iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCled  +g    +++ C H+fh dC+  w       +k+ +CPlCr
   Q: 70   CTICLEDAAEGekmRRITACSHCFHVDCIDPW------LMKKSTCPLCR 112
           ********55433356899*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MFIETVIRFS QIIAESVIIA SVVVLTLRLF FRFACFLASR SWRRYRTFTV QHRRRWRKTA 60
AEEKHSSPYC TICLEDAAEG EKMRRITACS HCFHVDCIDP WLMKKSTCPL CRAEIPPVPP 120

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Nucleotide Sequence
(Fasta)

TGTTACTTGT GCCATAGTCT CCAAACATTT TCTCGAGAAT GTTTATTGAA ACTGTGATTA 60
GATTCTCTCA GATCATCGCC GAATCCGTCA TCATCGCCTC CGTCGTCGTC TTGACTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G44578

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003222	Anas platyrhynchos	42.86	1.00e-12	67.80
IUUC-Aly-006256	Arabidopsis lyrata	88.97	1.00e-63	234.00
IUUC-Bol-015924	Brassica oleracea	70.00	5.00e-42	162.00
IUUC-Bra-017160	Brassica rapa	67.86	6.00e-42	162.00
IUUC-Cfa-021169	Canis familiaris	38.83	3.00e-12	67.00
IUUC-Cpo-022010	Cavia porcellus	35.92	6.00e-12	65.50
IUUC-Csa-023712	Chlorocebus sabaeus	35.92	4.00e-12	66.20
IUUC-Cin-025569	Ciona intestinalis	43.02	4.00e-13	69.30
IUUC-Cme-027122	Cyanidioschyzon merolae	51.85	2.00e-13	70.10
IUUC-Ete-033153	Echinops telfairi	37.86	8.00e-12	65.50
IUUC-Ggo-045644	Gorilla gorilla	36.89	1.00e-12	68.20
IUUC-Hsa-045983	Homo sapiens	37.86	1.00e-12	68.20
IUUC-Laf-054039	Loxodonta africana	37.86	3.00e-12	67.00
IUUC-Mcc-054760	Macaca mulatta	36.89	4.00e-12	66.20
IUUC-Mmu-063835	Mus musculus	35.92	1.00e-11	64.30
IUUC-Mpu-066916	Mustela putorius furo	38.83	4.00e-12	66.20
IUUC-Nle-069493	Nomascus leucogenys	37.86	4.00e-13	69.30
IUUC-Oan-073037	Ornithorhynchus anatinus	37.50	1.00e-11	63.90
IUUC-Ptr-090726	Pan troglodytes	37.86	1.00e-12	67.80
IUUC-Pan-091958	Papio anubis	36.89	3.00e-12	66.60
IUUC-Pfo-096209	Poecilia formosa	38.83	8.00e-13	68.20
IUUC-Pab-097950	Pongo abelii	37.86	6.00e-13	68.20
IUUC-Pca-100229	Procavia capensis	36.89	9.00e-12	65.10
IUUC-Tni-120241	Tetraodon nigroviridis	48.44	5.00e-12	65.10
IUUC-Tca-121798	Theobroma cacao	57.14	1.00e-16	78.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence