iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066294

Ensembl Protein ID

ENSMPUP00000006190.1

UniProt Accession

M3Y4D9; M3Y4D9_MUSPF

Genbank Protein ID

ENSMPUP00000006190

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01050316

Gene Name

CSTF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000006243.1	ENSMPUT00000006298.1	ENSMPUP00000006190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-14	53.2	266	303
UBD/Beta-Prp	8.20e-49	166.4	221	435

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +Htd ++++++ ++ ++ v+Gs Dg ik+WD  +++++
   Q: 266  QHTDAICSVNYnPSaNMYVTGSKDGCIKLWDGVSNRCI 303
           5**********9778888*************8888775 PP

UBD/Beta-Prp

   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++ ++++s+sf+psgd++++G+++ t+r++d++t qc+ +  ++++h++++++v+++p++n++v+Gs+D++++lWd  ++++++t++++
   Q: 221  EEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVScnPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKA 309
           67899***********************************99********************************************999 PP
   S: 179  htdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs....pnderlvsgssDgsiri..Wdlrsgdllktl 260
           h+++  + + f++n+k+++s ++d+  klw+++tg+++++++g     ++v+ +    +++e +v   ++++i++  Wd+r+ +  + l
   Q: 310  HDGAEVCSAiFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTqavfNHTEDYVLLPDERTISLccWDSRTAERRNLL 398
           9998777666***********************************99999888877789**************9888************ PP
   S: 261  qlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
           +l +++++ + v+s++++ ++++s+d ++++w  +++
   Q: 399  SLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRST 435
           ********************************98765 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MYRTKVGLKD RQQLYKLIIS QLLYDGYISI ANGLINEIKP QSVCAPSEQL LHLIKLGSFE 60
CRFIDSVTRF PMFSQSELFK IIFVLDTERV SRLQGSSLKL CCGSIFKNCN KGPEEFHSTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACAGAA CCAAAGTGGG CTTGAAGGAC CGCCAGCAGC TCTACAAGCT GATCATTAGC 60
CAGCTGCTCT ATGATGGCTA CATCAGCATT GCTAATGGCC TCATTAATGA AATCAAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032028--CSTF1_dimer
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16699--CSTF1_dimer
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	68.02	5.00e-164	570.00
IUUC-Atr-002687	Amborella trichopoda	48.51	1.00e-34	140.00
IUUC-Apl-003438	Anas platyrhynchos	66.67	1.00e-160	559.00
IUUC-Aca-005178	Anolis carolinensis	65.77	2.00e-159	555.00
IUUC-Aly-005791	Arabidopsis lyrata	45.02	4.00e-53	201.00
IUUC-Ath-006689	Arabidopsis thaliana	45.97	2.00e-53	203.00
IUUC-Ame-011217	Astyanax mexicanus	90.32	1.00e-120	425.00
IUUC-Bta-012619	Bos taurus	68.02	7.00e-164	570.00
IUUC-Bdi-014515	Brachypodium distachyon	47.62	6.00e-54	204.00
IUUC-Bra-017450	Brassica rapa	41.35	2.00e-49	189.00
IUUC-Cel-018151	Caenorhabditis elegans	38.24	7.00e-83	300.00
IUUC-Cja-019304	Callithrix jacchus	67.79	4.00e-163	567.00
IUUC-Cfa-020208	Canis familiaris	68.02	5.00e-164	570.00
IUUC-Cpo-022245	Cavia porcellus	68.02	5.00e-164	570.00
IUUC-Csa-023066	Chlorocebus sabaeus	67.79	4.00e-163	567.00
IUUC-Cho-024770	Choloepus hoffmanni	77.08	2.00e-132	465.00
IUUC-Cin-025621	Ciona intestinalis	59.36	3.00e-81	295.00
IUUC-Csv-026071	Ciona savignyi	42.12	6.00e-97	347.00
IUUC-Dre-028254	Danio rerio	60.09	4.00e-143	501.00
IUUC-Dno-029903	Dasypus novemcinctus	68.02	5.00e-164	570.00
IUUC-Dor-030423	Dipodomys ordii	67.79	8.00e-164	569.00
IUUC-Dme-031993	Drosophila melanogaster	55.26	5.00e-76	278.00
IUUC-Ete-032689	Echinops telfairi	100.00	2.00e-49	189.00
IUUC-Eca-033316	Equus caballus	67.79	1.00e-163	568.00
IUUC-Eeu-035001	Erinaceus europaeus	64.64	4.00e-155	541.00
IUUC-Fca-036447	Felis catus	68.02	5.00e-164	570.00
IUUC-Fal-037601	Ficedula albicollis	66.67	1.00e-160	559.00
IUUC-Gmo-038531	Gadus morhua	59.73	8.00e-141	493.00
IUUC-Gga-040869	Gallus gallus	66.44	4.00e-160	557.00
IUUC-Gac-042380	Gasterosteus aculeatus	59.82	2.00e-141	495.00
IUUC-Gma-043478	Glycine max	43.46	9.00e-51	194.00
IUUC-Ggo-045302	Gorilla gorilla	67.79	4.00e-163	567.00
IUUC-Hsa-045678	Homo sapiens	67.79	4.00e-163	567.00
IUUC-Hvu-047301	Hordeum vulgare	47.69	7.00e-55	207.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	68.02	5.00e-164	570.00
IUUC-Lch-050319	Latimeria chalumnae	63.29	7.00e-153	533.00
IUUC-Lpe-051440	Leersia perrieri	40.62	3.00e-45	176.00
IUUC-Loc-052035	Lepisosteus oculatus	60.36	4.00e-145	507.00
IUUC-Laf-054275	Loxodonta africana	68.02	5.00e-164	570.00
IUUC-Mcc-055857	Macaca mulatta	99.54	6.00e-131	460.00
IUUC-Meu-056194	Macropus eugenii	100.00	6.00e-23	101.00
IUUC-Mtr-058667	Medicago truncatula	43.46	1.00e-48	187.00
IUUC-Mga-059710	Meleagris gallopavo	66.44	4.00e-160	557.00
IUUC-Mmr-060604	Microcebus murinus	68.02	5.00e-164	570.00
IUUC-Mdo-062953	Monodelphis domestica	67.57	1.00e-162	566.00
IUUC-Mmu-064292	Mus musculus	67.79	7.00e-164	570.00
IUUC-Mac-064568	Musa acuminata	44.91	8.00e-51	193.00
IUUC-Mlu-067995	Myotis lucifugus	67.34	3.00e-161	561.00
IUUC-Nle-069322	Nomascus leucogenys	67.79	4.00e-163	567.00
IUUC-Opr-070580	Ochotona princeps	67.79	3.00e-163	568.00
IUUC-Ont-072554	Oreochromis niloticus	61.21	4.00e-146	511.00
IUUC-Oan-072856	Ornithorhynchus anatinus	67.34	2.00e-162	565.00
IUUC-Ocu-074150	Oryctolagus cuniculus	56.18	6.00e-121	427.00
IUUC-Oba-075585	Oryza barthii	46.94	1.00e-48	187.00
IUUC-Obr-076069	Oryza brachyantha	44.44	2.00e-49	189.00
IUUC-Ogl-077045	Oryza glaberrima	45.21	8.00e-54	204.00
IUUC-Ogu-078697	Oryza glumaepatula	47.74	8.00e-51	196.00
IUUC-Oin-080119	Oryza indica	45.21	8.00e-54	204.00
IUUC-Olo-081093	Oryza longistaminata	38.81	5.00e-37	150.00
IUUC-Ome-081718	Oryza meridionalis	37.56	8.00e-40	158.00
IUUC-Oni-082072	Oryza nivara	46.94	1.00e-48	187.00
IUUC-Opu-084080	Oryza punctata	38.03	1.00e-40	160.00
IUUC-Oru-085070	Oryza rufipogon	46.39	1.00e-47	186.00
IUUC-Osa-086149	Oryza sativa	45.21	8.00e-54	204.00
IUUC-Ola-086697	Oryzias latipes	60.99	3.00e-146	511.00
IUUC-Oga-088697	Otolemur garnettii	68.02	5.00e-164	570.00
IUUC-Oar-089774	Ovis aries	68.02	6.00e-164	570.00
IUUC-Ptr-090924	Pan troglodytes	67.79	4.00e-163	567.00
IUUC-Pan-092373	Papio anubis	67.79	7.00e-163	566.00
IUUC-Psi-094001	Pelodiscus sinensis	66.44	4.00e-160	557.00
IUUC-Pma-094274	Petromyzon marinus	48.53	4.00e-116	411.00
IUUC-Ppa-095562	Physcomitrella patens	43.19	5.00e-50	191.00
IUUC-Pfo-097235	Poecilia formosa	61.21	4.00e-146	510.00
IUUC-Pab-098608	Pongo abelii	67.79	4.00e-163	567.00
IUUC-Pca-100268	Procavia capensis	68.02	7.00e-164	570.00
IUUC-Ppe-101425	Prunus persica	47.39	5.00e-53	201.00
IUUC-Pva-103183	Pteropus vampyrus	68.02	5.00e-164	570.00
IUUC-Rno-105097	Rattus norvegicus	67.79	7.00e-164	570.00
IUUC-Sha-107642	Sarcophilus harrisii	67.57	1.00e-162	566.00
IUUC-Smo-108680	Selaginella moellendorffii	42.65	9.00e-50	191.00
IUUC-Sit-110471	Setaria italica	45.37	4.00e-54	206.00
IUUC-Stu-111926	Solanum tuberosum	44.72	3.00e-33	134.00
IUUC-Sar-112947	Sorex araneus	67.91	4.00e-77	281.00
IUUC-Sbi-113769	Sorghum bicolor	44.91	5.00e-52	198.00
IUUC-Ssc-115736	Sus scrofa	68.02	5.00e-164	570.00
IUUC-Tgu-117457	Taeniopygia guttata	66.67	1.00e-160	559.00
IUUC-Tru-117760	Takifugu rubripes	60.99	7.00e-146	509.00
IUUC-Tsy-118943	Tarsius syrichta	68.02	2.00e-163	568.00
IUUC-Tni-120081	Tetraodon nigroviridis	61.43	1.00e-146	512.00
IUUC-Tca-121190	Theobroma cacao	47.87	7.00e-54	204.00
IUUC-Tae-125535	Triticum aestivum	48.15	2.00e-56	212.00
IUUC-Tur-126329	Triticum urartu	48.15	7.00e-56	211.00
IUUC-Tbe-127878	Tupaia belangeri	66.82	2.00e-157	548.00
IUUC-Ttr-128985	Tursiops truncatus	68.02	5.00e-164	570.00
IUUC-Vpa-130147	Vicugna pacos	67.79	3.00e-163	567.00
IUUC-Vvi-130935	Vitis vinifera	46.92	3.00e-53	202.00
IUUC-Xtr-132482	Xenopus tropicalis	63.74	4.00e-153	534.00
IUUC-Xma-133929	Xiphophorus maculatus	61.21	4.00e-146	510.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence