iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098285

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01339491

Gene Name

FBXW4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000002586.2	ENSPPYT00000003110.2	ENSPPYP00000003006.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-16	59.5	381	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           H+ +v+c++  ++++vsGs+D t kvW l +g+l
   Q: 381  HEQEVNCVDCKGGIIVSGSRDRTAKVWPLASGRL 414
           99*******9449***************999875 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MVSPPPGAAA VAARAGLRVG PAPRPLMGSQ GRSGPPGNGG PGEGEGGEAR KLQEGRVARG 60
KRRKGKGKGK ARAGQGGRGS GAEGKPGPQT AKEAAGPGAD AGARACPREE AEGGGSAEEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCATGTGA ATCGAATGGG TGCTATGAAG AATGGATGCT GAGTCCTTGG AGAATCAACT 60
TGCACTTGGG TGGTGACTGA TAAGCCCTAG CTGTGCCATT TCCTGATACA TGACTGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0051216--P:cartilage development
GO:0042733--P:embryonic digit morphogenesis
GO:0002053--P:positive regulation of mesenchymal cell proliferation

KEGG

pon:100459425

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002129	Ailuropoda melanoleuca	97.86	0.00e+00	765.00
IUUC-Apl-003837	Anas platyrhynchos	72.05	3.00e-142	497.00
IUUC-Aca-004776	Anolis carolinensis	67.65	8.00e-140	489.00
IUUC-Ame-010651	Astyanax mexicanus	62.73	4.00e-115	407.00
IUUC-Bta-013495	Bos taurus	96.26	0.00e+00	723.00
IUUC-Cja-018901	Callithrix jacchus	99.46	0.00e+00	739.00
IUUC-Cfa-021251	Canis familiaris	91.08	0.00e+00	774.00
IUUC-Cpo-021750	Cavia porcellus	94.77	0.00e+00	653.00
IUUC-Csa-024026	Chlorocebus sabaeus	99.19	0.00e+00	768.00
IUUC-Cho-024496	Choloepus hoffmanni	75.88	3.00e-159	554.00
IUUC-Cin-025142	Ciona intestinalis	31.50	9.00e-25	106.00
IUUC-Csv-025883	Ciona savignyi	37.12	3.00e-65	241.00
IUUC-Dre-027447	Danio rerio	59.11	2.00e-133	468.00
IUUC-Dno-029572	Dasypus novemcinctus	82.07	1.00e-173	603.00
IUUC-Dor-030982	Dipodomys ordii	88.89	0.00e+00	676.00
IUUC-Ete-032917	Echinops telfairi	95.38	0.00e+00	656.00
IUUC-Eca-033969	Equus caballus	97.70	0.00e+00	729.00
IUUC-Eeu-034850	Erinaceus europaeus	85.64	0.00e+00	652.00
IUUC-Fca-036182	Felis catus	92.51	0.00e+00	694.00
IUUC-Fal-037391	Ficedula albicollis	68.53	4.00e-148	517.00
IUUC-Gmo-038632	Gadus morhua	56.77	9.00e-128	449.00
IUUC-Gga-040783	Gallus gallus	73.05	1.00e-160	559.00
IUUC-Gac-042314	Gasterosteus aculeatus	56.33	8.00e-112	396.00
IUUC-Ggo-044739	Gorilla gorilla	99.73	0.00e+00	776.00
IUUC-Hsa-046705	Homo sapiens	99.73	0.00e+00	739.00
IUUC-Itr-048014	Ictidomys tridecemlineatus	98.62	7.00e-175	605.00
IUUC-Loc-052397	Lepisosteus oculatus	65.19	2.00e-139	488.00
IUUC-Laf-054544	Loxodonta africana	94.64	0.00e+00	661.00
IUUC-Meu-056363	Macropus eugenii	59.38	2.00e-102	365.00
IUUC-Mga-059275	Meleagris gallopavo	73.35	5.00e-144	503.00
IUUC-Mmr-060906	Microcebus murinus	99.19	0.00e+00	766.00
IUUC-Mdo-062400	Monodelphis domestica	77.81	7.00e-176	609.00
IUUC-Mmu-063556	Mus musculus	93.50	0.00e+00	724.00
IUUC-Mpu-066500	Mustela putorius furo	97.59	0.00e+00	764.00
IUUC-Mlu-068074	Myotis lucifugus	97.54	0.00e+00	667.00
IUUC-Nle-069601	Nomascus leucogenys	100.00	0.00e+00	778.00
IUUC-Opr-070904	Ochotona princeps	88.61	9.00e-149	519.00
IUUC-Ont-072679	Oreochromis niloticus	56.01	4.00e-122	431.00
IUUC-Oan-073434	Ornithorhynchus anatinus	73.36	1.00e-84	305.00
IUUC-Ocu-074649	Oryctolagus cuniculus	96.21	0.00e+00	738.00
IUUC-Ola-087336	Oryzias latipes	49.48	2.00e-104	372.00
IUUC-Oga-088590	Otolemur garnettii	95.66	0.00e+00	715.00
IUUC-Oar-090178	Ovis aries	93.60	0.00e+00	675.00
IUUC-Pan-092881	Papio anubis	99.46	0.00e+00	776.00
IUUC-Pfo-096176	Poecilia formosa	55.47	7.00e-114	403.00
IUUC-Pca-100888	Procavia capensis	91.71	0.00e+00	699.00
IUUC-Pva-102184	Pteropus vampyrus	83.20	3.00e-178	617.00
IUUC-Rno-105668	Rattus norvegicus	94.04	0.00e+00	729.00
IUUC-Sha-106629	Sarcophilus harrisii	77.64	2.00e-154	537.00
IUUC-Ssc-116183	Sus scrofa	98.40	0.00e+00	768.00
IUUC-Tgu-116630	Taeniopygia guttata	71.73	5.00e-168	583.00
IUUC-Tru-118761	Takifugu rubripes	52.37	5.00e-117	414.00
IUUC-Tni-120651	Tetraodon nigroviridis	51.98	2.00e-59	221.00
IUUC-Ttr-128582	Tursiops truncatus	95.45	0.00e+00	714.00
IUUC-Vpa-130431	Vicugna pacos	76.19	3.00e-98	351.00
IUUC-Xtr-132655	Xenopus tropicalis	66.12	4.00e-149	521.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence