iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005958

Ensembl Protein ID

fgenesh2_kg.8__427__AT5G43920.1

UniProt Accession

D7MNJ6; D7MNJ6_ARALL

Genbank Protein ID

EFH41655.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_494611

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__427__AT5G43920.1	fgenesh2_kg.8__427__AT5G43920.1	fgenesh2_kg.8__427__AT5G43920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-32	108.4	483	514
UBD/Beta-Prp	2.80e-45	155.5	355	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH+  v+c+++   + ++l+s+sdD ti++W 
   Q: 483  GHSMTVNCVSWnpKNpRMLASASDDQTIRIWG 514
           79999*******84459**************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tg 84
           +++  + +++++pd++ ++t + d+ i++ +++t  +++++   e+++t++++s dgk+++   + + i++wdl    
   Q: 355  TRIPKVVDLAVTPDGESMITVFSDKEIRILNLET--KVERVIPEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAgEW 430
           55556667899***********************..6789*9********************************9677 PP
   S: 85   kcvhtlkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslD 158
           k   +++gh +s + ++++    ++++++sGs+d+ + +w+l++ + le +lsgh+ +vncv+++p++ ++l+s+s+D
   Q: 431  KLPLKFSGHRQSKYVIRSCFgglDSSFIASGSEDSQVYIWNLKNAKPLE-VLSGHSMTVNCVSWNPKNpRMLASASDD 507
           9999*****9998888877777788************************.**************************** PP
   S: 159  rtvrlW 164
           +t+r+W
   Q: 508  QTIRIW 513
           ****** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MENGLWEVLG SKGLLKKHEF IRILVQCLYS LGFKNSASCL EIESNISCKS ADYESLEKRV 60
LSGDWDSCVA VLDRIFDHSK DDTRNTAVYL VFKQCLLEYL KRGDVSLALN VLRKQAPMLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAACGATAG GACTTAACGA TATAATAAAC ACTTTGTTTT CGACCTCTCT TCTCCAAAAA 60
CAACATCGCC GAAATTAATT GAAAATCCGG TGAGACGATT TTGAATTCAC TCCTTCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR023294--Tachylectin2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

aly:ARALYDRAFT_494611

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001381	Ailuropoda melanoleuca	37.88	4.00e-83	301.00
IUUC-Atr-003020	Amborella trichopoda	54.41	1.00e-159	555.00
IUUC-Apl-003200	Anas platyrhynchos	42.02	3.00e-81	295.00
IUUC-Aca-005122	Anolis carolinensis	39.58	9.00e-84	303.00
IUUC-Ath-006873	Arabidopsis thaliana	94.65	0.00e+00	989.00
IUUC-Afu-008972	Aspergillus fumigatus	39.19	2.00e-65	241.00
IUUC-Ame-011448	Astyanax mexicanus	38.58	4.00e-84	305.00
IUUC-Bta-012566	Bos taurus	42.02	8.00e-81	293.00
IUUC-Bdi-014476	Brachypodium distachyon	51.76	6.00e-141	493.00
IUUC-Bol-015916	Brassica oleracea	85.55	0.00e+00	892.00
IUUC-Bra-017911	Brassica rapa	84.48	0.00e+00	896.00
IUUC-Cja-019082	Callithrix jacchus	38.07	2.00e-83	303.00
IUUC-Cfa-020788	Canis familiaris	42.02	7.00e-81	293.00
IUUC-Cpo-022453	Cavia porcellus	42.02	1.00e-80	293.00
IUUC-Cho-024572	Choloepus hoffmanni	40.00	6.00e-58	218.00
IUUC-Cin-025474	Ciona intestinalis	42.20	7.00e-55	206.00
IUUC-Dno-029089	Dasypus novemcinctus	37.36	3.00e-81	295.00
IUUC-Dor-030714	Dipodomys ordii	36.24	2.00e-59	222.00
IUUC-Dme-032077	Drosophila melanogaster	36.54	2.00e-82	299.00
IUUC-Eca-033943	Equus caballus	42.02	8.00e-81	293.00
IUUC-Eeu-034468	Erinaceus europaeus	52.03	2.00e-34	139.00
IUUC-Fca-036556	Felis catus	41.67	1.00e-76	280.00
IUUC-Fal-036639	Ficedula albicollis	37.11	1.00e-82	300.00
IUUC-Gmo-039395	Gadus morhua	41.44	1.00e-78	286.00
IUUC-Gga-040577	Gallus gallus	38.30	2.00e-85	309.00
IUUC-Gac-041352	Gasterosteus aculeatus	37.05	3.00e-82	298.00
IUUC-Gma-043704	Glycine max	65.52	0.00e+00	660.00
IUUC-Ggo-044684	Gorilla gorilla	38.07	2.00e-83	303.00
IUUC-Hsa-046838	Homo sapiens	38.07	2.00e-83	303.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	38.07	1.00e-83	303.00
IUUC-Lch-049848	Latimeria chalumnae	39.26	8.00e-71	260.00
IUUC-Lpe-050773	Leersia perrieri	49.22	2.00e-127	449.00
IUUC-Laf-054153	Loxodonta africana	38.20	2.00e-83	302.00
IUUC-Mcc-054742	Macaca mulatta	38.07	2.00e-83	303.00
IUUC-Mtr-058724	Medicago truncatula	64.73	0.00e+00	695.00
IUUC-Mga-059811	Meleagris gallopavo	39.95	7.00e-68	250.00
IUUC-Mmr-060823	Microcebus murinus	38.07	1.00e-83	303.00
IUUC-Mdo-062394	Monodelphis domestica	39.77	5.00e-84	305.00
IUUC-Mmu-063924	Mus musculus	38.39	2.00e-83	302.00
IUUC-Mpu-066858	Mustela putorius furo	36.75	4.00e-81	295.00
IUUC-Mlu-067659	Myotis lucifugus	38.07	2.00e-83	302.00
IUUC-Nle-069654	Nomascus leucogenys	42.02	7.00e-81	293.00
IUUC-Ont-071547	Oreochromis niloticus	38.77	3.00e-83	302.00
IUUC-Ocu-073812	Oryctolagus cuniculus	37.69	8.00e-81	293.00
IUUC-Obr-076019	Oryza brachyantha	49.80	2.00e-130	458.00
IUUC-Ola-086670	Oryzias latipes	37.34	2.00e-84	306.00
IUUC-Oga-088723	Otolemur garnettii	35.82	2.00e-75	276.00
IUUC-Oar-090125	Ovis aries	38.07	1.00e-83	303.00
IUUC-Ptr-090787	Pan troglodytes	42.02	7.00e-81	293.00
IUUC-Psi-093579	Pelodiscus sinensis	42.25	2.00e-81	295.00
IUUC-Pma-094254	Petromyzon marinus	43.05	1.00e-81	295.00
IUUC-Pfo-096394	Poecilia formosa	38.96	2.00e-84	306.00
IUUC-Pab-098459	Pongo abelii	37.88	2.00e-81	296.00
IUUC-Pop-098968	Populus trichocarpa	72.30	4.00e-159	553.00
IUUC-Pca-100574	Procavia capensis	42.47	2.00e-44	173.00
IUUC-Ppe-101881	Prunus persica	67.97	0.00e+00	713.00
IUUC-Pva-102404	Pteropus vampyrus	39.06	3.00e-69	255.00
IUUC-Pgr-103411	Puccinia graminis	44.44	6.00e-29	122.00
IUUC-Rno-105335	Rattus norvegicus	41.78	6.00e-81	294.00
IUUC-Sha-106497	Sarcophilus harrisii	42.02	3.00e-81	295.00
IUUC-Stu-112587	Solanum tuberosum	59.95	2.00e-152	531.00
IUUC-Sar-113539	Sorex araneus	45.14	1.00e-40	160.00
IUUC-Sre-115051	Sporisorium reilianum	25.88	1.00e-48	187.00
IUUC-Ssc-115532	Sus scrofa	38.58	2.00e-83	303.00
IUUC-Tgu-116728	Taeniopygia guttata	37.50	4.00e-85	308.00
IUUC-Tru-118358	Takifugu rubripes	36.80	1.00e-79	290.00
IUUC-Tsy-119284	Tarsius syrichta	37.32	1.00e-64	239.00
IUUC-Tvi-122376	Trichoderma virens	36.39	1.00e-52	199.00
IUUC-Tae-125733	Triticum aestivum	50.89	2.00e-139	488.00
IUUC-Tbe-128063	Tupaia belangeri	27.49	6.00e-25	107.00
IUUC-Ttr-129184	Tursiops truncatus	41.08	2.00e-76	278.00
IUUC-Vpa-130400	Vicugna pacos	42.02	6.00e-80	290.00
IUUC-Vvi-131027	Vitis vinifera	64.29	0.00e+00	702.00
IUUC-Xtr-132619	Xenopus tropicalis	36.53	1.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence