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Tag Content
UUCD2 ID IUUC-Pop-098812
UUCD1 version UUC-PoT-00805
Ensembl Protein ID POPTR_0002s17400.1
UniProt Accession B9GR30; B9GR30_POPTR
Genbank Protein ID EEE81913.2
Protein Name Transducin family protein
Genbank Nucleotide ID CM000338
Gene Name POPTRDRAFT_816638; POPTR_0002s17400g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s17400 POPTR_0002s17400.1 POPTR_0002s17400.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.60e-12 46.3 2338 2373
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H +svt ++  +   l+++Gs Dg ik+WD +  +l
   Q: 2338 HLGSVTKISTiPHtSLFLTGSKDGDIKLWDAKAAKL 2373
           9999***996655589**************766665 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MPETSTASPT RASINPTDHL PLSLFRSDII PPAPTRSAST IDWLPDFSGY SWVAYGASSL 60
LVISHLPSPL SPEEAAIGPI LQQVFELSSD DSSPVKSVSW SPVTPSIGEL AAASDNCISV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-098812|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCTGTCTCT CACTAACTCT CTCCTCGCAT CACAGGCGAA ACCAAAATGC CCGAAACAAG 60
CACTGCCTCT CCTACTCGAG CCTCAATTAA CCCCACCGAC CACCTCCCTC TCTCTCTCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098812|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12234--Rav1p_C
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly
KEGG pop:POPTR_0002s17400g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000362 Aegilops tauschii 58.05 2.00e-52 197.00
IUUC-Aml-001368 Ailuropoda melanoleuca 31.80 2.00e-34 142.00
IUUC-Atr-002754 Amborella trichopoda 56.43 0.00e+00 643.00
IUUC-Apl-003377 Anas platyrhynchos 32.19 9.00e-34 140.00
IUUC-Aca-004649 Anolis carolinensis 31.23 2.00e-36 149.00
IUUC-Aly-006404 Arabidopsis lyrata 52.34 0.00e+00 1377.00
IUUC-Ath-006612 Arabidopsis thaliana 48.99 0.00e+00 2095.00
IUUC-Afu-009077 Aspergillus fumigatus 27.19 1.00e-34 142.00
IUUC-Ani-009437 Aspergillus nidulans 25.18 8.00e-37 149.00
IUUC-Ang-009742 Aspergillus niger 28.61 7.00e-37 149.00
IUUC-Ame-010919 Astyanax mexicanus 27.40 8.00e-36 147.00
IUUC-Bta-013088 Bos taurus 31.69 2.00e-34 142.00
IUUC-Bdi-014471 Brachypodium distachyon 45.13 2.00e-171 595.00
IUUC-Bol-016375 Brassica oleracea 49.03 0.00e+00 2081.00
IUUC-Bra-016630 Brassica rapa 49.11 0.00e+00 2135.00
IUUC-Cel-018537 Caenorhabditis elegans 37.65 1.00e-24 110.00
IUUC-Cja-019137 Callithrix jacchus 36.45 2.00e-33 139.00
IUUC-Cfa-021215 Canis familiaris 30.63 5.00e-34 140.00
IUUC-Cpo-022333 Cavia porcellus 31.93 2.00e-34 142.00
IUUC-Csa-023151 Chlorocebus sabaeus 31.69 3.00e-33 138.00
IUUC-Cho-024762 Choloepus hoffmanni 30.17 4.00e-33 138.00
IUUC-Csv-026055 Ciona savignyi 39.13 1.00e-38 156.00
IUUC-Dre-028673 Danio rerio 33.05 2.00e-34 142.00
IUUC-Dno-029855 Dasypus novemcinctus 31.80 9.00e-27 117.00
IUUC-Dor-030381 Dipodomys ordii 35.61 3.00e-33 138.00
IUUC-Dme-031825 Drosophila melanogaster 35.14 4.00e-40 161.00
IUUC-Ete-033176 Echinops telfairi 33.05 1.00e-32 136.00
IUUC-Eca-033386 Equus caballus 30.17 3.00e-33 138.00
IUUC-Eeu-035011 Erinaceus europaeus 32.92 2.00e-33 139.00
IUUC-Fca-035735 Felis catus 32.98 3.00e-35 145.00
IUUC-Fal-037367 Ficedula albicollis 31.65 2.00e-35 145.00
IUUC-Gmo-038687 Gadus morhua 26.53 2.00e-34 142.00
IUUC-Gga-040693 Gallus gallus 31.76 2.00e-34 142.00
IUUC-Gac-041986 Gasterosteus aculeatus 30.25 5.00e-34 141.00
IUUC-Gma-044099 Glycine max 54.23 0.00e+00 1555.00
IUUC-Ggo-044811 Gorilla gorilla 36.10 2.00e-33 139.00
IUUC-Hsa-045950 Homo sapiens 36.10 2.00e-33 139.00
IUUC-Hvu-047213 Hordeum vulgare 67.79 6.00e-121 426.00
IUUC-Itr-047982 Ictidomys tridecemlineatus 29.83 3.00e-33 138.00
IUUC-Lch-050020 Latimeria chalumnae 33.10 2.00e-34 142.00
IUUC-Lpe-051382 Leersia perrieri 39.67 0.00e+00 1296.00
IUUC-Loc-052909 Lepisosteus oculatus 31.42 9.00e-36 147.00
IUUC-Laf-054195 Loxodonta africana 36.59 3.00e-34 142.00
IUUC-Mcc-055646 Macaca mulatta 36.10 2.00e-33 139.00
IUUC-Meu-056627 Macropus eugenii 27.15 2.00e-21 99.40
IUUC-Mtr-058725 Medicago truncatula 53.17 0.00e+00 2503.00
IUUC-Mga-059386 Meleagris gallopavo 32.77 2.00e-33 139.00
IUUC-Mmr-060784 Microcebus murinus 36.59 5.00e-34 141.00
IUUC-Mdo-062914 Monodelphis domestica 32.28 3.00e-34 141.00
IUUC-Mmu-063808 Mus musculus 30.35 3.00e-35 145.00
IUUC-Mac-065224 Musa acuminata 45.88 0.00e+00 1918.00
IUUC-Mpu-066054 Mustela putorius furo 29.83 4.00e-33 138.00
IUUC-Mlu-067458 Myotis lucifugus 37.38 1.00e-33 139.00
IUUC-Nfi-068420 Neosartorya fischeri 27.04 1.00e-33 139.00
IUUC-Nle-070123 Nomascus leucogenys 36.10 2.00e-33 139.00
IUUC-Opr-070543 Ochotona princeps 24.44 3.00e-17 85.50
IUUC-Ont-071658 Oreochromis niloticus 30.90 4.00e-36 148.00
IUUC-Ocu-074048 Oryctolagus cuniculus 29.56 1.00e-34 142.00
IUUC-Oba-075826 Oryza barthii 39.49 0.00e+00 1578.00
IUUC-Obr-076145 Oryza brachyantha 39.45 0.00e+00 1551.00
IUUC-Ogu-078307 Oryza glumaepatula 39.73 0.00e+00 1598.00
IUUC-Oin-080118 Oryza indica 39.51 0.00e+00 969.00
IUUC-Olo-080848 Oryza longistaminata 42.80 5.00e-175 608.00
IUUC-Oni-082792 Oryza nivara 41.06 0.00e+00 1239.00
IUUC-Opu-084153 Oryza punctata 39.85 0.00e+00 1277.00
IUUC-Oru-084415 Oryza rufipogon 40.65 0.00e+00 1211.00
IUUC-Osa-085332 Oryza sativa 51.52 4.00e-174 604.00
IUUC-Ola-087560 Oryzias latipes 32.88 1.00e-32 136.00
IUUC-Oga-088816 Otolemur garnettii 32.04 3.00e-35 145.00
IUUC-Oar-089618 Ovis aries 30.63 2.00e-34 142.00
IUUC-Ptr-090937 Pan troglodytes 36.10 2.00e-33 139.00
IUUC-Pan-092151 Papio anubis 32.04 1.00e-33 140.00
IUUC-Psi-093590 Pelodiscus sinensis 31.76 7.00e-36 147.00
IUUC-Ppa-095505 Physcomitrella patens 28.20 1.00e-178 621.00
IUUC-Pfo-097445 Poecilia formosa 29.54 2.00e-36 149.00
IUUC-Pab-098237 Pongo abelii 36.10 2.00e-33 139.00
IUUC-Pca-101008 Procavia capensis 36.95 1.00e-33 140.00
IUUC-Ppe-101610 Prunus persica 60.58 0.00e+00 1773.00
IUUC-Pva-102348 Pteropus vampyrus 36.10 2.00e-33 139.00
IUUC-Rno-105076 Rattus norvegicus 30.50 1.00e-35 146.00
IUUC-Sha-106860 Sarcophilus harrisii 32.63 4.00e-35 144.00
IUUC-Sja-107657 Schizosaccharomyces japonicus 22.70 2.00e-25 111.00
IUUC-Smo-109573 Selaginella moellendorffii 47.28 1.00e-119 422.00
IUUC-Sit-109981 Setaria italica 41.96 0.00e+00 815.00
IUUC-Sly-110968 Solanum lycopersicum 50.61 0.00e+00 1421.00
IUUC-Stu-111939 Solanum tuberosum 74.58 3.00e-77 280.00
IUUC-Sar-113751 Sorex araneus 30.73 3.00e-21 99.00
IUUC-Sbi-113768 Sorghum bicolor 64.41 4.00e-66 243.00
IUUC-Ssc-116371 Sus scrofa 29.70 1.00e-34 143.00
IUUC-Tgu-117108 Taeniopygia guttata 30.70 1.00e-33 139.00
IUUC-Tru-117628 Takifugu rubripes 30.93 4.00e-34 141.00
IUUC-Tsy-119228 Tarsius syrichta 31.66 3.00e-33 138.00
IUUC-Tni-120709 Tetraodon nigroviridis 31.76 4.00e-36 148.00
IUUC-Tca-121789 Theobroma cacao 62.13 0.00e+00 1792.00
IUUC-Tae-125726 Triticum aestivum 39.48 0.00e+00 1527.00
IUUC-Tur-126437 Triticum urartu 43.28 8.00e-65 241.00
IUUC-Tbe-127760 Tupaia belangeri 29.83 8.00e-34 140.00
IUUC-Ttr-128991 Tursiops truncatus 31.21 2.00e-34 142.00
IUUC-Vpa-130309 Vicugna pacos 30.99 6.00e-34 140.00
IUUC-Vvi-131584 Vitis vinifera 58.32 0.00e+00 1033.00
IUUC-Xtr-132638 Xenopus tropicalis 33.19 5.00e-34 141.00
IUUC-Xma-134109 Xiphophorus maculatus 30.34 8.00e-35 144.00
Created Date 25-Jun-2017

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