iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107466

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01222402

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000017108.1	ENSSHAT00000020327.1	ENSSHAP00000020167.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-09	38.1	215	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+ +vt +++    d+ll+++s D t+k+WDlr+ 
   Q: 215  HKKKVTHVSLnplCDWLLATASVDQTVKIWDLRQI 249
           7888999999988779****************975 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MIGWGTGRNT YLLCLAGSGK GDGAGVGWKQ RALIGQRESP YSIIWALHQH ILGAPQPSFH 60
QQCLQKVFLH SLGSYRLFRT ASPFDRRTTC LEWHPTHPST LAVGSKGGDI ILWDYEVLDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGGTT GGGGAACAGG GAGAAACACT TATCTCTTGT GCTTGGCAGG CTCTGGCAAA 60
GGGGATGGTG CTGGGGTAGG CTGGAAACAG CGTGCATTGA TTGGTCAGAG GGAATCCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	33.04	9.00e-40	157.00
IUUC-Aml-002203	Ailuropoda melanoleuca	69.49	3.00e-160	557.00
IUUC-Atr-002957	Amborella trichopoda	34.72	4.00e-43	169.00
IUUC-Apl-003832	Anas platyrhynchos	62.00	1.00e-138	486.00
IUUC-Aca-004358	Anolis carolinensis	65.17	5.00e-145	507.00
IUUC-Aly-006296	Arabidopsis lyrata	33.63	2.00e-42	166.00
IUUC-Ath-007115	Arabidopsis thaliana	33.24	3.00e-43	169.00
IUUC-Ame-010817	Astyanax mexicanus	59.42	2.00e-134	472.00
IUUC-Bta-012914	Bos taurus	68.80	6.00e-158	550.00
IUUC-Bdi-014261	Brachypodium distachyon	34.23	1.00e-40	160.00
IUUC-Bol-015317	Brassica oleracea	33.53	2.00e-41	163.00
IUUC-Bra-016848	Brassica rapa	33.73	2.00e-42	166.00
IUUC-Cja-018967	Callithrix jacchus	67.60	3.00e-155	541.00
IUUC-Cfa-021238	Canis familiaris	68.80	6.00e-151	526.00
IUUC-Cpo-022063	Cavia porcellus	67.23	6.00e-146	510.00
IUUC-Csa-023382	Chlorocebus sabaeus	67.35	3.00e-154	538.00
IUUC-Cho-024805	Choloepus hoffmanni	56.33	7.00e-68	249.00
IUUC-Dre-028732	Danio rerio	55.26	4.00e-116	411.00
IUUC-Dor-030461	Dipodomys ordii	69.29	1.00e-105	376.00
IUUC-Ete-033038	Echinops telfairi	63.71	2.00e-136	478.00
IUUC-Eca-033772	Equus caballus	68.03	4.00e-150	524.00
IUUC-Eeu-034662	Erinaceus europaeus	68.47	5.00e-42	165.00
IUUC-Fca-036095	Felis catus	67.77	4.00e-151	527.00
IUUC-Gmo-039683	Gadus morhua	54.57	1.00e-114	406.00
IUUC-Gga-040530	Gallus gallus	63.27	3.00e-138	484.00
IUUC-Gac-041517	Gasterosteus aculeatus	53.74	4.00e-105	374.00
IUUC-Gma-043378	Glycine max	33.63	2.00e-42	167.00
IUUC-Ggo-045364	Gorilla gorilla	68.11	7.00e-156	543.00
IUUC-Hsa-046354	Homo sapiens	68.11	9.00e-156	542.00
IUUC-Hvu-047151	Hordeum vulgare	33.22	7.00e-32	130.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	68.85	1.00e-155	542.00
IUUC-Lpe-051256	Leersia perrieri	33.84	8.00e-39	154.00
IUUC-Loc-052398	Lepisosteus oculatus	63.93	4.00e-140	491.00
IUUC-Laf-053562	Loxodonta africana	70.51	1.00e-153	536.00
IUUC-Mcc-055197	Macaca mulatta	73.02	4.00e-124	437.00
IUUC-Meu-056151	Macropus eugenii	88.77	5.00e-141	493.00
IUUC-Mtr-057940	Medicago truncatula	32.65	2.00e-41	163.00
IUUC-Mga-059923	Meleagris gallopavo	63.27	1.00e-145	509.00
IUUC-Mmr-061465	Microcebus murinus	75.09	1.00e-124	439.00
IUUC-Mdo-063063	Monodelphis domestica	85.75	0.00e+00	682.00
IUUC-Mmu-064294	Mus musculus	70.86	4.00e-149	520.00
IUUC-Mac-065598	Musa acuminata	32.63	2.00e-36	147.00
IUUC-Mpu-066831	Mustela putorius furo	68.80	1.00e-151	528.00
IUUC-Mlu-067222	Myotis lucifugus	66.67	2.00e-151	528.00
IUUC-Nle-069581	Nomascus leucogenys	67.86	5.00e-156	543.00
IUUC-Opr-070644	Ochotona princeps	71.27	4.00e-153	534.00
IUUC-Ont-072605	Oreochromis niloticus	57.37	4.00e-123	434.00
IUUC-Oan-072973	Ornithorhynchus anatinus	78.55	7.00e-164	569.00
IUUC-Ocu-074615	Oryctolagus cuniculus	70.28	2.00e-154	538.00
IUUC-Oba-075283	Oryza barthii	33.84	4.00e-38	152.00
IUUC-Obr-076605	Oryza brachyantha	33.23	8.00e-40	158.00
IUUC-Ogl-077512	Oryza glaberrima	33.84	3.00e-38	152.00
IUUC-Ogu-078329	Oryza glumaepatula	33.84	3.00e-38	152.00
IUUC-Oin-079980	Oryza indica	33.84	5.00e-38	152.00
IUUC-Olo-080516	Oryza longistaminata	33.54	1.00e-38	154.00
IUUC-Ome-081415	Oryza meridionalis	33.84	4.00e-38	152.00
IUUC-Oni-082985	Oryza nivara	33.84	5.00e-38	152.00
IUUC-Opu-084159	Oryza punctata	34.15	1.00e-39	157.00
IUUC-Oru-085137	Oryza rufipogon	33.84	2.00e-38	153.00
IUUC-Osa-085614	Oryza sativa	33.84	2.00e-38	153.00
IUUC-Ola-087044	Oryzias latipes	50.14	2.00e-108	386.00
IUUC-Oga-088274	Otolemur garnettii	71.75	7.00e-156	543.00
IUUC-Oar-089826	Ovis aries	68.37	6.00e-158	550.00
IUUC-Ptr-091631	Pan troglodytes	68.11	9.00e-156	542.00
IUUC-Pan-092535	Papio anubis	67.86	7.00e-156	543.00
IUUC-Psi-093815	Pelodiscus sinensis	64.91	1.00e-136	479.00
IUUC-Pma-094474	Petromyzon marinus	48.69	5.00e-98	350.00
IUUC-Ppa-095414	Physcomitrella patens	30.63	3.00e-32	133.00
IUUC-Pfo-096559	Poecilia formosa	53.37	1.00e-109	389.00
IUUC-Pab-098528	Pongo abelii	67.86	1.00e-155	542.00
IUUC-Pop-100064	Populus trichocarpa	31.27	5.00e-40	159.00
IUUC-Pca-100803	Procavia capensis	67.10	4.00e-147	514.00
IUUC-Ppe-101966	Prunus persica	30.56	1.00e-38	154.00
IUUC-Pva-103213	Pteropus vampyrus	65.98	1.00e-147	515.00
IUUC-Rno-105087	Rattus norvegicus	70.22	1.00e-148	519.00
IUUC-Smo-108958	Selaginella moellendorffii	31.52	2.00e-34	140.00
IUUC-Sit-109968	Setaria italica	32.62	4.00e-36	145.00
IUUC-Sly-111495	Solanum lycopersicum	32.63	7.00e-39	155.00
IUUC-Sar-113272	Sorex araneus	69.76	1.00e-141	495.00
IUUC-Sbi-114706	Sorghum bicolor	30.56	8.00e-32	131.00
IUUC-Ssc-115615	Sus scrofa	67.34	1.00e-152	532.00
IUUC-Tgu-116602	Taeniopygia guttata	60.50	6.00e-134	470.00
IUUC-Tru-118698	Takifugu rubripes	52.75	2.00e-105	375.00
IUUC-Tsy-119027	Tarsius syrichta	63.04	5.00e-130	457.00
IUUC-Tni-119787	Tetraodon nigroviridis	50.67	3.00e-110	391.00
IUUC-Tca-121447	Theobroma cacao	31.83	7.00e-39	154.00
IUUC-Tae-123253	Triticum aestivum	33.63	3.00e-40	159.00
IUUC-Tur-126724	Triticum urartu	33.33	4.00e-40	159.00
IUUC-Tbe-127680	Tupaia belangeri	68.36	9.00e-110	389.00
IUUC-Ttr-128201	Tursiops truncatus	59.59	3.00e-123	434.00
IUUC-Vpa-130451	Vicugna pacos	51.68	2.00e-60	226.00
IUUC-Vvi-131001	Vitis vinifera	34.99	3.00e-44	172.00
IUUC-Xtr-132266	Xenopus tropicalis	64.80	2.00e-142	499.00
IUUC-Xma-133034	Xiphophorus maculatus	57.14	3.00e-123	434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence