iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106774

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01079938

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000017476.1	ENSSHAT00000020771.1	ENSSHAP00000020606.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-15	56.2	153	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sGs Dg++++WDlrtg  +++
   Q: 153  GHTDYIHCLALreRSPEVLSGSEDGSVRLWDLRTGEEVQT 192
           8**********98559*******************99875 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MEVQRALERL HMTIFSQSVS PCGKFLAAGN NYGQIAIFSL SAALSSEAKE ESKKPVVTFV 60
AHDGPVYSLV STDRHLLSAG DGEVKAWLWG EIIKKGCKEV WSRHPPYRSS LEVPEINALL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTAC AGCGCGCCCT GGAGCGGCTG CACATGACCA TCTTCTCCCA GAGCGTTTCC 60
CCCTGTGGCA AGTTCTTAGC GGCAGGGAAC AACTACGGGC AGATTGCCAT CTTCAGGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

KEGG

shr:100928782

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	30.24	4.00e-31	128.00
IUUC-Aml-001693	Ailuropoda melanoleuca	91.77	3.00e-165	573.00
IUUC-Atr-002699	Amborella trichopoda	29.32	8.00e-24	104.00
IUUC-Aca-004231	Anolis carolinensis	74.16	2.00e-136	478.00
IUUC-Aly-006385	Arabidopsis lyrata	29.28	1.00e-30	126.00
IUUC-Ath-006723	Arabidopsis thaliana	29.04	4.00e-30	125.00
IUUC-Ame-010813	Astyanax mexicanus	67.44	7.00e-91	326.00
IUUC-Bta-013458	Bos taurus	91.16	4.00e-164	570.00
IUUC-Bdi-014935	Brachypodium distachyon	29.55	1.00e-30	127.00
IUUC-Bol-015442	Brassica oleracea	29.75	7.00e-30	124.00
IUUC-Bra-017807	Brassica rapa	28.84	8.00e-30	124.00
IUUC-Cja-019061	Callithrix jacchus	91.46	7.00e-164	569.00
IUUC-Cfa-021146	Canis familiaris	91.16	7.00e-165	572.00
IUUC-Cpo-022512	Cavia porcellus	91.13	8.00e-165	572.00
IUUC-Csa-023055	Chlorocebus sabaeus	91.13	4.00e-165	573.00
IUUC-Cho-024693	Choloepus hoffmanni	88.66	2.00e-91	327.00
IUUC-Cin-025181	Ciona intestinalis	36.96	3.00e-61	228.00
IUUC-Csv-025852	Ciona savignyi	35.67	1.00e-49	189.00
IUUC-Dre-028221	Danio rerio	61.80	6.00e-122	429.00
IUUC-Dno-029200	Dasypus novemcinctus	85.41	8.00e-81	292.00
IUUC-Dor-030863	Dipodomys ordii	90.21	3.00e-163	567.00
IUUC-Dme-032016	Drosophila melanogaster	29.91	2.00e-39	155.00
IUUC-Eca-034363	Equus caballus	91.16	2.00e-165	574.00
IUUC-Fca-036546	Felis catus	91.77	8.00e-166	575.00
IUUC-Gmo-038513	Gadus morhua	60.12	2.00e-111	395.00
IUUC-Gac-042606	Gasterosteus aculeatus	59.63	6.00e-116	410.00
IUUC-Gma-043171	Glycine max	29.53	2.00e-34	139.00
IUUC-Ggo-044877	Gorilla gorilla	92.05	1.00e-165	575.00
IUUC-Hsa-045813	Homo sapiens	91.44	1.00e-165	575.00
IUUC-Hvu-047782	Hordeum vulgare	31.76	4.00e-22	97.40
IUUC-Itr-047876	Ictidomys tridecemlineatus	91.44	3.00e-164	570.00
IUUC-Lch-049506	Latimeria chalumnae	68.69	4.00e-128	450.00
IUUC-Lpe-051203	Leersia perrieri	32.20	2.00e-27	116.00
IUUC-Loc-052451	Lepisosteus oculatus	53.99	4.00e-93	334.00
IUUC-Laf-053864	Loxodonta africana	90.55	9.00e-164	568.00
IUUC-Mcc-055705	Macaca mulatta	84.64	1.00e-146	512.00
IUUC-Meu-055926	Macropus eugenii	98.48	1.00e-170	591.00
IUUC-Mtr-058556	Medicago truncatula	30.03	2.00e-36	145.00
IUUC-Mmr-060836	Microcebus murinus	91.44	3.00e-165	573.00
IUUC-Mdo-062534	Monodelphis domestica	98.48	1.00e-169	588.00
IUUC-Mmu-063560	Mus musculus	90.52	2.00e-162	564.00
IUUC-Mac-065134	Musa acuminata	28.63	3.00e-28	119.00
IUUC-Mpu-066031	Mustela putorius furo	92.07	1.00e-166	578.00
IUUC-Mlu-068051	Myotis lucifugus	88.72	6.00e-159	552.00
IUUC-Nle-069080	Nomascus leucogenys	91.13	2.00e-164	571.00
IUUC-Opr-070787	Ochotona princeps	88.00	2.00e-155	541.00
IUUC-Ont-071952	Oreochromis niloticus	58.07	7.00e-114	403.00
IUUC-Oan-073334	Ornithorhynchus anatinus	93.05	5.00e-126	443.00
IUUC-Oba-075175	Oryza barthii	32.77	3.00e-28	119.00
IUUC-Obr-076393	Oryza brachyantha	33.33	4.00e-28	118.00
IUUC-Ogl-077603	Oryza glaberrima	37.29	1.00e-20	93.20
IUUC-Ogu-078211	Oryza glumaepatula	32.77	3.00e-28	119.00
IUUC-Oin-079554	Oryza indica	32.77	2.00e-28	119.00
IUUC-Olo-080922	Oryza longistaminata	33.76	1.00e-24	107.00
IUUC-Ome-081127	Oryza meridionalis	24.86	3.00e-14	72.80
IUUC-Oni-082376	Oryza nivara	32.77	3.00e-28	119.00
IUUC-Opu-083163	Oryza punctata	32.20	9.00e-28	117.00
IUUC-Oru-084311	Oryza rufipogon	32.77	4.00e-28	118.00
IUUC-Osa-085762	Oryza sativa	37.29	2.00e-20	92.80
IUUC-Oga-088804	Otolemur garnettii	91.13	1.00e-164	572.00
IUUC-Oar-090095	Ovis aries	90.85	9.00e-164	568.00
IUUC-Ptr-090731	Pan troglodytes	91.74	1.00e-165	575.00
IUUC-Pan-092595	Papio anubis	91.77	2.00e-164	571.00
IUUC-Psi-093866	Pelodiscus sinensis	75.25	4.00e-127	447.00
IUUC-Pma-094236	Petromyzon marinus	63.08	3.00e-121	427.00
IUUC-Pfo-096095	Poecilia formosa	59.94	9.00e-112	396.00
IUUC-Pab-098385	Pongo abelii	91.74	2.00e-165	574.00
IUUC-Pop-099433	Populus trichocarpa	29.07	2.00e-31	129.00
IUUC-Pca-101119	Procavia capensis	92.24	1.00e-113	402.00
IUUC-Ppe-101677	Prunus persica	29.44	8.00e-29	120.00
IUUC-Pva-102726	Pteropus vampyrus	92.07	2.00e-167	581.00
IUUC-Rno-105576	Rattus norvegicus	91.13	1.00e-163	568.00
IUUC-Sit-109988	Setaria italica	28.82	1.00e-29	124.00
IUUC-Sly-110864	Solanum lycopersicum	29.76	3.00e-28	119.00
IUUC-Sar-113060	Sorex araneus	83.65	1.00e-123	435.00
IUUC-Sbi-114699	Sorghum bicolor	29.89	2.00e-30	126.00
IUUC-Ssc-116445	Sus scrofa	91.77	3.00e-166	577.00
IUUC-Tru-117834	Takifugu rubripes	60.56	2.00e-118	418.00
IUUC-Tni-119651	Tetraodon nigroviridis	59.94	7.00e-118	416.00
IUUC-Tca-121318	Theobroma cacao	29.05	2.00e-29	122.00
IUUC-Tae-124184	Triticum aestivum	30.24	4.00e-31	128.00
IUUC-Tur-126226	Triticum urartu	32.20	2.00e-28	119.00
IUUC-Tbe-128079	Tupaia belangeri	78.28	3.00e-104	370.00
IUUC-Ttr-128391	Tursiops truncatus	87.23	8.00e-154	536.00
IUUC-Vvi-131148	Vitis vinifera	28.11	5.00e-27	115.00
IUUC-Xtr-132743	Xenopus tropicalis	65.44	7.00e-121	426.00
IUUC-Xma-133722	Xiphophorus maculatus	60.25	2.00e-116	412.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence