iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000019764.3	ENSXETT00000025146.3	ENSXETP00000025146.3
ENSXETG00000019764.3	ENSXETT00000042786.2	ENSXETP00000042786.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-06	25.8	10	85
E3 activity/RING/RING	3.30e-07	30.9	15	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqpl.teedlvPnltlrrliqawceens 73
            ee++C++ l++ +dPv+l +G+ + r++I   l ++ +    tcP +r ++ +  dl  n  l ++++++++++s
   Q: 10   REELNCSVCLNVYTDPVMLICGHNFCRTCILSVLGTQTEsafyTCPECRVEFlEWPDLHRNRKLCNIVEQFLSAHS 85
           5899****************************99766667899******998688899999999999999999986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ + d p+ l CgH f+++C+  + +  + +s + +CP Cr
   Q: 15   CSVCLNVYTD-PVMLICGHNFCRTCILSV-LGTQTESAFYTCPECR 58
           **********.888************999.99999**********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

LAEMACCDLR EELNCSVCLN VYTDPVMLIC GHNFCRTCIL SVLGTQTESA FYTCPECRVE 60
FLEWPDLHRN RKLCNIVEQF LSAHSELSES AIVCTYCIHS PVPALKSCLM CEASLCDTHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAGAGAG ACACGGGTCT TGCTGCTCTC TGTTTGTGAA TCTTGCAGAT TTGTAAGTGG 60
GGAAGACTTT GTGATGGTTT TTGTAGGGGT TTGGGATATA TGTCCTTAAT CCATGGTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR013320--ConA-like_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence