iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000010764.1	ENSONIT00000013542.1	ENSONIP00000013532.1
ENSONIG00000010764.1	ENSONIT00000013543.1	ENSONIP00000013533.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-12	47.2	585	609

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWD 29
           + +++ s+ + +++G   g + ++D
   Q: 585  NRVRWsSGgKEVAVGDSEGRVWIYD 609
           66899877899*************9 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKETESQ QKTEATPEDS DLDRKRRETE 60
ALLQSIGISP EPPLVLDLFF NLSMTCSLLF SVPTPVSPSK SVSTPSETGS QDSADGGAAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGACA AAAGCGACCT AAAAGCTGAG CTTGAGCGCA AGAAGCAGCG CCTTGCCCAG 60
ATCAGGGAGG AGAAGAAGAG GAAGGAGGAG GAGAGGAAGA AGAAAGAGGT AAGGAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0007018--P:microtubule-based movement

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	79.82	0.00e+00	986.00
IUUC-Aca-004659	Anolis carolinensis	77.16	0.00e+00	973.00
IUUC-Ame-010879	Astyanax mexicanus	85.85	0.00e+00	1071.00
IUUC-Bta-013557	Bos taurus	76.70	0.00e+00	933.00
IUUC-Cja-018913	Callithrix jacchus	79.82	0.00e+00	986.00
IUUC-Cfa-020794	Canis familiaris	79.32	0.00e+00	976.00
IUUC-Csa-023506	Chlorocebus sabaeus	78.86	0.00e+00	973.00
IUUC-Cho-025102	Choloepus hoffmanni	67.18	0.00e+00	778.00
IUUC-Dre-028093	Danio rerio	74.62	0.00e+00	948.00
IUUC-Dor-030613	Dipodomys ordii	79.66	0.00e+00	986.00
IUUC-Ete-032322	Echinops telfairi	68.72	0.00e+00	799.00
IUUC-Eca-033324	Equus caballus	79.66	0.00e+00	987.00
IUUC-Fca-036050	Felis catus	75.37	0.00e+00	890.00
IUUC-Fal-037664	Ficedula albicollis	78.58	0.00e+00	978.00
IUUC-Gmo-038624	Gadus morhua	83.18	0.00e+00	966.00
IUUC-Gga-040886	Gallus gallus	79.17	0.00e+00	981.00
IUUC-Gac-042215	Gasterosteus aculeatus	86.42	0.00e+00	1008.00
IUUC-Ggo-045363	Gorilla gorilla	79.66	0.00e+00	987.00
IUUC-Hsa-046861	Homo sapiens	79.66	0.00e+00	987.00
IUUC-Kpa-049295	Komagataella pastoris	28.65	1.00e-33	137.00
IUUC-Loc-052873	Lepisosteus oculatus	83.85	0.00e+00	1038.00
IUUC-Laf-053494	Loxodonta africana	80.12	0.00e+00	986.00
IUUC-Mcc-055731	Macaca mulatta	79.51	0.00e+00	983.00
IUUC-Mmr-060828	Microcebus murinus	79.35	0.00e+00	983.00
IUUC-Mmu-063862	Mus musculus	79.51	0.00e+00	983.00
IUUC-Mpu-066835	Mustela putorius furo	79.48	0.00e+00	978.00
IUUC-Mlu-067993	Myotis lucifugus	79.26	0.00e+00	982.00
IUUC-Nle-069711	Nomascus leucogenys	79.66	0.00e+00	985.00
IUUC-Opr-070509	Ochotona princeps	77.87	0.00e+00	930.00
IUUC-Ocu-074398	Oryctolagus cuniculus	78.55	0.00e+00	967.00
IUUC-Ola-087168	Oryzias latipes	84.88	0.00e+00	1017.00
IUUC-Oar-090454	Ovis aries	79.63	0.00e+00	983.00
IUUC-Ptr-090850	Pan troglodytes	79.66	0.00e+00	987.00
IUUC-Pan-092449	Papio anubis	78.86	0.00e+00	973.00
IUUC-Psi-093490	Pelodiscus sinensis	79.32	0.00e+00	972.00
IUUC-Pfo-096530	Poecilia formosa	96.51	0.00e+00	911.00
IUUC-Pab-098252	Pongo abelii	79.51	0.00e+00	983.00
IUUC-Pca-100827	Procavia capensis	88.20	7.00e-168	583.00
IUUC-Pva-102223	Pteropus vampyrus	74.73	0.00e+00	914.00
IUUC-Rno-105683	Rattus norvegicus	79.82	0.00e+00	982.00
IUUC-Ssc-115238	Sus scrofa	81.00	0.00e+00	897.00
IUUC-Ttr-129188	Tursiops truncatus	79.82	0.00e+00	989.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence