iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111514

Ensembl Protein ID

Solyc03g026350.2.1

UniProt Accession

K4BFA8; K4BFA8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g026350.2	Solyc03g026350.2.1	Solyc03g026350.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-24	85.9	145	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  vt++a+ s+ + l sGs D++++vWD  +g +
   Q: 145  GHQKVVTGIALpSGsDKLYSGSTDKSVRVWDCQSGQC 181
           89*********966799**************999987 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEMDGSKRVF QRLGPSSQGD TSNNKQQKVC FHWRAGRCNR FPCPFLHREL PGPPQQQQHA 60
AGNGMSSSKR PHGFSDDNRG SGMRRNPNFN NTWGRTAAGG GAVVRKTEKV CNYWVKGNCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCGAAGTA TACAAATTGG GGATCTTCTC TTCCAAATTA ATTTTCTGCA ACTCCGAAAT 60
TAGGGTTTTC AATTCATCAA AACCCTAGTA ATCGATTCCA ATTCTCGTTT TACTGTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

sly:101261301

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	42.77	2.00e-70	258.00
IUUC-Atr-002831	Amborella trichopoda	55.45	9.00e-138	482.00
IUUC-Aly-005699	Arabidopsis lyrata	62.64	2.00e-161	561.00
IUUC-Ath-007223	Arabidopsis thaliana	64.60	5.00e-168	583.00
IUUC-Bdi-014857	Brachypodium distachyon	57.63	2.00e-142	497.00
IUUC-Bol-016382	Brassica oleracea	61.87	3.00e-158	550.00
IUUC-Bra-017102	Brassica rapa	63.07	1.00e-160	558.00
IUUC-Gma-042894	Glycine max	65.91	7.00e-161	559.00
IUUC-Hvu-047824	Hordeum vulgare	56.94	3.00e-110	390.00
IUUC-Lpe-051596	Leersia perrieri	50.35	5.00e-117	413.00
IUUC-Mtr-058068	Medicago truncatula	61.38	1.00e-149	521.00
IUUC-Mac-065071	Musa acuminata	64.37	2.00e-159	554.00
IUUC-Oba-075769	Oryza barthii	50.96	1.00e-119	422.00
IUUC-Obr-076011	Oryza brachyantha	57.01	4.00e-145	506.00
IUUC-Ogl-077742	Oryza glaberrima	40.63	2.00e-78	285.00
IUUC-Ogu-078248	Oryza glumaepatula	51.28	3.00e-123	434.00
IUUC-Oin-079981	Oryza indica	58.78	3.00e-148	517.00
IUUC-Olo-080571	Oryza longistaminata	51.36	2.00e-112	398.00
IUUC-Ome-081598	Oryza meridionalis	51.52	2.00e-121	428.00
IUUC-Oni-082711	Oryza nivara	51.52	1.00e-121	429.00
IUUC-Opu-083451	Oryza punctata	54.65	7.00e-143	499.00
IUUC-Oru-085129	Oryza rufipogon	51.20	3.00e-118	417.00
IUUC-Osa-085619	Oryza sativa	57.27	5.00e-106	376.00
IUUC-Ppa-096012	Physcomitrella patens	52.44	3.00e-103	368.00
IUUC-Pop-099994	Populus trichocarpa	65.21	7.00e-161	559.00
IUUC-Pca-100375	Procavia capensis	27.12	8.00e-16	78.20
IUUC-Ppe-101609	Prunus persica	69.09	1.00e-178	618.00
IUUC-Smo-108900	Selaginella moellendorffii	47.03	4.00e-95	340.00
IUUC-Sit-109731	Setaria italica	56.13	8.00e-137	479.00
IUUC-Stu-112646	Solanum tuberosum	98.37	0.00e+00	847.00
IUUC-Sbi-114748	Sorghum bicolor	56.26	6.00e-139	486.00
IUUC-Tca-121658	Theobroma cacao	63.11	1.00e-157	548.00
IUUC-Tae-125577	Triticum aestivum	55.71	1.00e-141	495.00
IUUC-Tur-126095	Triticum urartu	52.82	3.00e-80	292.00
IUUC-Vvi-131444	Vitis vinifera	68.83	0.00e+00	637.00
IUUC-Xtr-132043	Xenopus tropicalis	25.50	2.00e-20	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence