iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014353.3	ENSXETT00000031409.3	ENSXETP00000031409.3
ENSXETG00000014353.3	ENSXETT00000031397.3	ENSXETP00000031397.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-23	79.8	614	652

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t+++WDlr+g++l+
   Q: 614  GHTDGASCIDIsHDgTKLWTGGLDNTVRCWDLREGRQLQ 652
           8**********9888*********************998 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MFPQNRPPTH LQASVAAGAA SGPPQSLKLT YPETLDRIKE EFQFLQSQYH SLKLECEKLA 60
TEKTEIQRHY VMYYEMSYGL NIEMHKQTEI AKRLNVICAQ LVPFLSQEHQ QQVVQAVERA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGCTGAT TGAGCCGGAG GGAGGGGCTG CACCGAGCAC CGGGAGACTG GGCCCGACTG 60
GAGATCGGCT CCTCCTACCC TCGGGGTCCG GTAAGAGAGT TGGGGAGCGC TGTGCAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010668	Astyanax mexicanus	75.78	0.00e+00	813.00
IUUC-Cel-018361	Caenorhabditis elegans	57.45	6.00e-120	424.00
IUUC-Dre-028293	Danio rerio	75.22	0.00e+00	806.00
IUUC-Fal-036893	Ficedula albicollis	81.74	0.00e+00	1149.00
IUUC-Gac-042241	Gasterosteus aculeatus	68.29	0.00e+00	955.00
IUUC-Ont-071448	Oreochromis niloticus	76.84	0.00e+00	826.00
IUUC-Pfo-096291	Poecilia formosa	77.21	0.00e+00	818.00
IUUC-Tru-118532	Takifugu rubripes	76.78	0.00e+00	818.00
IUUC-Tni-119942	Tetraodon nigroviridis	75.76	0.00e+00	787.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence