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Tag Content
UUCD2 ID IUUC-Dre-028492
UUCD1 version UUC-DaR-00723
Ensembl Protein ID ENSDARP00000018714.6
UniProt Accession F1QH82; F1QH82_DANRE
Genbank Protein ID ENSDARP00000018714
Protein Name WD repeat-containing protein 55
Genbank Nucleotide ID BX957298
Gene Name wdr55
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000007217.7 ENSDART00000003962.6 ENSDARP00000018714.6
ENSDARG00000007217.7 ENSDART00000161816.1 ENSDARP00000131643.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-24 86.4 123 156
UBD/Beta-Prp 1.00e-41 144.0 76 323
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
    H+++++++ + +++++++G d gt+kvWD+r+g+
   Q: 123 HKAPINAMLLiDENIFATGDDEGTLKVWDMRKGT 156
    9999***9777779****************9985 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
    ++ghh + +++v fs d++ l++ s+d+ i + dv+ gkl ++ + h+a+++a+ ++++ i++tg + +t+kvwd+++g+ ++ lk
   Q: 76 SSGHHLKSCRKVLFSSDGQKLFSVSKDKAIHIMDVEAGKLETRIpKAHKAPINAMLLIDEN-IFATGDDEGTLKVWDMRKGTSFMDLKH 163
    579*****************************************9***************6.*************************** PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgght 180
    hed++ ++++++ + +l++ s d t+ v++++ + + ++++g ++v++++ g+ +v Gs +t+ +++ +g +++ +
   Q: 164 HEDYISDITIDQAKRTLLTSSGDGTLGVFNIKRRRFEL-LSEIQNGDLTSVSIMKRGRKVVCGSGEGTIYIFNWnGFGATSDRFAV-QA 250
    **********************************9999.********************************999779*******87.9* PP
   S: 181 dsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrs 253
    +sv ++ +++ l ++s+dg ++ ++ +++v + h + + ++ ++++++l+s+++D+ i++Wd+ s
   Q: 251 ESVDCIVpITD--SILCAASTDGVIRAINILPNRVVGSIGQHVgEAIEEIARCRDTHFLASCAHDELIKFWDISS 323
    ******96555..5999********************9999986899************************9876 PP
   

Organism Danio rerio
Protein Sequence
(Fasta)
MATPTEHEDL SEQEVTEDEF KTPKIRETPE DIKLEAIVNT IAFHPKQDIL AAGDIDGDIY 60
LFSYSCTEGE NKELWSSGHH LKSCRKVLFS SDGQKLFSVS KDKAIHIMDV EAGKLETRIP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Dre-028492|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGTTTTTAA ATAGTCCATC CACTTTCACG TTGTTTTATT ACCGATTTCA ACCCATACGT 60
TTCAACCGCA CTGTTGTCCG CTCCAGTCCA GCAGGTGGCA GAAGATAACT ATTTAGCCTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Dre-028492|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000562 Aegilops tauschii 34.32 1.00e-48 187.00
IUUC-Aml-001768 Ailuropoda melanoleuca 63.89 6.00e-138 485.00
IUUC-Atr-002764 Amborella trichopoda 35.76 6.00e-24 103.00
IUUC-Apl-003880 Anas platyrhynchos 61.06 5.00e-108 385.00
IUUC-Aca-005060 Anolis carolinensis 68.02 4.00e-143 502.00
IUUC-Aly-006484 Arabidopsis lyrata 32.34 1.00e-43 170.00
IUUC-Ath-006652 Arabidopsis thaliana 37.33 2.00e-54 206.00
IUUC-Ago-007944 Ashbya gossypii 21.82 8.00e-10 58.90
IUUC-Acl-008007 Aspergillus clavatus 21.93 2.00e-09 57.40
IUUC-Bta-013497 Bos taurus 64.07 2.00e-134 472.00
IUUC-Bdi-014378 Brachypodium distachyon 37.89 6.00e-56 211.00
IUUC-Bol-016352 Brassica oleracea 37.29 2.00e-55 209.00
IUUC-Bra-017103 Brassica rapa 37.63 3.00e-56 212.00
IUUC-Cel-018192 Caenorhabditis elegans 25.67 8.00e-18 84.70
IUUC-Cja-018792 Callithrix jacchus 66.18 1.00e-136 479.00
IUUC-Cfa-020739 Canis familiaris 65.16 6.00e-138 484.00
IUUC-Cpo-022331 Cavia porcellus 66.09 2.00e-136 479.00
IUUC-Cre-022921 Chlamydomonas reinhardtii 38.30 4.00e-38 150.00
IUUC-Csa-023414 Chlorocebus sabaeus 62.78 4.00e-135 474.00
IUUC-Cho-024600 Choloepus hoffmanni 64.31 1.00e-129 455.00
IUUC-Cin-025565 Ciona intestinalis 38.67 5.00e-64 238.00
IUUC-Csv-026294 Ciona savignyi 39.13 5.00e-65 241.00
IUUC-Cne-026979 Cryptococcus neoformans 31.96 1.00e-41 163.00
IUUC-Cme-027192 Cyanidioschyzon merolae 25.47 2.00e-21 96.70
IUUC-Dno-030050 Dasypus novemcinctus 63.82 4.00e-127 449.00
IUUC-Dor-030386 Dipodomys ordii 55.99 8.00e-111 393.00
IUUC-Dse-031203 Dothistroma septosporum 25.56 1.00e-12 67.80
IUUC-Dme-032012 Drosophila melanogaster 36.96 7.00e-59 221.00
IUUC-Ete-032491 Echinops telfairi 66.27 2.00e-134 472.00
IUUC-Eca-033583 Equus caballus 64.87 2.00e-135 476.00
IUUC-Eeu-034976 Erinaceus europaeus 67.32 6.00e-121 427.00
IUUC-Fca-036417 Felis catus 65.58 4.00e-134 471.00
IUUC-Gmo-039505 Gadus morhua 76.63 7.00e-156 543.00
IUUC-Ggr-039978 Gaeumannomyces graminis 22.92 6.00e-14 72.00
IUUC-Gga-040732 Gallus gallus 63.50 3.00e-132 464.00
IUUC-Gac-041313 Gasterosteus aculeatus 73.67 4.00e-148 517.00
IUUC-Gma-044122 Glycine max 37.63 3.00e-57 215.00
IUUC-Ggo-044748 Gorilla gorilla 63.61 6.00e-136 477.00
IUUC-Hsa-046943 Homo sapiens 63.33 3.00e-135 474.00
IUUC-Hvu-047659 Hordeum vulgare 37.54 1.00e-54 207.00
IUUC-Itr-048110 Ictidomys tridecemlineatus 66.47 5.00e-136 477.00
IUUC-Kpa-049408 Komagataella pastoris 25.11 3.00e-11 63.50
IUUC-Lch-050331 Latimeria chalumnae 64.24 1.00e-119 422.00
IUUC-Lpe-051193 Leersia perrieri 39.79 3.00e-61 229.00
IUUC-Loc-051946 Lepisosteus oculatus 75.59 2.00e-151 530.00
IUUC-Lma-052960 Leptosphaeria maculans 24.67 2.00e-11 63.50
IUUC-Laf-054035 Loxodonta africana 65.99 2.00e-135 475.00
IUUC-Mcc-055285 Macaca mulatta 65.70 2.00e-59 221.00
IUUC-Meu-056596 Macropus eugenii 64.04 2.00e-131 462.00
IUUC-Mor-056995 Magnaporthe oryzae 28.84 6.00e-17 82.00
IUUC-Mtr-058637 Medicago truncatula 38.05 8.00e-58 218.00
IUUC-Mga-059839 Meleagris gallopavo 64.32 5.00e-84 306.00
IUUC-Mdo-062868 Monodelphis domestica 66.27 2.00e-134 473.00
IUUC-Mmu-064305 Mus musculus 65.51 4.00e-136 477.00
IUUC-Mac-065041 Musa acuminata 37.58 1.00e-58 219.00
IUUC-Mpu-066779 Mustela putorius furo 64.59 3.00e-134 471.00
IUUC-Mlu-067223 Myotis lucifugus 67.06 5.00e-134 472.00
IUUC-Ncr-068919 Neurospora crassa 25.00 5.00e-08 52.40
IUUC-Nle-069852 Nomascus leucogenys 65.41 3.00e-135 474.00
IUUC-Ont-072452 Oreochromis niloticus 73.53 2.00e-151 529.00
IUUC-Oan-073163 Ornithorhynchus anatinus 65.52 6.00e-46 176.00
IUUC-Ocu-074628 Oryctolagus cuniculus 64.59 9.00e-136 476.00
IUUC-Oba-075868 Oryza barthii 38.73 3.00e-58 219.00
IUUC-Obr-076768 Oryza brachyantha 38.73 1.00e-59 223.00
IUUC-Ogl-077424 Oryza glaberrima 39.08 2.00e-60 226.00
IUUC-Ogu-078847 Oryza glumaepatula 39.08 9.00e-59 220.00
IUUC-Oin-079495 Oryza indica 39.08 2.00e-60 226.00
IUUC-Olo-080268 Oryza longistaminata 39.08 1.00e-58 220.00
IUUC-Ome-081709 Oryza meridionalis 39.15 1.00e-51 196.00
IUUC-Oni-082749 Oryza nivara 39.08 2.00e-60 226.00
IUUC-Opu-084023 Oryza punctata 33.10 1.00e-41 163.00
IUUC-Oru-084764 Oryza rufipogon 39.08 9.00e-59 220.00
IUUC-Osa-086009 Oryza sativa 39.08 2.00e-60 226.00
IUUC-Ola-086463 Oryzias latipes 70.38 2.00e-142 498.00
IUUC-Olu-087897 Ostreococcus lucimarinus 33.56 9.00e-46 177.00
IUUC-Oga-089114 Otolemur garnettii 63.61 1.00e-135 476.00
IUUC-Ptr-090556 Pan troglodytes 63.33 2.00e-135 475.00
IUUC-Pan-092828 Papio anubis 64.39 2.00e-135 475.00
IUUC-Psi-093609 Pelodiscus sinensis 66.06 5.00e-118 419.00
IUUC-Pma-094413 Petromyzon marinus 56.05 2.00e-102 366.00
IUUC-Ppa-095422 Physcomitrella patens 36.62 3.00e-59 222.00
IUUC-Pfo-096389 Poecilia formosa 71.76 6.00e-148 517.00
IUUC-Pab-098095 Pongo abelii 63.61 3.00e-136 478.00
IUUC-Pop-099612 Populus trichocarpa 35.88 7.00e-54 204.00
IUUC-Pca-100408 Procavia capensis 64.35 4.00e-134 471.00
IUUC-Ppe-101931 Prunus persica 37.63 5.00e-53 201.00
IUUC-Pva-102549 Pteropus vampyrus 67.95 1.00e-136 479.00
IUUC-Rno-105079 Rattus norvegicus 63.43 1.00e-137 483.00
IUUC-Sha-107299 Sarcophilus harrisii 65.22 2.00e-125 443.00
IUUC-Sja-107829 Schizosaccharomyces japonicus 29.12 2.00e-22 100.00
IUUC-Spo-108122 Schizosaccharomyces pombe 29.19 8.00e-27 114.00
IUUC-Smo-109673 Selaginella moellendorffii 36.49 4.00e-51 195.00
IUUC-Sit-110263 Setaria italica 38.30 2.00e-57 216.00
IUUC-Sly-110988 Solanum lycopersicum 35.57 3.00e-51 196.00
IUUC-Stu-112713 Solanum tuberosum 35.93 7.00e-52 197.00
IUUC-Sbi-114617 Sorghum bicolor 37.94 3.00e-56 212.00
IUUC-Sre-115136 Sporisorium reilianum 32.95 2.00e-14 73.90
IUUC-Ssc-116268 Sus scrofa 63.23 4.00e-135 475.00
IUUC-Tgu-116720 Taeniopygia guttata 59.29 1.00e-88 321.00
IUUC-Tru-117977 Takifugu rubripes 72.27 1.00e-141 496.00
IUUC-Tsy-119121 Tarsius syrichta 65.50 2.00e-72 265.00
IUUC-Tni-119904 Tetraodon nigroviridis 67.16 1.00e-136 479.00
IUUC-Tca-121718 Theobroma cacao 38.57 4.00e-58 218.00
IUUC-Tae-124364 Triticum aestivum 37.89 6.00e-56 211.00
IUUC-Tme-126922 Tuber melanosporum 23.62 7.00e-13 68.90
IUUC-Tbe-127276 Tupaia belangeri 67.79 1.00e-116 412.00
IUUC-Uma-129505 Ustilago maydis 30.08 1.00e-11 65.10
IUUC-Vpa-130276 Vicugna pacos 70.22 3.00e-98 351.00
IUUC-Vvi-131377 Vitis vinifera 36.95 7.00e-56 213.00
IUUC-Xtr-132529 Xenopus tropicalis 70.55 1.00e-147 517.00
IUUC-Xma-134177 Xiphophorus maculatus 71.47 2.00e-140 492.00
IUUC-Yli-134665 Yarrowia lipolytica 23.51 2.00e-07 49.70
Created Date 25-Jun-2017

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