iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000019604.3	ENSXETT00000061345.1	ENSXETP00000058413.1
ENSXETG00000019604.3	ENSXETT00000042401.2	ENSXETP00000042401.2
ENSXETG00000019604.3	ENSXETT00000064980.1	ENSXETP00000059297.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-31	107.0	220	255
UBD/Beta-Prp	7.00e-42	143.8	143	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++++++++f ++ + +++GsdD t++++Dlr + 
   Q: 220  GHESDINAICFfPNgNAFATGSDDATCRLFDLRADQ 255
           8*********99777*****************9875 PP

UBD/Beta-Prp

   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           +c ++ + +n ++++s D+t+ lWd++tg+  +t+tg ht++v sls+ ++++++vsg++d + klwd+++g c +t++gh++ ++ + 
   Q: 143  SCCRFLD-DNQIITSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDSRCFVSGACDASAKLWDIREGMCRQTFTGHESDINAIC 229
           5555555.588999**********************9.*************************************************** PP
   S: 230  fspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           f+pn++ +++gs+D + r++dlr ++ l ++++ 
   Q: 230  FFPNGNAFATGSDDATCRLFDLRADQELMVYSHD 263
           *************************998888774 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSELDQLRQE AEQLKNQIRD ARKACADATL AQITANIDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIRLYHSTQ MSCSPCTERQ IQLQNVCIIY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGAAC TAGATCAGCT ACGCCAGGAG GCTGAGCAGC TCAAGAACCA AATCAGAGTA 60
TGTATTTAAG ATGCAGCTTT GTATTGCGCA CTCTTAAGGG TATTGTCCCA TTGGTGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048920--P:posterior lateral line neuromast primordium migration
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gga-041163	Gallus gallus	84.80	6.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence