iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000017746.1	ENSORLT00000022210.1	ENSORLP00000022209.1
ENSORLG00000017746.1	ENSORLT00000022212.1	ENSORLP00000022211.1
ENSORLG00000017746.1	ENSORLT00000022213.1	ENSORLP00000022212.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.10e-07	29.5	11	65
E3 activity/RING/RING	1.20e-06	29.2	15	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteed 54
           ++f+C++ l++ + Pv++p+G++y  ++I+ + +++       cP +rq++ ++ 
   Q: 11   DHFNCSVCLDVLKSPVTIPCGHSYCHNCIQNYWDQDDYlgvfACPQCRQTFNPRP 65
           78******************************9888888999*******997654 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ +k  p++ pCgH ++++C+q++   ++   + f CP Cr
   Q: 15   CSVCLDVLKS-PVTIPCGHSYCHNCIQNY-WDQDDYLGVFACPQCR 58
           ********99.9**************888.34445678899****8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAQAGVILDL DHFNCSVCLD VLKSPVTIPC GHSYCHNCIQ NYWDQDDYLG VFACPQCRQT 60
FNPRPALARS TMLADVVEKF KETRVRETSP PAAERGLAGA DDVECDVCAV RKNRAVKSCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTGCTCTT CTTCAAAGAT GGCTCAGGCG GGGGTTATTC TGGACCTGGA CCACTTTAAC 60
TGCTCCGTGT GTCTGGACGT GCTGAAGAGT CCGGTCACGA TCCCGTGCGG ACACAGCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-027598	Danio rerio	46.89	3.00e-140	491.00
IUUC-Gmo-039186	Gadus morhua	51.41	2.00e-148	518.00
IUUC-Gac-042532	Gasterosteus aculeatus	54.70	2.00e-175	608.00
IUUC-Ont-072523	Oreochromis niloticus	54.90	0.00e+00	652.00
IUUC-Pfo-096490	Poecilia formosa	57.65	0.00e+00	657.00
IUUC-Sre-115123	Sporisorium reilianum	38.71	2.00e-07	50.10
IUUC-Tru-118493	Takifugu rubripes	64.90	0.00e+00	756.00
IUUC-Tni-120557	Tetraodon nigroviridis	58.01	4.00e-175	607.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence