iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116010

Ensembl Protein ID

ENSSSCP00000025799.1

UniProt Accession

I3LNX4; I3LNX4_PIG

Genbank Protein ID

ENSSSCP00000025799

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312617

Gene Name

NXF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000022866.1	ENSSSCT00000029108.1	ENSSSCP00000025799.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	24.20	2.00e-10	62.40	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MADEGKSYNE HDDRVSFPQR RKKGRGPFRW KCGEGNRRSA RGGSSIRSSR LEEDDRDVAV 60
SDAQDVPRLR YNPYAPRPNR RGDGWHERSR IHVTVPLRRD RVPPERGGAG TSQDGTSKNW 120

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Nucleotide Sequence
(Fasta)

ATAAATGCGG CGGCATCCGG CGTAGGAGCA CTTCAGCCGG GAGAGCCTGG GCGTTCGGAC 60
GTTTGCCGGT GTCGCGGGCC GCGACAGAGC CCGCCCCTGC TCGCTGCGCC ATGGCGGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR002075--NTF2
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR012677--Nucleotide-bd_a/b_plait
IPR030217--NXF_fam
IPR000504--RRM_dom
IPR005637--TAP_C_dom
IPR015245--Tap_RNA-bd
IPR009060--UBA-like

PROSITE

PS51450--LRR
PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF02136--NTF2
PF09162--Tap-RNA_bind
PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042405--C:nuclear inclusion body
GO:0005643--C:nuclear pore
GO:0016607--C:nuclear speck
GO:0005634--C:nucleus
GO:0000346--C:transcription export complex
GO:0003729--F:mRNA binding
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0000166--F:nucleotide binding
GO:0003727--F:single-stranded RNA binding
GO:0016973--P:poly(A)+ mRNA export from nucleus

KEGG

ssc:100628213

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	92.70	0.00e+00	1083.00
IUUC-Apl-003526	Anas platyrhynchos	34.09	1.20e-02	33.10
IUUC-Aca-005187	Anolis carolinensis	68.26	0.00e+00	738.00
IUUC-Ago-007780	Ashbya gossypii	23.06	3.00e-18	86.30
IUUC-Acl-008191	Aspergillus clavatus	25.10	6.00e-22	99.00
IUUC-Afl-008512	Aspergillus flavus	26.34	7.00e-26	112.00
IUUC-Afu-009048	Aspergillus fumigatus	25.97	3.00e-25	110.00
IUUC-Ani-009320	Aspergillus nidulans	22.61	9.00e-19	88.60
IUUC-Ang-009834	Aspergillus niger	24.74	1.00e-20	94.40
IUUC-Aor-010039	Aspergillus oryzae	25.88	4.00e-22	99.40
IUUC-Ate-010321	Aspergillus terreus	25.21	1.00e-20	94.40
IUUC-Ame-011034	Astyanax mexicanus	57.99	0.00e+00	646.00
IUUC-Bgr-012142	Blumeria graminis	26.29	5.00e-19	89.40
IUUC-Bta-013268	Bos taurus	95.00	0.00e+00	1090.00
IUUC-Bci-013951	Botrytis cinerea	27.16	4.00e-21	96.30
IUUC-Cel-018213	Caenorhabditis elegans	33.33	3.90e-01	28.10
IUUC-Cja-019064	Callithrix jacchus	92.43	0.00e+00	1063.00
IUUC-Cfa-020712	Canis familiaris	93.12	0.00e+00	1049.00
IUUC-Cpo-021814	Cavia porcellus	92.74	0.00e+00	1073.00
IUUC-Csa-023652	Chlorocebus sabaeus	92.91	0.00e+00	1077.00
IUUC-Cho-024546	Choloepus hoffmanni	48.48	1.30e-01	29.60
IUUC-Cin-025669	Ciona intestinalis	34.64	1.00e-93	336.00
IUUC-Csv-025957	Ciona savignyi	35.77	5.00e-85	308.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	27.49	1.00e-27	118.00
IUUC-Cne-026967	Cryptococcus neoformans	21.80	8.00e-06	45.10
IUUC-Dre-028476	Danio rerio	54.79	3.00e-150	525.00
IUUC-Dno-029301	Dasypus novemcinctus	90.97	0.00e+00	1038.00
IUUC-Dor-030764	Dipodomys ordii	92.75	0.00e+00	1064.00
IUUC-Dse-031489	Dothistroma septosporum	24.89	8.00e-18	85.10
IUUC-Dme-031623	Drosophila melanogaster	31.76	6.00e-76	278.00
IUUC-Ete-032992	Echinops telfairi	78.42	0.00e+00	801.00
IUUC-Eca-033208	Equus caballus	94.30	0.00e+00	1032.00
IUUC-Eeu-034759	Erinaceus europaeus	90.65	0.00e+00	1062.00
IUUC-Fca-035671	Felis catus	94.52	0.00e+00	1095.00
IUUC-Fal-036625	Ficedula albicollis	34.09	1.80e-02	32.70
IUUC-Fox-037892	Fusarium oxysporum	28.42	3.00e-20	93.20
IUUC-Fso-038402	Fusarium solani	27.42	4.00e-19	89.40
IUUC-Gmo-039325	Gadus morhua	55.36	5.00e-150	524.00
IUUC-Ggr-039736	Gaeumannomyces graminis	24.07	2.00e-12	67.80
IUUC-Gga-040508	Gallus gallus	70.67	0.00e+00	785.00
IUUC-Gac-041798	Gasterosteus aculeatus	57.12	0.00e+00	694.00
IUUC-Ggo-044655	Gorilla gorilla	93.11	0.00e+00	1046.00
IUUC-Hsa-047028	Homo sapiens	93.08	0.00e+00	1078.00
IUUC-Itr-048415	Ictidomys tridecemlineatus	88.89	0.00e+00	1048.00
IUUC-Kpa-049280	Komagataella pastoris	24.07	5.00e-22	99.00
IUUC-Lch-049501	Latimeria chalumnae	70.06	0.00e+00	836.00
IUUC-Loc-052299	Lepisosteus oculatus	63.35	3.00e-171	594.00
IUUC-Laf-053523	Loxodonta africana	91.45	0.00e+00	1061.00
IUUC-Mcc-055389	Macaca mulatta	93.76	0.00e+00	1006.00
IUUC-Meu-056620	Macropus eugenii	57.67	5.00e-140	490.00
IUUC-Mor-057232	Magnaporthe oryzae	28.38	3.00e-27	116.00
IUUC-Mpo-057539	Magnaporthe poae	24.24	9.00e-12	65.10
IUUC-Mla-059053	Melampsora laricipopulina	25.15	4.00e-25	109.00
IUUC-Mga-059220	Meleagris gallopavo	34.09	1.10e-02	33.10
IUUC-Mvi-060283	Microbotryum violaceum	25.05	2.00e-21	97.40
IUUC-Mmr-061583	Microcebus murinus	94.03	0.00e+00	1087.00
IUUC-Mdo-062158	Monodelphis domestica	80.55	0.00e+00	936.00
IUUC-Mmu-064202	Mus musculus	88.23	0.00e+00	1010.00
IUUC-Mpu-065730	Mustela putorius furo	93.87	0.00e+00	1087.00
IUUC-Mlu-066975	Myotis lucifugus	92.28	0.00e+00	1028.00
IUUC-Nfi-068368	Neosartorya fischeri	25.97	9.00e-24	105.00
IUUC-Ncr-068724	Neurospora crassa	25.74	1.00e-17	84.70
IUUC-Nle-069816	Nomascus leucogenys	92.75	0.00e+00	1069.00
IUUC-Opr-070244	Ochotona princeps	43.52	3.00e-128	452.00
IUUC-Ont-072608	Oreochromis niloticus	57.94	0.00e+00	711.00
IUUC-Oan-073580	Ornithorhynchus anatinus	33.63	7.00e-03	33.90
IUUC-Ocu-074226	Oryctolagus cuniculus	91.63	0.00e+00	1108.00
IUUC-Ola-087008	Oryzias latipes	63.82	0.00e+00	672.00
IUUC-Oga-088317	Otolemur garnettii	89.57	0.00e+00	983.00
IUUC-Oar-089720	Ovis aries	94.68	0.00e+00	1061.00
IUUC-Ptr-091148	Pan troglodytes	93.08	0.00e+00	1078.00
IUUC-Pan-091764	Papio anubis	92.91	0.00e+00	1075.00
IUUC-Psi-094071	Pelodiscus sinensis	65.51	0.00e+00	785.00
IUUC-Pno-095045	Phaeosphaeria nodorum	28.57	5.00e-04	38.50
IUUC-Pfo-096500	Poecilia formosa	59.37	0.00e+00	724.00
IUUC-Pab-098014	Pongo abelii	91.30	0.00e+00	1071.00
IUUC-Pca-100121	Procavia capensis	89.68	0.00e+00	1009.00
IUUC-Pva-102865	Pteropus vampyrus	94.03	0.00e+00	1045.00
IUUC-Pgr-103333	Puccinia graminis	24.39	2.00e-16	80.50
IUUC-Ptt-103702	Puccinia triticina	24.08	2.00e-20	93.60
IUUC-Rno-106100	Rattus norvegicus	89.68	0.00e+00	1029.00
IUUC-Sce-106429	Saccharomyces cerevisiae	22.99	4.00e-15	76.30
IUUC-Sha-106834	Sarcophilus harrisii	80.67	0.00e+00	955.00
IUUC-Sja-107818	Schizosaccharomyces japonicus	26.46	3.00e-21	96.70
IUUC-Spo-108301	Schizosaccharomyces pombe	27.25	4.00e-34	139.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	25.87	3.00e-21	96.70
IUUC-Sar-112963	Sorex araneus	46.17	9.00e-127	446.00
IUUC-Sre-114950	Sporisorium reilianum	23.37	2.00e-21	97.10
IUUC-Tgu-116603	Taeniopygia guttata	35.23	6.00e-03	34.30
IUUC-Tru-118148	Takifugu rubripes	57.78	0.00e+00	685.00
IUUC-Tsy-119506	Tarsius syrichta	36.46	1.00e-04	40.00
IUUC-Tni-120552	Tetraodon nigroviridis	40.74	1.00e-03	36.60
IUUC-Tre-121894	Trichoderma reesei	26.41	2.00e-27	117.00
IUUC-Tvi-122501	Trichoderma virens	27.74	6.00e-32	132.00
IUUC-Tme-127084	Tuber melanosporum	25.35	2.00e-27	117.00
IUUC-Tbe-127980	Tupaia belangeri	63.04	7.00e-89	320.00
IUUC-Ttr-128656	Tursiops truncatus	56.72	0.00e+00	665.00
IUUC-Uma-129530	Ustilago maydis	24.38	1.00e-26	114.00
IUUC-Vda-129709	Verticillium dahliae	27.23	2.00e-22	100.00
IUUC-Vpa-130739	Vicugna pacos	45.66	8.00e-102	363.00
IUUC-Xtr-132404	Xenopus tropicalis	60.13	0.00e+00	728.00
IUUC-Xma-133051	Xiphophorus maculatus	58.04	0.00e+00	698.00
IUUC-Yli-134681	Yarrowia lipolytica	25.12	8.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence