iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130878

UUCD1 version

UUC-ViV-00411

Ensembl Protein ID

VIT_17s0000g09750.t01

UniProt Accession

F6GTQ1; F6GTQ1_VITVI

Genbank Protein ID

CCB42917.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g09750

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g09750	VIT_17s0000g09750.t01	VIT_17s0000g09750.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	89.1	316	353
UBD/Beta-Prp	2.50e-49	168.6	232	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH d+v++++    s+++++s+++D tikvWDl +g +
   Q: 316  GHMDKVCSVDVskiSSRHVASAAYDRTIKVWDLQKGYC 353
           8*********999977****************988865 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           +h++ + ++ f  ++  l++g+ d+ +k wd+ tg+l r+l+g+ + v ++ + +d   ++ +s+ ++++vwd+++g + htl+gh d
   Q: 232  AHEGGCAAILFEYNSGNLISGGHDRAVKMWDTNTGSLTRTLYGCVGSVLDLAITHDNRSIIAASSSNNLCVWDVNSGRIRHTLTGHMD 319
           67788889999666666999999***************************************************************** PP
   S: 96   svlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           +v+s+++s+ s+ +++s+  drti+vwdl++g+c++++   h +  n ++++ dg+ + sG+ D+ +rlWd++tgkll +    h  +
   Q: 320  KVCSVDVSKiSSRHVASAAYDRTIKVWDLQKGYCINTIIF-H-SNCNALCFSTDGQTICSGHVDGNLRLWDIQTGKLLSEVAA-HSLA 404
           *********777***********************94333.3.347889999999**************************98.**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
           ++s+s+++ng  +++ ++d+  +l+d+++ e+  tl++  + v
   Q: 405  ITSISLSRNGSVVLTSGRDNLHNLFDMRSLEVCGTLRANGNRV 447
           ***********************************99988776 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MENRGKEKEL SQDEVAVDAI KHALKALRKR HLLEEGAHAP AIVALSKPFI YQGSEWKDKA 60
ENLEVELQQC YRAQARLSEQ LVVEVAECRA SKALVQEKEA IINDIQNELT KTRDECLQLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAATA GAGGAAAAGA GAAGGAATTG TTGGATTCAT ATGTTTCTTT TGTGTACGGA 60
TTGAAAAATC TTAAGTGATT TGGGTGAAGT ATTTGTACTT GTGTTCGTTT TACCGGGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	51.21	4.00e-140	490.00
IUUC-Aml-002242	Ailuropoda melanoleuca	33.12	7.00e-40	157.00
IUUC-Atr-003073	Amborella trichopoda	62.82	3.00e-156	544.00
IUUC-Apl-003384	Anas platyrhynchos	35.95	1.00e-48	186.00
IUUC-Aca-004962	Anolis carolinensis	35.67	7.00e-47	181.00
IUUC-Aly-005435	Arabidopsis lyrata	69.82	0.00e+00	745.00
IUUC-Ath-006948	Arabidopsis thaliana	69.16	0.00e+00	754.00
IUUC-Ame-010915	Astyanax mexicanus	34.64	4.00e-41	160.00
IUUC-Bta-012388	Bos taurus	33.55	1.00e-45	176.00
IUUC-Bdi-014231	Brachypodium distachyon	52.84	5.00e-149	520.00
IUUC-Bol-016174	Brassica oleracea	70.33	0.00e+00	741.00
IUUC-Bra-017165	Brassica rapa	69.23	0.00e+00	740.00
IUUC-Cel-018234	Caenorhabditis elegans	26.41	1.00e-28	120.00
IUUC-Cja-020002	Callithrix jacchus	29.87	1.00e-32	133.00
IUUC-Cfa-020484	Canis familiaris	33.66	2.00e-45	176.00
IUUC-Cpo-022156	Cavia porcellus	33.11	3.00e-44	172.00
IUUC-Csa-024019	Chlorocebus sabaeus	29.20	2.00e-50	192.00
IUUC-Cho-024311	Choloepus hoffmanni	36.54	8.00e-35	140.00
IUUC-Cin-025260	Ciona intestinalis	32.72	7.00e-36	144.00
IUUC-Dre-027702	Danio rerio	34.33	4.00e-47	181.00
IUUC-Dno-029728	Dasypus novemcinctus	34.53	2.00e-46	179.00
IUUC-Dor-030897	Dipodomys ordii	30.10	2.00e-38	152.00
IUUC-Dme-031595	Drosophila melanogaster	31.19	2.00e-37	149.00
IUUC-Ete-032969	Echinops telfairi	32.41	4.00e-44	171.00
IUUC-Eca-034214	Equus caballus	35.25	3.00e-42	165.00
IUUC-Eeu-034537	Erinaceus europaeus	32.01	5.00e-37	147.00
IUUC-Fca-036005	Felis catus	33.00	1.00e-44	173.00
IUUC-Fal-037593	Ficedula albicollis	35.83	7.00e-49	187.00
IUUC-Gmo-039042	Gadus morhua	24.64	2.00e-38	152.00
IUUC-Gga-040986	Gallus gallus	35.18	3.00e-48	185.00
IUUC-Gac-041351	Gasterosteus aculeatus	26.08	2.00e-49	189.00
IUUC-Gma-043452	Glycine max	77.17	0.00e+00	833.00
IUUC-Ggo-045427	Gorilla gorilla	34.64	8.00e-46	177.00
IUUC-Hsa-046632	Homo sapiens	34.64	1.00e-45	177.00
IUUC-Hvu-047655	Hordeum vulgare	52.10	2.00e-117	415.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	27.86	4.00e-49	188.00
IUUC-Lpe-051254	Leersia perrieri	55.01	1.00e-151	528.00
IUUC-Loc-052610	Lepisosteus oculatus	33.99	2.00e-48	186.00
IUUC-Lma-053185	Leptosphaeria maculans	29.67	9.00e-27	114.00
IUUC-Laf-053936	Loxodonta africana	32.33	6.00e-45	174.00
IUUC-Mcc-055504	Macaca mulatta	34.97	5.00e-46	178.00
IUUC-Meu-056516	Macropus eugenii	34.20	1.00e-46	180.00
IUUC-Mtr-058062	Medicago truncatula	73.17	0.00e+00	771.00
IUUC-Mga-059777	Meleagris gallopavo	35.39	6.00e-47	181.00
IUUC-Mmr-061298	Microcebus murinus	33.77	4.00e-46	178.00
IUUC-Mdo-062969	Monodelphis domestica	34.20	8.00e-47	181.00
IUUC-Mmu-064076	Mus musculus	33.44	2.00e-46	179.00
IUUC-Mac-065161	Musa acuminata	64.69	5.00e-179	619.00
IUUC-Mpu-066196	Mustela putorius furo	33.33	3.00e-45	176.00
IUUC-Mlu-067651	Myotis lucifugus	34.20	2.00e-45	176.00
IUUC-Nle-069853	Nomascus leucogenys	33.66	3.00e-43	169.00
IUUC-Opr-071039	Ochotona princeps	30.43	2.00e-38	152.00
IUUC-Ont-072489	Oreochromis niloticus	35.18	4.00e-49	188.00
IUUC-Oan-072703	Ornithorhynchus anatinus	32.67	3.00e-45	175.00
IUUC-Ocu-074205	Oryctolagus cuniculus	33.44	2.00e-45	176.00
IUUC-Oba-075619	Oryza barthii	55.01	3.00e-154	537.00
IUUC-Obr-076632	Oryza brachyantha	53.75	2.00e-147	514.00
IUUC-Ogl-077671	Oryza glaberrima	54.37	3.00e-154	537.00
IUUC-Ogu-078052	Oryza glumaepatula	55.01	7.00e-154	536.00
IUUC-Oin-079611	Oryza indica	55.21	3.00e-151	527.00
IUUC-Olo-080408	Oryza longistaminata	55.01	8.00e-142	496.00
IUUC-Ome-081560	Oryza meridionalis	55.01	1.00e-153	535.00
IUUC-Oni-082145	Oryza nivara	55.01	3.00e-154	537.00
IUUC-Opu-083918	Oryza punctata	54.81	3.00e-142	498.00
IUUC-Oru-084858	Oryza rufipogon	55.21	2.00e-151	528.00
IUUC-Osa-086277	Oryza sativa	55.21	3.00e-151	527.00
IUUC-Ola-086964	Oryzias latipes	35.74	8.00e-41	159.00
IUUC-Olu-087622	Ostreococcus lucimarinus	32.79	4.00e-63	234.00
IUUC-Oga-088765	Otolemur garnettii	28.02	2.00e-50	192.00
IUUC-Oar-090196	Ovis aries	34.15	1.00e-43	170.00
IUUC-Ptr-091676	Pan troglodytes	34.64	7.00e-46	177.00
IUUC-Pan-092068	Papio anubis	34.97	5.00e-46	178.00
IUUC-Psi-093367	Pelodiscus sinensis	35.31	3.00e-50	192.00
IUUC-Ppa-095699	Physcomitrella patens	49.80	2.00e-142	498.00
IUUC-Pfo-096067	Poecilia formosa	33.88	6.00e-47	181.00
IUUC-Pab-098111	Pongo abelii	34.64	1.00e-45	176.00
IUUC-Pop-099116	Populus trichocarpa	81.18	0.00e+00	854.00
IUUC-Pca-100680	Procavia capensis	34.67	1.00e-34	140.00
IUUC-Ppe-101790	Prunus persica	78.90	0.00e+00	840.00
IUUC-Pva-102871	Pteropus vampyrus	33.00	5.00e-45	174.00
IUUC-Pgr-103597	Puccinia graminis	29.55	3.00e-27	116.00
IUUC-Rno-106088	Rattus norvegicus	33.11	2.00e-46	179.00
IUUC-Sha-106984	Sarcophilus harrisii	33.88	6.00e-47	181.00
IUUC-Smo-108983	Selaginella moellendorffii	50.71	9.00e-142	496.00
IUUC-Sit-110828	Setaria italica	55.74	5.00e-154	536.00
IUUC-Sly-111009	Solanum lycopersicum	75.96	0.00e+00	760.00
IUUC-Stu-112370	Solanum tuberosum	76.03	0.00e+00	833.00
IUUC-Sar-113109	Sorex araneus	33.01	8.00e-25	107.00
IUUC-Sbi-114819	Sorghum bicolor	54.71	1.00e-150	525.00
IUUC-Ssc-116241	Sus scrofa	33.88	1.00e-40	160.00
IUUC-Tgu-116576	Taeniopygia guttata	35.95	2.00e-48	186.00
IUUC-Tru-118336	Takifugu rubripes	29.97	9.00e-36	144.00
IUUC-Tsy-119006	Tarsius syrichta	34.11	4.00e-46	178.00
IUUC-Tni-120300	Tetraodon nigroviridis	33.88	2.00e-46	179.00
IUUC-Tca-121002	Theobroma cacao	79.37	0.00e+00	837.00
IUUC-Tae-124868	Triticum aestivum	51.41	7.00e-141	493.00
IUUC-Tur-126463	Triticum urartu	51.21	4.00e-140	491.00
IUUC-Tbe-127631	Tupaia belangeri	33.77	1.00e-45	176.00
IUUC-Ttr-129005	Tursiops truncatus	34.25	6.00e-38	151.00
IUUC-Xtr-132798	Xenopus tropicalis	32.04	1.00e-36	147.00
IUUC-Xma-133264	Xiphophorus maculatus	33.33	2.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence