iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133072

Ensembl Protein ID

ENSXMAP00000005394.1

UniProt Accession

M3ZT51; M3ZT51_XIPMA

Genbank Protein ID

ENSXMAP00000005394

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01003192

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000005363.1	ENSXMAT00000005400.1	ENSXMAP00000005394.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-46	152.6	1855	1890
UBD/Beta-Prp	1.10e-72	244.8	1415	1654

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H d++t++a+ + +  +s+s+Dg +  WDl +g  lk
   Q: 1855 HRDWITGCAWtP-DCAISSSNDGRLCFWDLESGSHLK 1890
           **********77.668999***********9998765 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           + +s  tcv  spdk+l+++g  +gt+   +++tg+ ++sl +  ++v+++ f +d+  lv++s D+ + vwd+++g+ +  + gh+
   Q: 1415 TFSSEPTCVVLSPDKQLVVVGTGQGTLHFVNAQTGQEVKSLVSSCDGVSSCVFLNDA-QLVSTSFDGRLEVWDVQNGCRTALIDGHT 1500
           5567889999*******************************99999**********9.7**************************** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           +++++ ++ p++++l++ s d t++vw   +  ++   ls  ++  ncv+++p+g ll++G+ D+ v +W+  ++k+ + l g h++
   Q: 1501 NTITASDITPDRKHLATVSLDLTLKVWSSAKANEVA-SLS-STSPFNCVTFDPEGHLLAAGCWDGNVTVWNWLQNKIETSLCG-HQR 1584
           ***************************999999998.554.55689***********************************99.*** PP
   S: 182  svyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           sv+sl f++++   l sg   g+v+lw+++t++cv  +++h+     ++f++++  l+s++sD  + +W 
   Q: 1585 SVRSLCFSPSSsSMLCSGCVSGQVRLWSVSTSTCVGVFQAHSGAAETLAFLEDGAMLLSAGSDHNLHLWS 1654
           *********99667789999*************************************************4 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

NSEDSVWTKI TALAKDVSDR DPEFLLKVAV YTRQELNIRI TTNFLLALAA NLDPTKPHVR 60
RYFCAAVQLP SDWLEIVRIY STPPFLHFYL NKLITLFQCF SQCLPTCLKK AMVDKFKQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTCGGAGG ACAGCGTTTG GACCAAAATC ACTGCACTGG CCAAGGACGT TTCTGATCGG 60
GACCCGGAGT TCCTTCTTAA GGTCGGCCTT TGTACAGTTT GCTGAGTATA TAACCCGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025139--DUF4062
IPR027417--P-loop_NTPase
IPR011044--Quino_amine_DH_bsu
IPR008858--TROVE_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50988--TROVE
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13271--DUF4062
PF05731--TROVE
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001482	Ailuropoda melanoleuca	34.18	0.00e+00	725.00
IUUC-Aca-005102	Anolis carolinensis	44.14	1.00e-96	349.00
IUUC-Ame-011165	Astyanax mexicanus	48.58	0.00e+00	1444.00
IUUC-Bta-012323	Bos taurus	35.74	0.00e+00	783.00
IUUC-Cja-019005	Callithrix jacchus	35.16	0.00e+00	1082.00
IUUC-Cfa-020803	Canis familiaris	34.82	0.00e+00	922.00
IUUC-Cpo-022312	Cavia porcellus	35.15	0.00e+00	773.00
IUUC-Csa-023287	Chlorocebus sabaeus	35.21	0.00e+00	1051.00
IUUC-Dre-028825	Danio rerio	54.55	0.00e+00	1474.00
IUUC-Dno-029455	Dasypus novemcinctus	33.12	0.00e+00	664.00
IUUC-Dor-030328	Dipodomys ordii	34.40	3.00e-101	364.00
IUUC-Ete-032385	Echinops telfairi	36.38	7.00e-109	390.00
IUUC-Eca-033726	Equus caballus	35.17	0.00e+00	759.00
IUUC-Eeu-034665	Erinaceus europaeus	37.01	6.00e-86	313.00
IUUC-Fca-035365	Felis catus	34.68	3.00e-119	424.00
IUUC-Gmo-039584	Gadus morhua	55.57	0.00e+00	1063.00
IUUC-Gac-042307	Gasterosteus aculeatus	61.67	0.00e+00	2170.00
IUUC-Ggo-045432	Gorilla gorilla	33.69	0.00e+00	988.00
IUUC-Hsa-046182	Homo sapiens	35.02	0.00e+00	1058.00
IUUC-Itr-049021	Ictidomys tridecemlineatus	35.08	0.00e+00	776.00
IUUC-Lch-050186	Latimeria chalumnae	35.29	5.00e-75	275.00
IUUC-Laf-054524	Loxodonta africana	35.22	0.00e+00	826.00
IUUC-Mcc-055628	Macaca mulatta	34.92	0.00e+00	1055.00
IUUC-Meu-056338	Macropus eugenii	35.70	2.00e-97	351.00
IUUC-Mmr-060854	Microcebus murinus	35.09	0.00e+00	784.00
IUUC-Mdo-062247	Monodelphis domestica	38.86	2.00e-73	272.00
IUUC-Mmu-064406	Mus musculus	34.87	0.00e+00	736.00
IUUC-Mpu-065806	Mustela putorius furo	34.68	0.00e+00	1028.00
IUUC-Mlu-068116	Myotis lucifugus	35.64	6.00e-116	413.00
IUUC-Nle-069628	Nomascus leucogenys	34.97	0.00e+00	1031.00
IUUC-Opr-070242	Ochotona princeps	34.53	0.00e+00	729.00
IUUC-Oan-073598	Ornithorhynchus anatinus	35.40	2.00e-94	341.00
IUUC-Ocu-073933	Oryctolagus cuniculus	35.86	0.00e+00	1056.00
IUUC-Ola-086886	Oryzias latipes	64.56	0.00e+00	2331.00
IUUC-Oga-088609	Otolemur garnettii	35.60	0.00e+00	789.00
IUUC-Oar-089957	Ovis aries	35.52	0.00e+00	744.00
IUUC-Ptr-090577	Pan troglodytes	34.68	0.00e+00	1032.00
IUUC-Pan-092397	Papio anubis	34.93	0.00e+00	1051.00
IUUC-Pma-094373	Petromyzon marinus	29.56	3.00e-57	216.00
IUUC-Pfo-096497	Poecilia formosa	89.91	0.00e+00	2538.00
IUUC-Pab-098028	Pongo abelii	35.59	0.00e+00	1058.00
IUUC-Pca-101002	Procavia capensis	34.91	6.00e-178	619.00
IUUC-Pva-102144	Pteropus vampyrus	39.81	7.00e-82	300.00
IUUC-Rno-105828	Rattus norvegicus	36.24	8.00e-118	419.00
IUUC-Sha-106469	Sarcophilus harrisii	34.84	0.00e+00	758.00
IUUC-Sar-113035	Sorex araneus	31.93	1.00e-122	436.00
IUUC-Ssc-116122	Sus scrofa	35.13	0.00e+00	731.00
IUUC-Tru-118412	Takifugu rubripes	63.43	0.00e+00	1818.00
IUUC-Tsy-119257	Tarsius syrichta	32.66	2.00e-79	291.00
IUUC-Tni-120032	Tetraodon nigroviridis	62.42	5.00e-101	360.00
IUUC-Tbe-127312	Tupaia belangeri	40.82	2.00e-70	262.00
IUUC-Ttr-128335	Tursiops truncatus	35.75	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence