iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000012870.3	ENSXETT00000028145.2	ENSXETP00000028145.2
ENSXETG00000012870.3	ENSXETT00000028153.2	ENSXETP00000028153.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-08	35.3	274	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H+ds t++a  ++ +  +s++ D++ik+ Dl++
   Q: 274  HKDSLTSIAIsQSlGKAASCG-DNVIKIHDLTE 305
           9*********87678877776.99******986 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

LQRVFSLTEK SLLGYPIHYA WQRNLGNYIA VTGVDHTVKI YDRHGQKKDE INLPGVCFAL 60
DWDKDGNALA MVADKSSSIY MWDPNTCKTS QLDSGMRDQM SFLLWSKAGS LLAVGTSKGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCAGCGTG TATTTTCTTT GACAGAAAAG AGCTTGCTGG GATATCCAAT CCATTATGCC 60
TGGCAGAGGA ATTTAGGAAA TTACATTGCA GTTACAGGGT AGGTTAATAT GGAGACTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005929--C:cilium
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018591	Caenorhabditis elegans	37.31	0.00e+00	924.00
IUUC-Cpo-021608	Cavia porcellus	74.22	0.00e+00	2043.00
IUUC-Dre-028191	Danio rerio	72.16	0.00e+00	2021.00
IUUC-Dme-031961	Drosophila melanogaster	39.20	0.00e+00	981.00
IUUC-Gmo-039202	Gadus morhua	77.67	0.00e+00	1013.00
IUUC-Gac-041476	Gasterosteus aculeatus	61.89	0.00e+00	1774.00
IUUC-Lch-049609	Latimeria chalumnae	73.21	0.00e+00	645.00
IUUC-Loc-052919	Lepisosteus oculatus	74.59	0.00e+00	2095.00
IUUC-Mga-060030	Meleagris gallopavo	74.09	0.00e+00	2071.00
IUUC-Mpu-066840	Mustela putorius furo	75.62	0.00e+00	2078.00
IUUC-Oan-073422	Ornithorhynchus anatinus	64.11	2.00e-177	614.00
IUUC-Ocu-073906	Oryctolagus cuniculus	74.22	0.00e+00	2056.00
IUUC-Ola-086596	Oryzias latipes	63.33	0.00e+00	1764.00
IUUC-Rno-105208	Rattus norvegicus	74.50	0.00e+00	2068.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence