iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131996

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01012725

Gene Name

traf7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000015971.3	ENSXETT00000034856.3	ENSXETP00000034856.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-21	75.6	376	407
UBD/Beta-Prp	1.50e-55	188.6	375	589

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH+++v+cl+      +ll sGs D+tikvWD+
   Q: 376  GHQGPVWCLCVysiG-DLLFSGSSDKTIKVWDT 407
           8********965643.89**************6 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdv.ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
            gh+   + c+++   ++ll++gs d+tikvwd+ tt k+ ++l+gh++ v a++++ +   l +gs D ti vwd++t   v t+++h
   Q: 375  VGHQGP-VWCLCVYSIGDLLFSGSSDKTIKVWDTcTTYKCQKTLEGHDGIVLALCIQGS--KLYSGSADCTIIVWDIQTLLKVNTIRAH 460
           444444.4447777888888888888888888863555667778888888888888877..5888888888888888888888888888 PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           ++ v++l +s   + l sGs  + i+vwd+  t+ +l++ l+g +++v+ +v ++  n+l sGs+ +t+++Wd++t ++ + l+    +
   Q: 461  DNPVCTLVSSH--NMLFSGS-LKAIKVWDIvGTDLKLKKELTGLNHWVRALVASQ--NYLYSGSY-QTIKIWDIRTLECAHVLQT-SGG 542
           88888877777..7788887.7888888853577777778888888888888877..88888887.5788888888888888877.888 PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           svys++++    ++v g + + + +wd++++e vrtl+gh  +v+ +++
   Q: 543  SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAV 589
           888888887..67888888888888888888888888888888877766 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

TPETRQTRME TTFGPAFSAV TTITKADGTK HRRTPSTSST LAFSPRDEDD VMPPISTPRR 60
SDSAISVRSL HSESTMSLRS TFSLHEEEEE PTAWYALLYN RPTYSVHGSA LYCVVTAIPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACCTGAAA CAAGACAGTG AGTTGGTTCC TCTGCATGTG ATACTAGTGC CCTCACCCTA 60
ATTAGGGAAT GAGTTACTCA CCTTTCCAAA GAAGCCTTCG CCCAACACCT TTCCCAGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR008974--TRAF-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001293--Znf_TRAF

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50145--ZF_TRAF

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence