iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-085743

UUCD1 version

UUC-OrS-00223

Ensembl Protein ID

OS05T0112000-01

UniProt Accession

Q65XV2; A0A0P0WH25; Q8LLW2; XB3_ORYSJ

Genbank Protein ID

AAK58690.1; AAU44210.1; BAF16363.1; BAS91932.1; EEE62082.1; BAG98113.1

Protein Name

E3 ubiquitin-protein ligase XB3; Ankyrin repeat domain and RING finger-containing protein XB3; RING-type E3 ubiquitin transferase XB3; XA21-binding protein 3

Genbank Nucleotide ID

AF272860; AC079356; AP008211; AP014961; CM000142; AK107650

Gene Name

XB3; Os05g0112000; LOC_Os05g02130; OsJ_16866; P0016H04.16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS05G0112000	OS05T0112000-01	OS05T0112000-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	17172358

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	0.017	16.6	323	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C+iC++  ++   v +CgH+++a C  ++     p++  ++ ++  CP Cr
   Q: 323  CCICFDQACT-IEVQDCGHQMCAPCTLALcchnkPNPTTLTPPSPACPFCR 372
           ********99.999***********866677777999999**********8 PP

Organism

Oryza sativa

Functional Description
(View)

E3 ubiquitin-protein ligase required for full accumulation of the LRR receptor kinase XA21 and XA21-mediated disease resistance. Binding to XA21 may stabilize the receptor kinase and maintain its protein level. Autoubiquitinated in vitro.

Protein Sequence
(Fasta)

MGHGVSCART GDEHDFFRAA QLGDLDALAA LLAADPSLAR RATLYDRLSV LHIAAANGRI 60
EVLSMFLDRG APPDAVNRHK QTPLMLAAMH GKIDCVLKLL QADANILMFD SVHARTCLHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCTTCCT TTCCCCATTC TCACTCTCGG CCTTCCTTCC ACGGCAGCGC CACCCACTGC 60
GCCTTCGCCG GCGGCGGAGG AGGAGGGAGG TGCGGCCATG GGTCACGGTG TCAGCTGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50089--ZF_RING_2

Pfam

PF12796--Ank_2
PF13606--Ank_3

SMART

SM00248--ANK

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0051865--P:protein autoubiquitination

KEGG

osa:4337598

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000546	Aegilops tauschii	70.77	3.00e-108	384.00
IUUC-Aml-001348	Ailuropoda melanoleuca	26.64	4.00e-17	81.60
IUUC-Atr-002541	Amborella trichopoda	67.86	6.00e-135	473.00
IUUC-Apl-004038	Anas platyrhynchos	26.67	6.00e-16	77.80
IUUC-Aca-005213	Anolis carolinensis	28.04	1.00e-17	82.80
IUUC-Ath-006849	Arabidopsis thaliana	63.77	7.00e-151	525.00
IUUC-Bta-012822	Bos taurus	27.10	7.00e-19	87.40
IUUC-Bdi-014410	Brachypodium distachyon	85.43	0.00e+00	666.00
IUUC-Bol-016185	Brassica oleracea	62.31	5.00e-135	473.00
IUUC-Bra-017665	Brassica rapa	63.02	2.00e-141	494.00
IUUC-Cel-018331	Caenorhabditis elegans	32.98	5.00e-11	62.00
IUUC-Cja-019017	Callithrix jacchus	27.01	2.00e-17	82.80
IUUC-Csa-023300	Chlorocebus sabaeus	27.62	1.00e-17	84.00
IUUC-Cho-024842	Choloepus hoffmanni	26.64	1.00e-17	83.60
IUUC-Cme-027144	Cyanidioschyzon merolae	29.49	9.00e-11	62.00
IUUC-Dre-027559	Danio rerio	31.86	3.00e-16	79.00
IUUC-Eca-033744	Equus caballus	26.64	3.00e-18	85.50
IUUC-Eeu-035003	Erinaceus europaeus	26.64	3.00e-16	78.60
IUUC-Fca-036117	Felis catus	27.44	7.00e-16	77.40
IUUC-Ggr-040007	Gaeumannomyces graminis	35.20	3.00e-19	90.50
IUUC-Gga-040483	Gallus gallus	28.10	2.00e-16	79.70
IUUC-Gma-043361	Glycine max	68.45	5.00e-144	503.00
IUUC-Ggo-045011	Gorilla gorilla	26.19	1.00e-14	73.20
IUUC-Hsa-046594	Homo sapiens	27.62	1.00e-17	83.60
IUUC-Hvu-047391	Hordeum vulgare	84.73	0.00e+00	632.00
IUUC-Lpe-050794	Leersia perrieri	96.22	0.00e+00	728.00
IUUC-Loc-052906	Lepisosteus oculatus	29.52	4.00e-18	85.10
IUUC-Laf-053858	Loxodonta africana	28.50	5.00e-19	87.80
IUUC-Mcc-055512	Macaca mulatta	27.62	1.00e-17	84.00
IUUC-Mtr-058135	Medicago truncatula	61.96	8.00e-148	515.00
IUUC-Mga-059959	Meleagris gallopavo	28.10	3.00e-17	82.00
IUUC-Mvi-060501	Microbotryum violaceum	32.69	2.00e-13	70.50
IUUC-Mmr-061498	Microcebus murinus	27.57	4.00e-18	85.10
IUUC-Mdo-061876	Monodelphis domestica	29.83	1.00e-17	83.60
IUUC-Mmu-063243	Mus musculus	32.12	3.00e-14	72.40
IUUC-Mac-065606	Musa acuminata	70.02	3.00e-166	576.00
IUUC-Nfi-068574	Neosartorya fischeri	26.95	8.00e-06	44.70
IUUC-Nle-069096	Nomascus leucogenys	28.10	5.00e-18	84.70
IUUC-Opr-070318	Ochotona princeps	27.57	9.00e-18	84.00
IUUC-Ocu-074380	Oryctolagus cuniculus	27.14	7.00e-18	84.30
IUUC-Oba-075299	Oryza barthii	95.52	0.00e+00	721.00
IUUC-Obr-076187	Oryza brachyantha	96.89	0.00e+00	717.00
IUUC-Ogl-077822	Oryza glaberrima	99.56	0.00e+00	737.00
IUUC-Ogu-078020	Oryza glumaepatula	99.56	0.00e+00	737.00
IUUC-Oin-079995	Oryza indica	99.11	0.00e+00	738.00
IUUC-Olo-080480	Oryza longistaminata	88.44	1.00e-175	608.00
IUUC-Ome-081528	Oryza meridionalis	99.11	0.00e+00	734.00
IUUC-Oni-082930	Oryza nivara	99.11	0.00e+00	735.00
IUUC-Opu-083946	Oryza punctata	98.22	0.00e+00	727.00
IUUC-Oru-084572	Oryza rufipogon	99.33	0.00e+00	733.00
IUUC-Ptr-091065	Pan troglodytes	27.62	9.00e-18	84.00
IUUC-Pan-092439	Papio anubis	27.62	9.00e-18	84.00
IUUC-Psi-093809	Pelodiscus sinensis	28.92	2.00e-17	82.80
IUUC-Pma-094342	Petromyzon marinus	31.94	6.00e-13	67.00
IUUC-Pfo-096806	Poecilia formosa	31.71	3.00e-15	75.90
IUUC-Pab-098233	Pongo abelii	27.62	1.00e-17	83.60
IUUC-Pop-099715	Populus trichocarpa	66.67	9.00e-154	535.00
IUUC-Ppe-101736	Prunus persica	67.71	5.00e-158	549.00
IUUC-Pva-102452	Pteropus vampyrus	32.09	4.00e-15	73.90
IUUC-Spo-108118	Schizosaccharomyces pombe	35.33	2.00e-11	63.50
IUUC-Smo-109510	Selaginella moellendorffii	47.29	2.00e-85	308.00
IUUC-Sit-109748	Setaria italica	88.79	0.00e+00	686.00
IUUC-Sly-111372	Solanum lycopersicum	66.96	2.00e-162	564.00
IUUC-Stu-112634	Solanum tuberosum	67.56	5.00e-161	559.00
IUUC-Sar-113706	Sorex araneus	29.76	1.00e-15	77.00
IUUC-Sbi-114008	Sorghum bicolor	83.69	0.00e+00	672.00
IUUC-Sre-115192	Sporisorium reilianum	30.32	1.00e-08	55.10
IUUC-Tgu-116719	Taeniopygia guttata	29.86	1.00e-17	83.60
IUUC-Tru-117639	Takifugu rubripes	31.37	2.00e-15	76.30
IUUC-Tsy-119128	Tarsius syrichta	26.64	2.00e-17	82.80
IUUC-Tca-121216	Theobroma cacao	67.48	4.00e-164	569.00
IUUC-Tae-123509	Triticum aestivum	86.09	0.00e+00	642.00
IUUC-Tur-126367	Triticum urartu	76.82	5.00e-126	442.00
IUUC-Tme-127091	Tuber melanosporum	40.48	2.00e-04	37.70
IUUC-Ttr-128239	Tursiops truncatus	26.64	9.00e-18	84.00
IUUC-Vda-129784	Verticillium dahliae	34.85	5.00e-18	85.90
IUUC-Vpa-130131	Vicugna pacos	26.64	4.00e-18	85.10
IUUC-Vvi-130914	Vitis vinifera	73.33	9.00e-159	551.00
IUUC-Xtr-132164	Xenopus tropicalis	30.89	2.00e-13	69.30
IUUC-Xma-133461	Xiphophorus maculatus	28.99	1.00e-13	70.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence