iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tni-120571

UUCD1 version

UUC-TeN-00510

Ensembl Protein ID

ENSTNIP00000019757.1

UniProt Accession

H3DGW3; H3DGW3_TETNG

Protein Name

Uncharacterized protein

Gene Name

STRN (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000016650.1	ENSTNIT00000019987.1	ENSTNIP00000019757.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	88.8	572	602
UBD/Beta-Prp	1.70e-45	155.7	463	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+dsv++l + s   +l+s+s Dgt+++WD
   Q: 572  GHSDSVWGLVYsSAhQRLLSCSADGTVRLWD 602
           8********99743689************** PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++++a++f+p +++lvt+seD+t+k w+l+           + ++++t+++h   vls+ +s sg+   sG+ d ti++w+++
   Q: 463  TLRSHFDGIRALTFHPVEPVLVTASEDHTLKMWNLQktapakksaslDVEPIYTFRAHRGAVLSVVMSSSGEQCFSGGVDGTIQCWNTP 551
           7899*********************************************************************************9988 PP
   S: 125  tgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvysls..fdsngkelvsgsl 200
           +                 l gh+++v+++v+++  + l s+s+D+tvrlWd +t +  l  + ++++  v s    + s+  +lv+  +
   Q: 552  NPNIDPYdsyepsvlrgALCGHSDSVWGLVYSSAHQRLLSCSADGTVRLWDANTTSpALAVFNEDKKLGVPSSVdlVCSDPAHLVASFT 640
           86554445688999999****************99*****************665526788877666666665568666669******* PP
   S: 201  dgtvklwdlqtgecvrtl 218
           +g++ l++++t + v tl
   Q: 641  NGQIGLFNMETRQLVLTL 658
           **********99988776 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLP GGGKGPLADG DAGEAARAHY SIPGILHFLQ HEWARFEVER 60
AQWEVERAEL QAQIAFLQGE RKGQENLKKD LVRRIKMLEY ALKQESSRAK YHKLKYGTEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAAC AGGCGGGCCC CGGCGTGTTC TTCAATAACA ATAACAACTC GGTTTTACCT 60
GGCGGTGGGA AAGGACCGCT AGCCGATGGC GACGCTGGGG AGGCGGCTAG GGCTCATTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	74.03	0.00e+00	1042.00
IUUC-Apl-003927	Anas platyrhynchos	73.74	0.00e+00	922.00
IUUC-Aca-004933	Anolis carolinensis	69.15	0.00e+00	960.00
IUUC-Ame-011605	Astyanax mexicanus	77.75	0.00e+00	1116.00
IUUC-Bta-013077	Bos taurus	72.85	0.00e+00	1041.00
IUUC-Cel-018443	Caenorhabditis elegans	48.66	3.00e-101	362.00
IUUC-Cja-018973	Callithrix jacchus	72.47	0.00e+00	1037.00
IUUC-Cfa-020988	Canis familiaris	69.79	0.00e+00	915.00
IUUC-Cpo-022496	Cavia porcellus	72.35	0.00e+00	1036.00
IUUC-Csa-023829	Chlorocebus sabaeus	72.42	0.00e+00	1035.00
IUUC-Cho-024338	Choloepus hoffmanni	58.22	0.00e+00	740.00
IUUC-Cin-025167	Ciona intestinalis	45.13	1.00e-175	609.00
IUUC-Csv-026143	Ciona savignyi	56.47	3.00e-129	455.00
IUUC-Dre-028560	Danio rerio	73.45	0.00e+00	1003.00
IUUC-Dno-029742	Dasypus novemcinctus	68.94	0.00e+00	1006.00
IUUC-Dor-030721	Dipodomys ordii	67.21	0.00e+00	945.00
IUUC-Dme-032158	Drosophila melanogaster	61.33	2.00e-134	473.00
IUUC-Eca-033760	Equus caballus	73.01	0.00e+00	958.00
IUUC-Eeu-034953	Erinaceus europaeus	79.95	0.00e+00	638.00
IUUC-Fca-036530	Felis catus	73.29	0.00e+00	975.00
IUUC-Fal-037353	Ficedula albicollis	68.08	0.00e+00	736.00
IUUC-Gmo-039094	Gadus morhua	84.27	0.00e+00	803.00
IUUC-Gga-040132	Gallus gallus	74.53	0.00e+00	940.00
IUUC-Gac-041713	Gasterosteus aculeatus	89.75	0.00e+00	1269.00
IUUC-Ggo-045455	Gorilla gorilla	65.27	0.00e+00	890.00
IUUC-Hsa-046415	Homo sapiens	72.35	0.00e+00	1035.00
IUUC-Itr-048177	Ictidomys tridecemlineatus	65.23	0.00e+00	634.00
IUUC-Lch-050475	Latimeria chalumnae	74.62	0.00e+00	1082.00
IUUC-Loc-051859	Lepisosteus oculatus	80.69	0.00e+00	1134.00
IUUC-Laf-053537	Loxodonta africana	72.85	0.00e+00	1054.00
IUUC-Mcc-055817	Macaca mulatta	74.30	0.00e+00	1034.00
IUUC-Meu-055946	Macropus eugenii	57.22	2.00e-158	552.00
IUUC-Mga-059694	Meleagris gallopavo	74.58	0.00e+00	921.00
IUUC-Mmr-060768	Microcebus murinus	72.92	0.00e+00	1045.00
IUUC-Mdo-061901	Monodelphis domestica	67.35	0.00e+00	1015.00
IUUC-Mmu-064154	Mus musculus	71.97	0.00e+00	1030.00
IUUC-Mpu-065827	Mustela putorius furo	67.60	0.00e+00	1030.00
IUUC-Mlu-067102	Myotis lucifugus	74.03	0.00e+00	1030.00
IUUC-Nle-070008	Nomascus leucogenys	73.57	0.00e+00	967.00
IUUC-Ont-072025	Oreochromis niloticus	90.19	0.00e+00	1276.00
IUUC-Oan-072950	Ornithorhynchus anatinus	74.19	0.00e+00	921.00
IUUC-Ocu-074316	Oryctolagus cuniculus	73.01	0.00e+00	948.00
IUUC-Ola-087279	Oryzias latipes	83.48	0.00e+00	1163.00
IUUC-Oga-088284	Otolemur garnettii	72.35	0.00e+00	1048.00
IUUC-Oar-090304	Ovis aries	72.60	0.00e+00	1037.00
IUUC-Ptr-091052	Pan troglodytes	72.47	0.00e+00	1036.00
IUUC-Pan-092270	Papio anubis	70.63	0.00e+00	1006.00
IUUC-Psi-093907	Pelodiscus sinensis	72.71	0.00e+00	848.00
IUUC-Pma-094286	Petromyzon marinus	65.60	0.00e+00	634.00
IUUC-Pfo-097042	Poecilia formosa	87.67	0.00e+00	1362.00
IUUC-Pab-098110	Pongo abelii	72.47	0.00e+00	1036.00
IUUC-Pca-100266	Procavia capensis	62.19	0.00e+00	714.00
IUUC-Pva-102824	Pteropus vampyrus	71.46	0.00e+00	1011.00
IUUC-Pgr-103483	Puccinia graminis	36.13	8.00e-53	202.00
IUUC-Rno-105638	Rattus norvegicus	71.46	0.00e+00	1039.00
IUUC-Sha-107004	Sarcophilus harrisii	68.15	0.00e+00	868.00
IUUC-Ssc-115280	Sus scrofa	72.36	0.00e+00	1043.00
IUUC-Tgu-116759	Taeniopygia guttata	74.02	0.00e+00	934.00
IUUC-Tru-117944	Takifugu rubripes	95.92	0.00e+00	1360.00
IUUC-Tsy-119405	Tarsius syrichta	64.43	0.00e+00	788.00
IUUC-Tbe-127691	Tupaia belangeri	53.71	2.00e-144	506.00
IUUC-Ttr-128600	Tursiops truncatus	58.56	0.00e+00	797.00
IUUC-Vpa-130294	Vicugna pacos	73.39	0.00e+00	955.00
IUUC-Xtr-132330	Xenopus tropicalis	59.97	0.00e+00	904.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence