iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-134063

Ensembl Protein ID

ENSXMAP00000005091.1

UniProt Accession

M3ZS98; M3ZS98_XIPMA

Genbank Protein ID

ENSXMAP00000005091

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01040547

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000005082.1	ENSXMAT00000005096.1	ENSXMAP00000005091.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-21	75.3	228	257
UBD/Beta-Prp	6.90e-43	146.9	239	458

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           H +++++l f  +  +++G++Dg i++WD+ 
   Q: 228  HGAGIFSL-FsCEEGFATGGRDGCIRLWDVN 257
           89999999.9533558*************85 PP

UBD/Beta-Prp

   S: 22   ksllatgsrdgtikvwdvttgkl....lrslsgheae.....vtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghed.svls 99
           ++ +atg+rdg+i++wdv  + +    l    + e++     +++v++  d+  ++ g +D ++  v   +  k++ +++gh++ ++++
   Q: 239  EEGFATGGRDGCIRLWDVNFKPVtkidL---REAEQGykglsIRSVCWRADR--ILAGTQDsEIFEVMVRERDKPLLIMQGHSEgELWA 322
           5679*************98755533332...44444466688*********5..67777776899999999***********7549*** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           l+++p++   v+Gs+dr +r+w l     +     + +++v++v+++ dg+ l+ G++D+   + +++ ++ + + +   ++ ++ ++f
   Q: 323  LDVHPKKPLAVTGSDDRSVRLWSLVDHALIA--RCNMEEAVRSVAFSLDGSQLALGMKDGSFTVLRVRDMTEVVHIKD-RKEVIHEMKF 408
           **********************999999997..6666778****************************9999999997.********** PP
   S: 189  dsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderl 237
           +++g +l+ gs+dg v ++ +  + + v ++   t++++ ++ + ++++l
   Q: 409  SPDGAYLAVGSNDGLVDVYAVAqRYKKVGECSKSTSFITHLDWTVDGKIL 458
           ********************987788899999999999999888887776 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

LRLDWVYGYR GHQCRNNLFY TAGKELVYFV AGVGVVYNSR EHSQRFYLGH SDDIISLFVS 60
LHRFYSLAEG QRSGHQDSSS VSPVGGSDPK PEETALVPTQ QNLTPVSVSL QRLVSVGLDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGACTGG ACTGGGTCTA CGGGTACCGG GGCCACCAGT GCCGGAACAA CCTGTTCTAC 60
ACGGCCGGGA AGGAGCTGGT CTACTTCGTG GCCGGAGTGG GCGTGGTCTA CAACAGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence