iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017670

Ensembl Protein ID

Bra003910.1-P

UniProt Accession

M4CI77; M4CI77_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003910	Bra003910.1	Bra003910.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-36	122.6	298	334
UBD/Beta-Prp	9.60e-57	193.4	212	371

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+++vtc+++  ++++l++G++Dgt+ vWD   g+++
   Q: 298  HAEGVTCVSWigTSKYLATGCGDGTVSVWDSLLGNCV 334
           999********755****************7666665 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqcleetlsghdgvvncv 143
           h+++  ++++++++++ ++gs+D+ +++ ++ tgk v++l+ h++sv +++fsp   +    ++G+ d+ + +wdl++ +    +  +h + v+cv
   Q: 212  HTEGLICLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLSSHTESVECVKFSPssaTIPMAATGGMDKKLVIWDLQHSTPR--FICEHAEGVTCV 305
           888999************************************************77555888*****************998..689999****** PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           ++ +++++l++G+ D+tv +Wd+  g++++t  g h+d+v+s+s++ n +++vs+s d t +++d +
   Q: 306  SWIGTSKYLATGCGDGTVSVWDSLLGNCVHTYHG-HQDAVQSISVSANTEFIVSVSVDHTARVYDTS 371
           *********************************9.******************************87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSNRDMNNPA MEEEDEGDVF LGESDVLHEI DVDGEDLPDA FDEDDNDNDN EDEVFDENDD 60
SVHTFTGHKG ELYALACSPL DPTLVATGGG DDKAFLWKIG NGDWAAELPA HKDSVSSLAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTAACA GGGATATGAA TAATCCAGCA ATGGAAGAAG AAGATGAGGG AGACGTTTTC 60
CTCGGCGAAT CCGATGTCCT CCATGAAATC GATGTCGACG GAGAAGGTTT CTCCTCTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011651	Astyanax mexicanus	27.04	3.00e-35	142.00
IUUC-Bol-015313	Brassica oleracea	91.13	0.00e+00	679.00
IUUC-Dre-028528	Danio rerio	31.14	4.00e-42	165.00
IUUC-Loc-052406	Lepisosteus oculatus	30.59	1.00e-44	173.00
IUUC-Pva-102400	Pteropus vampyrus	26.86	1.00e-32	134.00
IUUC-Ssc-116045	Sus scrofa	26.80	1.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence