iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114797

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G171800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g021660	Sb08g021660.1	Sb08g021660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-16	60.3	282	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d..tllvsGsdDgtikvWDlr 31
           +  +l++s+s Dg i++WD+r
   Q: 282  EfcNLIASASSDGIIRIWDVR 302
           34489**************97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALVAGSYER FIWGFSLKTL TSPSASTTAT GASSSETLTL APLFSYPAHT GPVRCVAAAP 60
RAGLAASGGA DDSVRLYDLP SAADLGPLLD PSAAVSALAF YSRGPVPRNL LAACDDGALL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCCTTTC TCCCCAACGA AACCGGCGGC GGCGCGAGGG CTTTGCTTGC TGCTGCCATG 60
GCTCTCGTCG CCGGCTCCTA CGAGCGCTTC ATCTGGGGCT TCTCCCTCAA AACCCTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus

KEGG

sbi:SORBI_08g021660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000839	Aegilops tauschii	80.92	2.00e-55	206.00
IUUC-Aml-001803	Ailuropoda melanoleuca	29.63	1.00e-34	139.00
IUUC-Atr-003018	Amborella trichopoda	40.06	2.00e-69	255.00
IUUC-Apl-004199	Anas platyrhynchos	30.80	7.00e-35	140.00
IUUC-Aca-005157	Anolis carolinensis	30.65	2.00e-29	122.00
IUUC-Aly-006245	Arabidopsis lyrata	48.82	2.00e-82	298.00
IUUC-Ath-007309	Arabidopsis thaliana	49.11	8.00e-84	302.00
IUUC-Ago-007878	Ashbya gossypii	23.34	1.00e-17	83.20
IUUC-Ame-011121	Astyanax mexicanus	31.69	4.00e-37	147.00
IUUC-Bta-012383	Bos taurus	28.70	1.00e-33	136.00
IUUC-Bdi-014505	Brachypodium distachyon	80.06	3.00e-113	400.00
IUUC-Bol-015458	Brassica oleracea	48.52	3.00e-83	300.00
IUUC-Bra-017790	Brassica rapa	48.52	5.00e-83	300.00
IUUC-Cja-018803	Callithrix jacchus	27.76	4.00e-29	121.00
IUUC-Cfa-020178	Canis familiaris	29.63	1.00e-36	145.00
IUUC-Cpo-021785	Cavia porcellus	29.63	2.00e-33	135.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	33.00	6.00e-33	135.00
IUUC-Csa-023179	Chlorocebus sabaeus	29.01	7.00e-35	140.00
IUUC-Cho-025088	Choloepus hoffmanni	30.00	2.00e-26	112.00
IUUC-Csv-025887	Ciona savignyi	25.97	1.00e-22	99.40
IUUC-Cne-027021	Cryptococcus neoformans	30.58	3.00e-14	73.90
IUUC-Dre-027360	Danio rerio	30.56	2.00e-40	158.00
IUUC-Dno-029836	Dasypus novemcinctus	29.54	3.00e-35	141.00
IUUC-Dor-030677	Dipodomys ordii	27.48	1.00e-29	122.00
IUUC-Ete-032837	Echinops telfairi	28.76	5.00e-31	127.00
IUUC-Eca-033291	Equus caballus	29.63	3.00e-34	138.00
IUUC-Eeu-035347	Erinaceus europaeus	28.67	3.00e-29	120.00
IUUC-Fca-036577	Felis catus	28.70	1.00e-34	140.00
IUUC-Fal-036810	Ficedula albicollis	27.73	1.00e-31	129.00
IUUC-Gmo-038537	Gadus morhua	31.34	4.00e-31	127.00
IUUC-Gga-040566	Gallus gallus	30.28	7.00e-38	150.00
IUUC-Gac-042422	Gasterosteus aculeatus	30.58	4.00e-34	137.00
IUUC-Gma-044199	Glycine max	50.00	8.00e-81	292.00
IUUC-Ggo-045365	Gorilla gorilla	26.75	2.00e-24	105.00
IUUC-Hsa-046121	Homo sapiens	29.32	4.00e-35	141.00
IUUC-Hvu-047592	Hordeum vulgare	82.53	4.00e-73	265.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	29.18	7.00e-31	127.00
IUUC-Kpa-049407	Komagataella pastoris	23.55	8.00e-22	97.10
IUUC-Lch-049767	Latimeria chalumnae	27.78	1.00e-34	139.00
IUUC-Lpe-051569	Leersia perrieri	74.93	3.00e-113	400.00
IUUC-Loc-051940	Lepisosteus oculatus	28.44	3.00e-30	125.00
IUUC-Laf-054463	Loxodonta africana	28.62	2.00e-32	132.00
IUUC-Mcc-055412	Macaca mulatta	29.32	3.00e-35	141.00
IUUC-Mtr-057886	Medicago truncatula	51.81	1.00e-81	295.00
IUUC-Mga-060109	Meleagris gallopavo	30.38	9.00e-35	139.00
IUUC-Mmr-060681	Microcebus murinus	28.70	1.00e-34	139.00
IUUC-Mdo-063004	Monodelphis domestica	29.94	8.00e-38	150.00
IUUC-Mmu-064184	Mus musculus	29.23	3.00e-33	134.00
IUUC-Mac-064987	Musa acuminata	54.63	5.00e-93	333.00
IUUC-Mpu-065847	Mustela putorius furo	29.94	6.00e-35	140.00
IUUC-Mlu-067608	Myotis lucifugus	30.25	5.00e-34	137.00
IUUC-Nle-069302	Nomascus leucogenys	28.70	4.00e-34	138.00
IUUC-Ont-072591	Oreochromis niloticus	29.45	8.00e-31	126.00
IUUC-Oan-073558	Ornithorhynchus anatinus	28.46	3.00e-27	114.00
IUUC-Ocu-074558	Oryctolagus cuniculus	26.23	9.00e-30	123.00
IUUC-Obr-076509	Oryza brachyantha	79.39	2.00e-60	223.00
IUUC-Ogl-076960	Oryza glaberrima	76.81	4.00e-115	406.00
IUUC-Ogu-078660	Oryza glumaepatula	74.40	2.00e-108	384.00
IUUC-Oin-079790	Oryza indica	76.51	4.00e-124	436.00
IUUC-Ome-081631	Oryza meridionalis	76.35	3.00e-94	337.00
IUUC-Oni-083082	Oryza nivara	76.51	1.00e-114	405.00
IUUC-Opu-083394	Oryza punctata	78.01	8.00e-128	449.00
IUUC-Oru-084461	Oryza rufipogon	75.90	3.00e-114	404.00
IUUC-Osa-085655	Oryza sativa	77.20	3.00e-110	390.00
IUUC-Ola-086955	Oryzias latipes	31.29	1.00e-37	149.00
IUUC-Olu-087657	Ostreococcus lucimarinus	31.27	9.00e-26	110.00
IUUC-Oga-088108	Otolemur garnettii	29.32	4.00e-35	141.00
IUUC-Oar-090019	Ovis aries	29.01	2.00e-33	135.00
IUUC-Ptr-091544	Pan troglodytes	29.32	3.00e-35	141.00
IUUC-Pan-092562	Papio anubis	29.32	3.00e-35	141.00
IUUC-Psi-094025	Pelodiscus sinensis	33.20	1.00e-24	106.00
IUUC-Pma-094322	Petromyzon marinus	30.38	2.00e-26	111.00
IUUC-Ppa-095541	Physcomitrella patens	34.41	1.00e-51	196.00
IUUC-Pfo-096667	Poecilia formosa	31.10	9.00e-25	106.00
IUUC-Pab-098064	Pongo abelii	29.32	7.00e-35	140.00
IUUC-Pop-099969	Populus trichocarpa	51.82	2.00e-83	301.00
IUUC-Pca-101053	Procavia capensis	30.86	1.00e-33	136.00
IUUC-Ppe-101839	Prunus persica	52.24	2.00e-88	318.00
IUUC-Pva-102963	Pteropus vampyrus	28.09	4.00e-31	127.00
IUUC-Rno-105975	Rattus norvegicus	31.17	1.00e-33	136.00
IUUC-Sce-106226	Saccharomyces cerevisiae	22.59	6.00e-16	77.80
IUUC-Sha-106907	Sarcophilus harrisii	29.32	5.00e-38	150.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	23.62	2.00e-17	82.40
IUUC-Smo-108738	Selaginella moellendorffii	37.35	4.00e-56	210.00
IUUC-Sit-110114	Setaria italica	86.97	3.00e-139	486.00
IUUC-Sly-111581	Solanum lycopersicum	47.01	4.00e-83	300.00
IUUC-Stu-112770	Solanum tuberosum	46.41	7.00e-83	299.00
IUUC-Sre-114941	Sporisorium reilianum	28.15	7.00e-22	97.80
IUUC-Ssc-116346	Sus scrofa	30.25	3.00e-36	144.00
IUUC-Tgu-116628	Taeniopygia guttata	30.28	3.00e-34	138.00
IUUC-Tru-117646	Takifugu rubripes	28.22	7.00e-33	133.00
IUUC-Tsy-119593	Tarsius syrichta	26.41	3.00e-17	82.00
IUUC-Tni-119872	Tetraodon nigroviridis	30.18	3.00e-36	144.00
IUUC-Tca-121500	Theobroma cacao	51.65	2.00e-87	314.00
IUUC-Tae-125015	Triticum aestivum	80.06	2.00e-126	444.00
IUUC-Tur-126015	Triticum urartu	80.15	2.00e-55	206.00
IUUC-Tbe-127959	Tupaia belangeri	29.18	1.00e-27	115.00
IUUC-Ttr-129125	Tursiops truncatus	30.56	4.00e-36	144.00
IUUC-Vvi-131065	Vitis vinifera	50.60	2.00e-78	284.00
IUUC-Xtr-132601	Xenopus tropicalis	27.71	3.00e-26	111.00
IUUC-Xma-133142	Xiphophorus maculatus	31.10	3.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence