iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000016441.1	ENSONIT00000020724.1	ENSONIP00000020706.1
ENSONIG00000016441.1	ENSONIT00000020725.1	ENSONIP00000020707.1
ENSONIG00000016441.1	ENSONIT00000020726.1	ENSONIP00000020708.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-40	135.1	635	667
UBD/Beta-Prp	1.70e-59	201.9	532	719

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt+++t++a+   ++  lv+ s+Dgt +vWD+
   Q: 635  GHTAKITGMAWsphHNAQLVTVSYDGTAQVWDV 667
           8**********9643356**************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.......ilvtgseDrtikvwdls....... 82
           h+ s+ t++ ++pd++++a g +dg+i v+++ + kll s+++h + ++++++++d +       +l++gs+ ++++v dl+       
   Q: 532  HKLSPHTDLSWKPDGKVVAIGNEDGCIDVYQAPSLKLLCSIQQHHKIINTLRWHHDHSsapelhcLLASGSSNAIVYVHDLRsvienpp 620
           67788999999*********************************************999999**9**************9999999998 PP
   S: 83   .....tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlW 164
                  ++ + l gh+++++ +++sp  +  lv+ s d t++vwd+ ++  ++   +gh g   cv ++p + +++ +G++D t++ W
   Q: 621  espvvLTEPYRRLCGHTAKITGMAWSPhHNAQLVTVSYDGTAQVWDVLEEAAVS-NYRGHVGYLLCVDWSPVDpDVIWTGGKDFTLQEW 708
           888887788888889************6669**********************9.9********************************* PP
   S: 165  dl........k 167
           ++        +
   Q: 709  NVskqqftkpP 719
           99544444441 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

VVMRERSLPA SPNWYCSRCS DVSSSGLLGV GAKNIIYLID VSASSCRVAA SPDPFIFSGE 60
LVGHKDLVSG FSFCQHAGQS HICVSSSSDG SIRFWDSSSK TLIRDHAAHQ SSVSALHWSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGTCATGC GGGAACGGTC GCTTCCCGCC TCTCCCAACT GGTACTGCTC GCGCTGCAGT 60
GATGTCAGCA GCAGCGGTTT GCTGGGCGTC GGGGCCAAAA ACATCATCTA CTTGATAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001199	Ailuropoda melanoleuca	62.60	0.00e+00	1031.00
IUUC-Apl-003586	Anas platyrhynchos	64.73	0.00e+00	810.00
IUUC-Aca-004956	Anolis carolinensis	61.01	0.00e+00	995.00
IUUC-Ame-010753	Astyanax mexicanus	72.73	0.00e+00	1128.00
IUUC-Bta-012315	Bos taurus	61.89	0.00e+00	1017.00
IUUC-Cja-019334	Callithrix jacchus	61.75	0.00e+00	1014.00
IUUC-Cfa-021254	Canis familiaris	61.78	0.00e+00	1028.00
IUUC-Cpo-021984	Cavia porcellus	48.36	0.00e+00	1347.00
IUUC-Csa-023650	Chlorocebus sabaeus	61.95	0.00e+00	1019.00
IUUC-Cho-024860	Choloepus hoffmanni	60.99	0.00e+00	991.00
IUUC-Cin-025778	Ciona intestinalis	39.95	2.00e-153	537.00
IUUC-Csv-026313	Ciona savignyi	39.44	1.00e-157	550.00
IUUC-Dre-028096	Danio rerio	70.33	0.00e+00	1093.00
IUUC-Dno-029799	Dasypus novemcinctus	61.23	0.00e+00	1005.00
IUUC-Dor-030885	Dipodomys ordii	50.21	0.00e+00	733.00
IUUC-Ete-032918	Echinops telfairi	57.50	0.00e+00	929.00
IUUC-Eca-034144	Equus caballus	61.44	0.00e+00	995.00
IUUC-Eeu-034843	Erinaceus europaeus	64.87	0.00e+00	634.00
IUUC-Fca-035948	Felis catus	60.87	0.00e+00	1008.00
IUUC-Fal-037303	Ficedula albicollis	49.97	0.00e+00	1407.00
IUUC-Gmo-039591	Gadus morhua	61.67	0.00e+00	993.00
IUUC-Gga-040570	Gallus gallus	48.41	0.00e+00	1216.00
IUUC-Gac-042646	Gasterosteus aculeatus	74.59	0.00e+00	2051.00
IUUC-Ggo-045605	Gorilla gorilla	50.35	0.00e+00	765.00
IUUC-Hsa-046122	Homo sapiens	61.85	0.00e+00	1019.00
IUUC-Itr-048094	Ictidomys tridecemlineatus	61.81	0.00e+00	1013.00
IUUC-Lch-050489	Latimeria chalumnae	41.19	0.00e+00	738.00
IUUC-Loc-052259	Lepisosteus oculatus	65.25	0.00e+00	1027.00
IUUC-Laf-053338	Loxodonta africana	61.68	0.00e+00	1019.00
IUUC-Mcc-055442	Macaca mulatta	61.81	0.00e+00	1018.00
IUUC-Meu-056245	Macropus eugenii	62.60	0.00e+00	677.00
IUUC-Mga-060202	Meleagris gallopavo	49.09	0.00e+00	1292.00
IUUC-Mmr-061730	Microcebus murinus	61.58	0.00e+00	1016.00
IUUC-Mdo-062880	Monodelphis domestica	62.04	0.00e+00	1020.00
IUUC-Mmu-063930	Mus musculus	61.68	0.00e+00	1010.00
IUUC-Mpu-066605	Mustela putorius furo	61.80	0.00e+00	1019.00
IUUC-Mlu-067765	Myotis lucifugus	62.05	0.00e+00	1018.00
IUUC-Nle-069183	Nomascus leucogenys	61.68	0.00e+00	1018.00
IUUC-Opr-070659	Ochotona princeps	36.13	5.00e-90	327.00
IUUC-Oan-073056	Ornithorhynchus anatinus	64.75	0.00e+00	978.00
IUUC-Ocu-073881	Oryctolagus cuniculus	39.12	5.00e-127	449.00
IUUC-Ola-087120	Oryzias latipes	78.04	2.00e-95	341.00
IUUC-Olu-087648	Ostreococcus lucimarinus	26.26	2.00e-31	132.00
IUUC-Oga-088343	Otolemur garnettii	48.76	0.00e+00	1404.00
IUUC-Oar-089257	Ovis aries	61.95	0.00e+00	1024.00
IUUC-Ptr-090497	Pan troglodytes	61.98	0.00e+00	1018.00
IUUC-Pan-092638	Papio anubis	61.64	0.00e+00	1015.00
IUUC-Psi-093096	Pelodiscus sinensis	49.69	0.00e+00	1218.00
IUUC-Pma-094571	Petromyzon marinus	45.04	4.00e-53	202.00
IUUC-Pfo-096348	Poecilia formosa	71.48	0.00e+00	1998.00
IUUC-Pab-098153	Pongo abelii	61.95	0.00e+00	1026.00
IUUC-Pca-100957	Procavia capensis	57.79	0.00e+00	951.00
IUUC-Pva-102439	Pteropus vampyrus	48.63	0.00e+00	1413.00
IUUC-Rno-105891	Rattus norvegicus	49.21	0.00e+00	1350.00
IUUC-Sha-107181	Sarcophilus harrisii	64.09	0.00e+00	983.00
IUUC-Ssc-115413	Sus scrofa	62.64	0.00e+00	1043.00
IUUC-Tgu-117082	Taeniopygia guttata	50.10	0.00e+00	1383.00
IUUC-Tru-118491	Takifugu rubripes	79.97	0.00e+00	1264.00
IUUC-Tsy-119629	Tarsius syrichta	65.29	8.00e-120	425.00
IUUC-Tni-120240	Tetraodon nigroviridis	80.49	0.00e+00	1226.00
IUUC-Tbe-127673	Tupaia belangeri	43.15	0.00e+00	1110.00
IUUC-Ttr-128562	Tursiops truncatus	61.23	0.00e+00	998.00
IUUC-Vpa-130596	Vicugna pacos	58.90	0.00e+00	950.00
IUUC-Xtr-132469	Xenopus tropicalis	49.19	0.00e+00	1352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence