iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132215

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 38

Genbank Nucleotide ID

AAMC01117205

Gene Name

wdr38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000016844.3	ENSXETT00000036715.3	ENSXETP00000036715.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-44	147.1	187	221
UBD/Beta-Prp	2.80e-71	240.3	16	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           gH++ v+c++f  s ++l+sGs+D+t+ vW++r g 
   Q: 187  GHKSNVSCVCFsiS-GMLASGSWDKTVCVWNPRNGS 221
           8**********877.9***************99886 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           +++ hk+ +++ + spd  ll+t s+d++i +w++++g+l +++ gh+++v++++fspdg +++++s D t+++w ++t +c+h+l+ h
   Q: 16   YFERHKGEVNSCALSPDCHLLLTCSDDSRIHLWEAKSGTLKQKVTGHTGPVKSCCFSPDGLLFASSSHDCTVRIWKVDTVECLHVLRDH 104
           67889999999999*************************************************************************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           ++sv ++ fsp++ +l+sG++d t+ +w++++gq+ + +  gh+++++c +++ +g+++++Gs D tvr+W  
   Q: 105  SKSVETVCFSPDSRYLLSGGWDCTAILWEVQNGQKRK-VYHGHRDAIQCGAFSLNGSYIATGSWDYTVRVWIA 176
           ************************************9.*********************************44 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MWKNPSEYFA TATVKYFERH KGEVNSCALS PDCHLLLTCS DDSRIHLWEA KSGTLKQKVT 60
GHTGPVKSCC FSPDGLLFAS SSHDCTVRIW KVDTVECLHV LRDHSKSVET VCFSPDSRYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAAAA ATCCATCAGA ATATTTTGCC ACAGCAACCG TGAAGTATTT TGAGAGACAC 60
AAAGGAGAGG TTAGTGCGAT TCTCTGAAGC TCTGATTTAT ACTTCCGCTT ATTTTCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	52.61	4.00e-85	307.00
IUUC-Ang-009841	Aspergillus niger	37.93	1.00e-45	178.00
IUUC-Ame-010858	Astyanax mexicanus	53.05	8.00e-84	303.00
IUUC-Bta-012352	Bos taurus	51.01	1.00e-84	305.00
IUUC-Cja-019585	Callithrix jacchus	49.83	4.00e-83	301.00
IUUC-Cfa-020062	Canis familiaris	49.07	2.00e-70	258.00
IUUC-Csa-023528	Chlorocebus sabaeus	52.96	2.00e-87	315.00
IUUC-Cin-025426	Ciona intestinalis	39.62	6.00e-59	220.00
IUUC-Cgl-026771	Colletotrichum gloeosporioides	38.00	3.00e-49	190.00
IUUC-Dre-027740	Danio rerio	52.68	1.00e-57	215.00
IUUC-Dno-030012	Dasypus novemcinctus	44.55	2.00e-79	288.00
IUUC-Dor-030536	Dipodomys ordii	44.33	2.00e-68	252.00
IUUC-Ete-032871	Echinops telfairi	53.30	8.00e-70	256.00
IUUC-Eca-033729	Equus caballus	53.15	2.00e-88	318.00
IUUC-Eeu-034740	Erinaceus europaeus	51.40	4.00e-84	304.00
IUUC-Fca-036514	Felis catus	50.70	2.00e-85	308.00
IUUC-Ggo-044793	Gorilla gorilla	51.57	9.00e-84	303.00
IUUC-Hsa-046414	Homo sapiens	52.26	2.00e-85	308.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	51.03	1.00e-75	276.00
IUUC-Lch-049905	Latimeria chalumnae	61.51	9.00e-114	402.00
IUUC-Loc-052101	Lepisosteus oculatus	64.14	3.00e-112	397.00
IUUC-Laf-053443	Loxodonta africana	52.07	9.00e-81	293.00
IUUC-Mcc-055346	Macaca mulatta	53.31	5.00e-88	317.00
IUUC-Meu-056531	Macropus eugenii	57.52	2.00e-72	265.00
IUUC-Mor-057042	Magnaporthe oryzae	32.40	1.00e-32	134.00
IUUC-Mmr-061721	Microcebus murinus	53.12	2.00e-87	315.00
IUUC-Mdo-062379	Monodelphis domestica	54.55	9.00e-92	330.00
IUUC-Mmu-064175	Mus musculus	52.10	4.00e-85	307.00
IUUC-Mpu-066361	Mustela putorius furo	52.45	6.00e-87	313.00
IUUC-Mlu-067300	Myotis lucifugus	41.28	2.00e-51	195.00
IUUC-Nle-070150	Nomascus leucogenys	52.78	6.00e-85	306.00
IUUC-Opr-071060	Ochotona princeps	45.99	4.00e-62	231.00
IUUC-Ocu-074101	Oryctolagus cuniculus	51.53	7.00e-87	313.00
IUUC-Oga-088479	Otolemur garnettii	50.70	1.00e-81	295.00
IUUC-Oar-089608	Ovis aries	51.53	4.00e-85	308.00
IUUC-Ptr-091521	Pan troglodytes	53.31	2.00e-87	315.00
IUUC-Pan-092092	Papio anubis	52.96	6.00e-88	317.00
IUUC-Pab-098454	Pongo abelii	52.61	2.00e-86	311.00
IUUC-Pca-100981	Procavia capensis	52.80	7.00e-87	313.00
IUUC-Pva-102491	Pteropus vampyrus	52.10	5.00e-87	314.00
IUUC-Rno-105417	Rattus norvegicus	50.92	3.00e-77	281.00
IUUC-Sha-107649	Sarcophilus harrisii	54.74	9.00e-94	336.00
IUUC-Sar-113110	Sorex araneus	43.86	3.00e-50	191.00
IUUC-Ssc-116197	Sus scrofa	54.55	3.00e-88	318.00
IUUC-Tbe-127734	Tupaia belangeri	49.09	7.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence