iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131865

Ensembl Protein ID

ENSXETP00000046098.3

UniProt Accession

F6W454; F6W454_XENTR

Genbank Protein ID

ENSXETP00000046098

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01064105

Gene Name

cdc40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000021312.3	ENSXETT00000046098.3	ENSXETP00000046098.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-32	109.5	325	362
UBD/Beta-Prp	2.40e-46	158.4	271	441

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f++  t ++s+++D  +k+WD+ tg ++
   Q: 325  GHSKAVRDISFNNagTQFLSAAYDRYLKLWDTETGQCI 362
           8**********44479*******************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletg.qclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++ ++  cl++    sgh+++v+ ++++  g  + s+++Dr ++lWd +tg
   Q: 271  KQIHVWSGHTKGVSAVRLFPvSGHLLLSCSMDCKIKLWEVYKDrRCLRTfiGCSGHSKAVRDISFNNAGTQFLSAAYDRYLKLWDTETG 359
           78999999999999999999999999999999999999997661566657667999999999999999999999999999999999999 PP
   S: 170  kllrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           +++ ++t  + +  y+++f+++      +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W 
   Q: 360  QCISRFT--NRKVPYCVKFNPDEdkqSLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWE 441
           9999997..478889999999888878999999999999999999999999999999999999999999999999999999983 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

SSGNMAALTS LVSYGSASDS DSEADSEDCS AHLKSLPPGT GVLRVVDSAP EVAVKEDVET 60
GDHLDPYAKE VQFNPTYETM FAPEFGPKNP FKTQQMAAPR NMLSGYAEPT HINDFMFEQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCACGTCCA GTGGCAACAT GGCGGCTCTT ACATCTTTAG TGTCGTACGG CAGTGCTTCA 60
GACTCTGATA GTGAGGCAGA CAGTGAAGAT TGCAGCGCTC ATTTAAAATC TTTACCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	50.29	2.00e-143	502.00
IUUC-Aml-002243	Ailuropoda melanoleuca	87.32	0.00e+00	711.00
IUUC-Atr-002502	Amborella trichopoda	50.84	2.00e-152	531.00
IUUC-Apl-003885	Anas platyrhynchos	90.49	0.00e+00	982.00
IUUC-Aca-004854	Anolis carolinensis	66.36	0.00e+00	705.00
IUUC-Aly-006158	Arabidopsis lyrata	48.52	2.00e-152	531.00
IUUC-Ath-007474	Arabidopsis thaliana	49.38	7.00e-152	530.00
IUUC-Ago-007726	Ashbya gossypii	38.07	6.00e-72	264.00
IUUC-Acl-008220	Aspergillus clavatus	44.05	1.00e-132	466.00
IUUC-Afl-008473	Aspergillus flavus	42.93	7.00e-130	457.00
IUUC-Afu-008773	Aspergillus fumigatus	43.99	2.00e-131	462.00
IUUC-Ani-009323	Aspergillus nidulans	43.88	4.00e-118	418.00
IUUC-Ang-009851	Aspergillus niger	43.25	2.00e-132	465.00
IUUC-Aor-009950	Aspergillus oryzae	42.93	7.00e-130	457.00
IUUC-Ate-010372	Aspergillus terreus	44.73	2.00e-132	466.00
IUUC-Ame-011660	Astyanax mexicanus	84.28	0.00e+00	987.00
IUUC-Bgr-012230	Blumeria graminis	45.42	4.00e-127	447.00
IUUC-Bta-012568	Bos taurus	92.06	0.00e+00	985.00
IUUC-Bci-013646	Botrytis cinerea	45.26	4.00e-123	434.00
IUUC-Bdi-014199	Brachypodium distachyon	50.77	1.00e-144	506.00
IUUC-Bol-015695	Brassica oleracea	48.94	5.00e-159	554.00
IUUC-Bra-017923	Brassica rapa	49.13	2.00e-159	555.00
IUUC-Cel-018535	Caenorhabditis elegans	50.96	9.00e-179	619.00
IUUC-Cja-019071	Callithrix jacchus	89.78	0.00e+00	984.00
IUUC-Cfa-020559	Canis familiaris	89.45	0.00e+00	985.00
IUUC-Cpo-022356	Cavia porcellus	88.91	0.00e+00	981.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	43.35	7.00e-76	276.00
IUUC-Csa-023125	Chlorocebus sabaeus	89.45	0.00e+00	986.00
IUUC-Cho-024676	Choloepus hoffmanni	83.24	0.00e+00	886.00
IUUC-Cin-025229	Ciona intestinalis	69.82	0.00e+00	753.00
IUUC-Csv-025868	Ciona savignyi	71.88	8.00e-40	154.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	42.02	2.00e-109	389.00
IUUC-Cne-026885	Cryptococcus neoformans	51.92	9.00e-152	530.00
IUUC-Dre-027631	Danio rerio	82.90	0.00e+00	981.00
IUUC-Dno-029815	Dasypus novemcinctus	80.00	0.00e+00	899.00
IUUC-Dor-031143	Dipodomys ordii	74.73	0.00e+00	806.00
IUUC-Dse-031520	Dothistroma septosporum	43.26	1.00e-97	350.00
IUUC-Dme-032050	Drosophila melanogaster	63.40	0.00e+00	729.00
IUUC-Ete-032866	Echinops telfairi	86.73	0.00e+00	957.00
IUUC-Eca-033384	Equus caballus	89.45	0.00e+00	982.00
IUUC-Eeu-034471	Erinaceus europaeus	75.59	0.00e+00	754.00
IUUC-Fca-035727	Felis catus	89.45	0.00e+00	986.00
IUUC-Fal-036774	Ficedula albicollis	91.24	0.00e+00	995.00
IUUC-Fox-037951	Fusarium oxysporum	42.52	6.00e-125	441.00
IUUC-Fso-038287	Fusarium solani	43.94	4.00e-124	438.00
IUUC-Gmo-039670	Gadus morhua	80.66	0.00e+00	962.00
IUUC-Ggr-039764	Gaeumannomyces graminis	39.25	3.00e-115	408.00
IUUC-Gga-040293	Gallus gallus	91.54	0.00e+00	995.00
IUUC-Gac-042159	Gasterosteus aculeatus	83.05	0.00e+00	996.00
IUUC-Gma-044299	Glycine max	62.79	2.00e-134	473.00
IUUC-Ggo-044864	Gorilla gorilla	89.27	0.00e+00	983.00
IUUC-Hsa-046602	Homo sapiens	89.27	0.00e+00	983.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	93.11	0.00e+00	777.00
IUUC-Kpa-049318	Komagataella pastoris	46.02	3.00e-96	345.00
IUUC-Lch-049796	Latimeria chalumnae	75.00	0.00e+00	839.00
IUUC-Lpe-051153	Leersia perrieri	51.61	6.00e-148	517.00
IUUC-Loc-052467	Lepisosteus oculatus	87.41	0.00e+00	1005.00
IUUC-Lma-053107	Leptosphaeria maculans	48.54	6.00e-115	407.00
IUUC-Laf-053787	Loxodonta africana	89.13	0.00e+00	1011.00
IUUC-Mcc-055706	Macaca mulatta	89.45	0.00e+00	986.00
IUUC-Meu-056757	Macropus eugenii	74.82	3.00e-173	601.00
IUUC-Mor-057079	Magnaporthe oryzae	39.11	9.00e-115	407.00
IUUC-Mpo-057533	Magnaporthe poae	50.28	4.00e-112	397.00
IUUC-Mtr-057950	Medicago truncatula	45.47	6.00e-148	517.00
IUUC-Mla-058910	Melampsora laricipopulina	47.00	7.00e-149	520.00
IUUC-Mga-059366	Meleagris gallopavo	90.51	0.00e+00	993.00
IUUC-Mvi-060349	Microbotryum violaceum	58.25	1.00e-136	480.00
IUUC-Mmr-061209	Microcebus murinus	89.27	0.00e+00	1014.00
IUUC-Mdo-062118	Monodelphis domestica	88.18	0.00e+00	1011.00
IUUC-Mmu-063173	Mus musculus	89.27	0.00e+00	984.00
IUUC-Mac-065080	Musa acuminata	51.56	7.00e-152	530.00
IUUC-Mpu-066659	Mustela putorius furo	89.45	0.00e+00	986.00
IUUC-Mlu-067029	Myotis lucifugus	91.73	0.00e+00	964.00
IUUC-Nfi-068334	Neosartorya fischeri	45.35	5.00e-133	468.00
IUUC-Ncr-068675	Neurospora crassa	39.41	2.00e-102	366.00
IUUC-Nle-070113	Nomascus leucogenys	88.73	0.00e+00	981.00
IUUC-Opr-070685	Ochotona princeps	81.64	0.00e+00	929.00
IUUC-Ont-071680	Oreochromis niloticus	82.47	0.00e+00	979.00
IUUC-Oan-073573	Ornithorhynchus anatinus	91.30	0.00e+00	918.00
IUUC-Ocu-074074	Oryctolagus cuniculus	89.52	0.00e+00	1009.00
IUUC-Oba-075625	Oryza barthii	51.52	1.00e-146	513.00
IUUC-Obr-076510	Oryza brachyantha	51.04	1.00e-146	513.00
IUUC-Ogl-077275	Oryza glaberrima	51.52	1.00e-146	513.00
IUUC-Ogu-078563	Oryza glumaepatula	51.52	9.00e-147	513.00
IUUC-Oin-079898	Oryza indica	63.48	6.00e-134	470.00
IUUC-Olo-081080	Oryza longistaminata	51.90	1.00e-140	492.00
IUUC-Oni-083121	Oryza nivara	51.52	9.00e-147	513.00
IUUC-Opu-083329	Oryza punctata	51.61	1.00e-146	513.00
IUUC-Oru-084807	Oryza rufipogon	51.04	1.00e-128	453.00
IUUC-Osa-086039	Oryza sativa	51.61	2.00e-147	515.00
IUUC-Ola-087149	Oryzias latipes	85.06	0.00e+00	974.00
IUUC-Olu-087627	Ostreococcus lucimarinus	42.91	3.00e-118	418.00
IUUC-Oga-088359	Otolemur garnettii	89.45	0.00e+00	988.00
IUUC-Oar-089390	Ovis aries	92.06	0.00e+00	983.00
IUUC-Ptr-090894	Pan troglodytes	89.27	0.00e+00	983.00
IUUC-Pan-092476	Papio anubis	89.45	0.00e+00	986.00
IUUC-Psi-093527	Pelodiscus sinensis	87.60	0.00e+00	947.00
IUUC-Pno-094771	Phaeosphaeria nodorum	49.14	2.00e-114	405.00
IUUC-Ppa-095386	Physcomitrella patens	49.63	3.00e-152	531.00
IUUC-Pfo-096139	Poecilia formosa	82.47	0.00e+00	985.00
IUUC-Pab-097838	Pongo abelii	89.21	0.00e+00	868.00
IUUC-Pop-099962	Populus trichocarpa	51.32	2.00e-152	532.00
IUUC-Pca-100876	Procavia capensis	75.27	0.00e+00	837.00
IUUC-Ppe-101777	Prunus persica	49.63	6.00e-148	517.00
IUUC-Pva-102418	Pteropus vampyrus	88.73	0.00e+00	980.00
IUUC-Pgr-103456	Puccinia graminis	50.83	8.00e-160	556.00
IUUC-Ptt-103731	Puccinia triticina	46.69	1.00e-145	509.00
IUUC-Pte-104386	Pyrenophora teres	50.49	2.00e-116	412.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.85	1.00e-116	412.00
IUUC-Rno-105694	Rattus norvegicus	84.73	0.00e+00	914.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.60	8.00e-77	280.00
IUUC-Sha-106709	Sarcophilus harrisii	88.36	0.00e+00	1009.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	41.00	3.00e-123	435.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.32	2.00e-123	436.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	45.96	3.00e-116	412.00
IUUC-Smo-109326	Selaginella moellendorffii	44.86	4.00e-126	444.00
IUUC-Sit-110446	Setaria italica	50.38	9.00e-145	506.00
IUUC-Sly-111330	Solanum lycopersicum	47.90	1.00e-149	523.00
IUUC-Stu-112610	Solanum tuberosum	47.75	1.00e-149	522.00
IUUC-Sar-113065	Sorex araneus	69.31	2.00e-111	395.00
IUUC-Sbi-114005	Sorghum bicolor	50.76	6.00e-144	504.00
IUUC-Sre-114988	Sporisorium reilianum	49.91	6.00e-158	550.00
IUUC-Ssc-115760	Sus scrofa	89.64	0.00e+00	988.00
IUUC-Tgu-116493	Taeniopygia guttata	91.73	0.00e+00	1002.00
IUUC-Tru-118489	Takifugu rubripes	80.07	0.00e+00	959.00
IUUC-Tsy-119332	Tarsius syrichta	88.73	0.00e+00	1010.00
IUUC-Tni-120202	Tetraodon nigroviridis	80.07	0.00e+00	893.00
IUUC-Tca-121429	Theobroma cacao	46.59	4.00e-150	525.00
IUUC-Tre-122162	Trichoderma reesei	42.44	4.00e-122	431.00
IUUC-Tvi-122500	Trichoderma virens	44.23	1.00e-121	429.00
IUUC-Tae-125557	Triticum aestivum	50.19	4.00e-143	501.00
IUUC-Tur-126554	Triticum urartu	50.10	2.00e-141	495.00
IUUC-Tme-126919	Tuber melanosporum	45.47	1.00e-139	489.00
IUUC-Tbe-127968	Tupaia belangeri	83.82	0.00e+00	939.00
IUUC-Ttr-129215	Tursiops truncatus	89.09	0.00e+00	978.00
IUUC-Uma-129622	Ustilago maydis	49.38	2.00e-160	558.00
IUUC-Vda-129750	Verticillium dahliae	42.91	1.00e-124	439.00
IUUC-Vpa-130617	Vicugna pacos	89.02	0.00e+00	923.00
IUUC-Vvi-131238	Vitis vinifera	47.76	3.00e-150	525.00
IUUC-Xma-133627	Xiphophorus maculatus	82.99	0.00e+00	993.00
IUUC-Yli-134390	Yarrowia lipolytica	45.88	2.00e-116	412.00
IUUC-Zma-135925	Zea mays	51.52	2.00e-140	492.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence