iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	36.4	170	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadCl.qkwpglknssskefrCPlC 45
           C++C+e ++d     +v+ CgH++h dC+ q++        ++ rCP+C
   Q: 170  CPVCYEYLFDSvkaAHVMKCGHTMHMDCFeQMI------NENQYRCPIC 212
           ******996653336789***********7777......9********* PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGGSASLQSD SMEAAAAADS SIPRDKDFGK FQFGCEHYKR RCKIRAPCCN LIFSCRHCHN 60
DSANSLPDPK ERHDLVRQNV KQVVCSICQT EQEVAKVCSN CGVNMGEYFC DICKFFDDDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATAATCG ACTGTCTAAT TAACCTTGTA CACCACAATT TTAAAGTTGT TCATGCAAAA 60
ACGTAACAAC AAAGTGAGTA TTGGATAAAA AAGAATCCAA TCAGAACATT ATTAACTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002312	Ailuropoda melanoleuca	46.15	1.00e-63	235.00
IUUC-Aly-005993	Arabidopsis lyrata	91.96	6.00e-157	545.00
IUUC-Bta-013191	Bos taurus	46.83	6.00e-62	229.00
IUUC-Bol-015118	Brassica oleracea	77.00	8.00e-136	475.00
IUUC-Cja-019581	Callithrix jacchus	45.45	3.00e-65	240.00
IUUC-Cfa-021051	Canis familiaris	47.41	1.00e-63	235.00
IUUC-Cpo-022137	Cavia porcellus	49.02	1.00e-39	154.00
IUUC-Csa-024259	Chlorocebus sabaeus	45.45	5.00e-65	240.00
IUUC-Cho-024855	Choloepus hoffmanni	43.70	5.00e-58	216.00
IUUC-Dre-028584	Danio rerio	47.76	9.00e-67	246.00
IUUC-Dor-030930	Dipodomys ordii	39.61	9.00e-41	159.00
IUUC-Eca-033470	Equus caballus	46.47	5.00e-58	216.00
IUUC-Fca-035728	Felis catus	45.77	2.00e-61	228.00
IUUC-Gmo-038620	Gadus morhua	44.09	1.00e-57	215.00
IUUC-Gga-040156	Gallus gallus	45.56	6.00e-62	229.00
IUUC-Gac-041535	Gasterosteus aculeatus	46.91	1.00e-55	209.00
IUUC-Gma-044113	Glycine max	66.41	1.00e-108	385.00
IUUC-Ggo-044951	Gorilla gorilla	45.13	3.00e-65	240.00
IUUC-Hsa-045737	Homo sapiens	45.45	5.00e-65	240.00
IUUC-Itr-048684	Ictidomys tridecemlineatus	46.32	4.00e-65	240.00
IUUC-Loc-051936	Lepisosteus oculatus	47.93	2.00e-63	235.00
IUUC-Laf-054226	Loxodonta africana	45.91	2.00e-60	225.00
IUUC-Mcc-055281	Macaca mulatta	45.45	5.00e-65	240.00
IUUC-Mmr-060992	Microcebus murinus	46.03	1.00e-61	228.00
IUUC-Mdo-062157	Monodelphis domestica	46.15	7.00e-54	202.00
IUUC-Mmu-063959	Mus musculus	43.96	2.00e-60	224.00
IUUC-Mlu-067798	Myotis lucifugus	42.91	4.00e-53	200.00
IUUC-Nle-069585	Nomascus leucogenys	45.45	5.00e-65	240.00
IUUC-Opr-070267	Ochotona princeps	45.25	3.00e-62	230.00
IUUC-Ont-071374	Oreochromis niloticus	45.23	3.00e-58	217.00
IUUC-Oan-073381	Ornithorhynchus anatinus	44.21	8.00e-57	212.00
IUUC-Ocu-074867	Oryctolagus cuniculus	45.96	8.00e-65	239.00
IUUC-Ola-087568	Oryzias latipes	45.04	2.00e-56	211.00
IUUC-Oga-089082	Otolemur garnettii	44.11	2.00e-59	221.00
IUUC-Ptr-091569	Pan troglodytes	45.45	6.00e-65	239.00
IUUC-Pan-092256	Papio anubis	45.09	4.00e-63	233.00
IUUC-Pma-094483	Petromyzon marinus	46.78	1.00e-53	202.00
IUUC-Pfo-096583	Poecilia formosa	47.11	1.00e-64	239.00
IUUC-Pab-098741	Pongo abelii	45.45	5.00e-65	240.00
IUUC-Pop-099476	Populus trichocarpa	65.41	7.00e-110	389.00
IUUC-Ppe-101925	Prunus persica	70.75	3.00e-111	393.00
IUUC-Pva-102213	Pteropus vampyrus	46.15	1.00e-63	235.00
IUUC-Rno-105229	Rattus norvegicus	45.02	2.00e-64	237.00
IUUC-Sha-106745	Sarcophilus harrisii	44.67	2.00e-53	201.00
IUUC-Sly-110906	Solanum lycopersicum	66.54	5.00e-110	389.00
IUUC-Sar-113709	Sorex araneus	46.51	4.00e-63	233.00
IUUC-Ssc-116428	Sus scrofa	43.91	2.00e-50	191.00
IUUC-Tru-118486	Takifugu rubripes	43.72	2.00e-47	181.00
IUUC-Tsy-118833	Tarsius syrichta	38.17	2.00e-39	154.00
IUUC-Tni-120395	Tetraodon nigroviridis	45.64	8.00e-54	202.00
IUUC-Tca-121639	Theobroma cacao	68.56	6.00e-113	399.00
IUUC-Vpa-130311	Vicugna pacos	46.06	6.00e-56	209.00
IUUC-Vvi-131548	Vitis vinifera	69.20	2.00e-117	414.00
IUUC-Xtr-132909	Xenopus tropicalis	45.64	3.00e-59	220.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence