	Bos taurus	68.61	0.00e+00	1223.00
IUUC-Bci-013940	Botrytis cinerea	33.46	1.00e-76	281.00
IUUC-Bdi-014725	Brachypodium distachyon	34.62	6.00e-148	518.00
IUUC-Bol-016534	Brassica oleracea	35.80	8.00e-155	541.00
IUUC-Bra-016781	Brassica rapa	36.34	1.00e-154	540.00
IUUC-Cel-018581	Caenorhabditis elegans	28.57	3.00e-100	360.00
IUUC-Cja-019675	Callithrix jacchus	68.79	0.00e+00	1272.00
IUUC-Cfa-020118	Canis familiaris	69.29	0.00e+00	1238.00
IUUC-Cpo-021798	Cavia porcellus	68.20	0.00e+00	1205.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	26.23	1.00e-25	111.00
IUUC-Csa-023547	Chlorocebus sabaeus	69.68	0.00e+00	1248.00
IUUC-Cho-024518	Choloepus hoffmanni	69.73	1.00e-156	547.00
IUUC-Cin-025339	Ciona intestinalis	46.52	0.00e+00	800.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	30.29	3.00e-110	393.00
IUUC-Cne-026859	Cryptococcus neoformans	32.93	2.00e-138	486.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.69	4.00e-87	316.00
IUUC-Dre-027733	Danio rerio	69.69	0.00e+00	1297.00
IUUC-Dno-029439	Dasypus novemcinctus	68.57	0.00e+00	1231.00
IUUC-Dor-030329	Dipodomys ordii	71.40	0.00e+00	657.00
IUUC-Dse-031511	Dothistroma septosporum	31.70	3.00e-64	239.00
IUUC-Dme-031694	Drosophila melanogaster	41.94	0.00e+00	716.00
IUUC-Ete-032930	Echinops telfairi	62.95	0.00e+00	999.00
IUUC-Eca-033302	Equus caballus	69.46	0.00e+00	1247.00
IUUC-Eeu-034516	Erinaceus europaeus	69.55	0.00e+00	1293.00
IUUC-Fca-036064	Felis catus	69.02	0.00e+00	1222.00
IUUC-Fal-037024	Ficedula albicollis	71.88	0.00e+00	1322.00
IUUC-Fox-037787	Fusarium oxysporum	30.85	9.00e-65	242.00
IUUC-Fso-038378	Fusarium solani	32.67	6.00e-66	246.00
IUUC-Gmo-039637	Gadus morhua	55.79	7.00e-162	563.00
IUUC-Ggr-040108	Gaeumannomyces graminis	32.37	1.00e-69	258.00
IUUC-Gga-040982	Gallus gallus	73.70	0.00e+00	1349.00
IUUC-Gac-041565	Gasterosteus aculeatus	58.00	0.00e+00	1001.00
IUUC-Gma-043185	Glycine max	35.45	3.00e-158	552.00
IUUC-Ggo-045463	Gorilla gorilla	68.75	0.00e+00	1262.00
IUUC-Hsa-045675	Homo sapiens	69.02	0.00e+00	1268.00
IUUC-Hvu-047352	Hordeum vulgare	34.99	2.00e-132	466.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	69.25	0.00e+00	1278.00
IUUC-Kpa-049164	Komagataella pastoris	30.84	1.00e-98	354.00
IUUC-Lpe-051556	Leersia perrieri	29.78	1.00e-99	357.00
IUUC-Loc-052820	Lepisosteus oculatus	74.58	0.00e+00	1351.00
IUUC-Lma-052961	Leptosphaeria maculans	32.58	6.00e-59	222.00
IUUC-Laf-054006	Loxodonta africana	66.74	0.00e+00	1194.00
IUUC-Mcc-055037	Macaca mulatta	69.02	0.00e+00	1266.00
IUUC-Mor-057280	Magnaporthe oryzae	32.79	4.00e-73	270.00
IUUC-Mpo-057408	Magnaporthe poae	32.01	1.00e-69	258.00
IUUC-Mtr-058473	Medicago truncatula	35.13	8.00e-153	534.00
IUUC-Mla-058892	Melampsora laricipopulina	33.94	1.00e-115	410.00
IUUC-Mga-059598	Meleagris gallopavo	62.35	0.00e+00	1027.00
IUUC-Mvi-060334	Microbotryum violaceum	33.98	3.00e-121	429.00
IUUC-Mmr-061239	Microcebus murinus	68.57	0.00e+00	1236.00
IUUC-Mdo-062471	Monodelphis domestica	68.24	0.00e+00	1199.00
IUUC-Mmu-063872	Mus musculus	68.80	0.00e+00	1276.00
IUUC-Mac-064631	Musa acuminata	34.58	1.00e-135	476.00
IUUC-Mpu-066039	Mustela putorius furo	69.02	0.00e+00	1266.00
IUUC-Mlu-067485	Myotis lucifugus	69.54	0.00e+00	1257.00
IUUC-Nfi-068319	Neosartorya fischeri	24.95	9.00e-62	231.00
IUUC-Ncr-068725	Neurospora crassa	31.88	6.00e-69	256.00
IUUC-Nle-069050	Nomascus leucogenys	69.35	0.00e+00	1276.00
IUUC-Opr-070437	Ochotona princeps	66.67	2.00e-103	370.00
IUUC-Ont-071574	Oreochromis niloticus	60.22	0.00e+00	1079.00
IUUC-Oan-072826	Ornithorhynchus anatinus	69.82	0.00e+00	1251.00
IUUC-Ocu-073995	Oryctolagus cuniculus	68.46	0.00e+00	1204.00
IUUC-Oba-075407	Oryza barthii	32.13	5.00e-122	431.00
IUUC-Obr-076451	Oryza brachyantha	35.22	2.00e-151	530.00
IUUC-Ogl-077535	Oryza glaberrima	34.78	2.00e-149	522.00
IUUC-Ogu-077995	Oryza glumaepatula	31.43	1.00e-119	424.00
IUUC-Oin-079431	Oryza indica	35.08	1.00e-151	530.00
IUUC-Olo-080495	Oryza longistaminata	31.68	6.00e-118	418.00
IUUC-Oni-082336	Oryza nivara	33.81	9.00e-140	491.00
IUUC-Opu-084028	Oryza punctata	33.37	4.00e-127	449.00
IUUC-Oru-084500	Oryza rufipogon	31.64	1.00e-118	421.00
IUUC-Osa-086242	Oryza sativa	34.86	1.00e-150	526.00
IUUC-Ola-086612	Oryzias latipes	56.02	0.00e+00	842.00
IUUC-Olu-087703	Ostreococcus lucimarinus	28.00	9.00e-105	374.00
IUUC-Oga-088572	Otolemur garnettii	68.79	0.00e+00	1238.00
IUUC-Oar-090363	Ovis aries	68.80	0.00e+00	1252.00
IUUC-Ptr-090477	Pan troglodytes	69.13	0.00e+00	1251.00
IUUC-Pan-092914	Papio anubis	69.24	0.00e+00	1270.00
IUUC-Psi-093019	Pelodiscus sinensis	75.48	0.00e+00	1375.00
IUUC-Pma-094303	Petromyzon marinus	52.24	0.00e+00	845.00
IUUC-Pno-094938	Phaeosphaeria nodorum	34.33	5.00e-54	206.00
IUUC-Ppa-095720	Physcomitrella patens	34.34	2.00e-147	516.00
IUUC-Pfo-097034	Poecilia formosa	58.41	0.00e+00	1040.00
IUUC-Pab-097669	Pongo abelii	69.35	0.00e+00	1272.00
IUUC-Pop-098835	Populus trichocarpa	35.40	8.00e-154	537.00
IUUC-Pca-101097	Procavia capensis	58.76	4.00e-150	525.00
IUUC-Ppe-101430	Prunus persica	35.02	4.00e-156	545.00
IUUC-Pva-103152	Pteropus vampyrus	69.81	0.00e+00	1275.00
IUUC-Pgr-103517	Puccinia graminis	30.69	3.00e-120	426.00
IUUC-Ptt-103697	Puccinia triticina	32.29	2.00e-95	343.00
IUUC-Pte-104121	Pyrenophora teres	32.18	3.00e-62	233.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	32.12	1.00e-62	234.00
IUUC-Rno-105435	Rattus norvegicus	69.47	0.00e+00	1256.00
IUUC-Sce-106202	Saccharomyces cerevisiae	30.49	2.00e-101	363.00
IUUC-Sha-107272	Sarcophilus harrisii	67.02	0.00e+00	1137.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	34.03	1.00e-146	513.00
IUUC-Spo-108256	Schizosaccharomyces pombe	34.15	2.00e-145	509.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	32.84	8.00e-75	275.00
IUUC-Smo-108762	Selaginella moellendorffii	34.31	2.00e-150	526.00
IUUC-Sit-110051	Setaria italica	35.04	2.00e-147	516.00
IUUC-Sly-111181	Solanum lycopersicum	35.65	1.00e-158	553.00
IUUC-Stu-112018	Solanum tuberosum	35.58	6.00e-157	548.00
IUUC-Sar-113348	Sorex araneus	67.74	0.00e+00	877.00
IUUC-Sbi-114282	Sorghum bicolor	34.43	9.00e-148	517.00
IUUC-Sre-114946	Sporisorium reilianum	32.37	4.00e-98	353.00
IUUC-Ssc-115287	Sus scrofa	69.43	0.00e+00	1262.00
IUUC-Tgu-117138	Taeniopygia guttata	67.07	0.00e+00	1083.00
IUUC-Tru-118232	Takifugu rubripes	59.39	0.00e+00	1056.00
IUUC-Tsy-119502	Tarsius syrichta	57.49	0.00e+00	989.00
IUUC-Tni-120378	Tetraodon nigroviridis	58.98	0.00e+00	1028.00
IUUC-Tca-121506	Theobroma cacao	35.74	1.00e-149	523.00
IUUC-Tre-122166	Trichoderma reesei	31.72	2.00e-74	273.00
IUUC-Tvi-122385	Trichoderma virens	31.10	7.00e-73	268.00
IUUC-Tae-122836	Triticum aestivum	35.03	4.00e-150	525.00
IUUC-Tur-126490	Triticum urartu	31.34	2.00e-108	386.00
IUUC-Tme-127157	Tuber melanosporum	31.85	9.00e-107	381.00
IUUC-Tbe-127981	Tupaia belangeri	63.55	0.00e+00	1082.00
IUUC-Ttr-128886	Tursiops truncatus	68.23	0.00e+00	1233.00
IUUC-Uma-129439	Ustilago maydis	30.68	1.00e-102	367.00
IUUC-Vda-129760	Verticillium dahliae	31.83	2.00e-70	261.00
IUUC-Vpa-130456	Vicugna pacos	68.57	0.00e+00	1247.00
IUUC-Vvi-131086	Vitis vinifera	34.79	5.00e-150	525.00
IUUC-Xtr-131829	Xenopus tropicalis	70.26	0.00e+00	1285.00
IUUC-Xma-133588	Xiphophorus maculatus	58.30	0.00e+00	1018.00
IUUC-Yli-134328	Yarrowia lipolytica	30.87	5.00e-103	369.00
IUUC-Zma-135808	Zea mays	34.28	3.00e-150	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence