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Tag Content
UUCD2 ID IUUC-Cre-022594
UUCD1 version UUC-ChR-00204
Ensembl Protein ID EDP04277
UniProt Accession A8IT87; A8IT87_CHLRE
Genbank Protein ID EDP04277.1
Protein Name Nuclear pre-mRNA splicing factor, component of the spliceosome
Genbank Nucleotide ID DS496122
Gene Name PRP17; CHLREDRAFT_115829
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
CHLREDRAFT_115829 EDP04277 EDP04277
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.60e-22 75.7 40 72
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt +v++++f   +++ll+s++ Dg++k+WD+
   Q: 40   GHTKGVNAVRFfpgTGHLLLSAGMDGKVKIWDV 72
           8*********996433899*************7 PP
   
Organism Chlamydomonas reinhardtii
Protein Sequence
(Fasta)
FHAKEEKDYQ GRSWILPPRD KKNESDSCFL PKRWVHTWAG HTKGVNAVRF FPGTGHLLLS 60
AGMDGKVKIW DVYGSGNNMG VRDVCFSNDG RRFLSTGYDK NIRLWDTETG QCIKSFNTGK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cre-022594|E3,WD_repeat|Chlamydomonas reinhardtii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTCCACGCCA AGGAGGAGAA GGACTACCAG GGCAGGTGCG TGCGTGTGTT TTGTTTTTAA 60
TAAGCACAAG GAAAACAAAT ATATGCGATG CAGCAACGCG TGTGTGTGCG TGTGTTGCGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cre-022594|E3,WD_repeat|Chlamydomonas reinhardtii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome
KEGG cre:CHLREDRAFT_115829
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000473 Aegilops tauschii 48.51 4.00e-87 313.00
IUUC-Aml-002243 Ailuropoda melanoleuca 51.19 4.00e-48 183.00
IUUC-Atr-002502 Amborella trichopoda 48.66 3.00e-90 324.00
IUUC-Apl-003885 Anas platyrhynchos 44.64 2.00e-78 284.00
IUUC-Aca-004854 Anolis carolinensis 36.15 8.00e-53 199.00
IUUC-Aly-006158 Arabidopsis lyrata 51.34 5.00e-95 340.00
IUUC-Ath-007474 Arabidopsis thaliana 51.93 7.00e-95 339.00
IUUC-Ago-007726 Ashbya gossypii 30.55 1.00e-39 155.00
IUUC-Acl-008220 Aspergillus clavatus 35.98 6.00e-58 216.00
IUUC-Afl-008473 Aspergillus flavus 36.26 5.00e-59 220.00
IUUC-Afu-008773 Aspergillus fumigatus 35.75 6.00e-60 223.00
IUUC-Ani-009323 Aspergillus nidulans 37.25 3.00e-51 194.00
IUUC-Ang-009851 Aspergillus niger 35.47 6.00e-59 219.00
IUUC-Aor-009950 Aspergillus oryzae 36.26 5.00e-59 220.00
IUUC-Ate-010372 Aspergillus terreus 36.93 1.00e-59 222.00
IUUC-Ame-011660 Astyanax mexicanus 43.60 1.00e-76 279.00
IUUC-Bgr-012230 Blumeria graminis 37.10 4.00e-60 223.00
IUUC-Bta-012568 Bos taurus 44.61 1.00e-76 278.00
IUUC-Bci-013646 Botrytis cinerea 38.02 4.00e-59 220.00
IUUC-Bdi-014199 Brachypodium distachyon 48.07 9.00e-87 312.00
IUUC-Bol-015695 Brassica oleracea 50.15 2.00e-93 334.00
IUUC-Bra-017923 Brassica rapa 50.00 9.00e-93 332.00
IUUC-Cel-018535 Caenorhabditis elegans 38.78 4.00e-71 260.00
IUUC-Cja-019071 Callithrix jacchus 44.61 1.00e-76 278.00
IUUC-Cfa-020559 Canis familiaris 44.61 2.00e-76 278.00
IUUC-Cpo-022356 Cavia porcellus 44.31 3.00e-76 277.00
IUUC-Csa-023125 Chlorocebus sabaeus 44.61 1.00e-76 278.00
IUUC-Cho-024676 Choloepus hoffmanni 44.31 5.00e-76 276.00
IUUC-Cin-025229 Ciona intestinalis 40.70 2.00e-71 261.00
IUUC-Csv-025868 Ciona savignyi 55.43 2.00e-27 112.00
IUUC-Cgl-026739 Colletotrichum gloeosporioides 32.36 5.00e-47 180.00
IUUC-Cne-026885 Cryptococcus neoformans 41.69 9.00e-73 266.00
IUUC-Dre-027631 Danio rerio 44.02 8.00e-76 276.00
IUUC-Dno-029815 Dasypus novemcinctus 44.31 6.00e-74 270.00
IUUC-Dor-030978 Dipodomys ordii 43.27 3.00e-73 267.00
IUUC-Dse-031520 Dothistroma septosporum 34.17 5.00e-53 200.00
IUUC-Dme-032050 Drosophila melanogaster 38.89 1.00e-67 249.00
IUUC-Ete-032866 Echinops telfairi 42.86 9.00e-72 262.00
IUUC-Eca-033384 Equus caballus 44.31 3.00e-75 274.00
IUUC-Eeu-034471 Erinaceus europaeus 35.38 4.00e-46 177.00
IUUC-Fca-035727 Felis catus 44.61 1.00e-76 278.00
IUUC-Fal-036774 Ficedula albicollis 44.06 1.00e-77 281.00
IUUC-Fox-037951 Fusarium oxysporum 36.44 4.00e-61 227.00
IUUC-Fso-038287 Fusarium solani 37.03 5.00e-61 226.00
IUUC-Gmo-039670 Gadus morhua 44.61 6.00e-79 286.00
IUUC-Ggr-039764 Gaeumannomyces graminis 34.40 1.00e-55 208.00
IUUC-Gga-040293 Gallus gallus 45.48 1.00e-78 285.00
IUUC-Gac-042159 Gasterosteus aculeatus 44.02 2.00e-77 281.00
IUUC-Gma-044299 Glycine max 51.04 2.00e-93 334.00
IUUC-Ggo-044864 Gorilla gorilla 44.61 1.00e-76 279.00
IUUC-Hsa-046602 Homo sapiens 44.61 1.00e-76 279.00
IUUC-Hvu-047431 Hordeum vulgare 25.32 1.00e-22 98.60
IUUC-Itr-047985 Ictidomys tridecemlineatus 44.61 4.00e-76 276.00
IUUC-Kpa-049318 Komagataella pastoris 31.60 8.00e-46 176.00
IUUC-Lch-049796 Latimeria chalumnae 38.60 3.00e-62 231.00
IUUC-Lpe-051153 Leersia perrieri 48.81 1.00e-87 315.00
IUUC-Loc-052467 Lepisosteus oculatus 43.44 2.00e-75 275.00
IUUC-Lma-053107 Leptosphaeria maculans 35.92 3.00e-57 214.00
IUUC-Laf-053787 Loxodonta africana 44.31 7.00e-76 276.00
IUUC-Mcc-055706 Macaca mulatta 44.61 1.00e-76 278.00
IUUC-Meu-056757 Macropus eugenii 43.20 2.00e-67 248.00
IUUC-Mor-057079 Magnaporthe oryzae 34.69 5.00e-56 210.00
IUUC-Mpo-057533 Magnaporthe poae 34.40 8.00e-55 206.00
IUUC-Mtr-057950 Medicago truncatula 49.70 3.00e-92 330.00
IUUC-Mla-058910 Melampsora laricipopulina 39.34 1.00e-70 258.00
IUUC-Mga-059366 Meleagris gallopavo 45.48 1.00e-78 285.00
IUUC-Mvi-060349 Microbotryum violaceum 36.15 2.00e-58 218.00
IUUC-Mmr-061209 Microcebus murinus 44.61 1.00e-76 278.00
IUUC-Mdo-062118 Monodelphis domestica 44.61 3.00e-76 277.00
IUUC-Mmu-063173 Mus musculus 44.61 1.00e-76 278.00
IUUC-Mac-065080 Musa acuminata 50.15 2.00e-92 331.00
IUUC-Mpu-066659 Mustela putorius furo 44.61 1.00e-76 278.00
IUUC-Mlu-067029 Myotis lucifugus 44.61 1.00e-76 278.00
IUUC-Nfi-068334 Neosartorya fischeri 37.11 5.00e-60 223.00
IUUC-Ncr-068675 Neurospora crassa 32.18 6.00e-47 180.00
IUUC-Nle-070113 Nomascus leucogenys 44.61 9.00e-77 279.00
IUUC-Opr-070685 Ochotona princeps 44.31 3.00e-76 277.00
IUUC-Ont-071680 Oreochromis niloticus 44.31 2.00e-77 281.00
IUUC-Oan-073573 Ornithorhynchus anatinus 42.86 1.00e-68 252.00
IUUC-Ocu-074074 Oryctolagus cuniculus 44.61 1.00e-76 278.00
IUUC-Oba-075625 Oryza barthii 48.51 2.00e-87 314.00
IUUC-Obr-076510 Oryza brachyantha 48.37 8.00e-88 315.00
IUUC-Ogl-077275 Oryza glaberrima 48.51 2.00e-87 314.00
IUUC-Ogu-078563 Oryza glumaepatula 48.51 3.00e-87 314.00
IUUC-Oin-079898 Oryza indica 48.37 2.00e-87 314.00
IUUC-Olo-081080 Oryza longistaminata 48.51 3.00e-87 313.00
IUUC-Oni-083121 Oryza nivara 48.51 2.00e-87 314.00
IUUC-Opu-083329 Oryza punctata 48.51 3.00e-87 314.00
IUUC-Oru-084807 Oryza rufipogon 46.69 3.00e-68 250.00
IUUC-Osa-086039 Oryza sativa 48.66 5.00e-88 316.00
IUUC-Ola-087149 Oryzias latipes 45.19 2.00e-79 288.00
IUUC-Olu-087627 Ostreococcus lucimarinus 43.58 1.00e-71 261.00
IUUC-Oga-088359 Otolemur garnettii 44.61 1.00e-76 278.00
IUUC-Oar-089390 Ovis aries 44.61 2.00e-76 278.00
IUUC-Ptr-090894 Pan troglodytes 44.61 1.00e-76 279.00
IUUC-Pan-092476 Papio anubis 44.61 1.00e-76 278.00
IUUC-Psi-093527 Pelodiscus sinensis 41.67 1.00e-61 229.00
IUUC-Pno-094771 Phaeosphaeria nodorum 35.34 3.00e-56 210.00
IUUC-Ppa-095386 Physcomitrella patens 51.63 1.00e-94 338.00
IUUC-Pfo-096139 Poecilia formosa 43.73 6.00e-77 280.00
IUUC-Pab-097838 Pongo abelii 41.55 1.00e-55 209.00
IUUC-Pop-099962 Populus trichocarpa 51.04 1.00e-94 338.00
IUUC-Pca-100876 Procavia capensis 42.82 6.00e-71 259.00
IUUC-Ppe-101777 Prunus persica 50.45 1.00e-92 332.00
IUUC-Pva-102418 Pteropus vampyrus 44.31 6.00e-76 276.00
IUUC-Pgr-103456 Puccinia graminis 42.27 3.00e-76 277.00
IUUC-Ptt-103731 Puccinia triticina 42.06 3.00e-69 254.00
IUUC-Pte-104386 Pyrenophora teres 34.20 2.00e-53 201.00
IUUC-Pyt-104560 Pyrenophora triticirepentis 34.20 1.00e-53 201.00
IUUC-Rno-105694 Rattus norvegicus 44.61 2.00e-76 278.00
IUUC-Sce-106339 Saccharomyces cerevisiae 29.82 2.00e-41 161.00
IUUC-Sha-106709 Sarcophilus harrisii 44.61 3.00e-76 277.00
IUUC-Sja-107817 Schizosaccharomyces japonicus 35.28 9.00e-60 222.00
IUUC-Spo-108331 Schizosaccharomyces pombe 35.55 8.00e-57 213.00
IUUC-Ssl-108530 Sclerotinia sclerotiorum 38.91 1.00e-51 195.00
IUUC-Smo-109326 Selaginella moellendorffii 43.19 4.00e-72 263.00
IUUC-Sit-110446 Setaria italica 48.96 6.00e-89 319.00
IUUC-Sly-111330 Solanum lycopersicum 51.04 1.00e-92 332.00
IUUC-Stu-112610 Solanum tuberosum 51.04 1.00e-92 332.00
IUUC-Sar-113065 Sorex araneus 44.72 1.00e-26 112.00
IUUC-Sbi-114005 Sorghum bicolor 49.26 4.00e-89 320.00
IUUC-Sre-114988 Sporisorium reilianum 42.27 2.00e-75 275.00
IUUC-Ssc-115760 Sus scrofa 44.61 1.00e-76 278.00
IUUC-Tgu-116493 Taeniopygia guttata 44.61 6.00e-78 283.00
IUUC-Tru-118489 Takifugu rubripes 43.44 7.00e-76 276.00
IUUC-Tsy-119332 Tarsius syrichta 44.61 2.00e-76 278.00
IUUC-Tni-120202 Tetraodon nigroviridis 41.57 1.00e-68 252.00
IUUC-Tca-121429 Theobroma cacao 50.15 1.00e-92 332.00
IUUC-Tre-122162 Trichoderma reesei 37.61 2.00e-61 228.00
IUUC-Tvi-122500 Trichoderma virens 37.90 6.00e-62 229.00
IUUC-Tae-125557 Triticum aestivum 48.37 8.00e-87 312.00
IUUC-Tur-126554 Triticum urartu 48.06 3.00e-85 307.00
IUUC-Tme-126919 Tuber melanosporum 38.12 2.00e-61 228.00
IUUC-Tbe-127968 Tupaia belangeri 42.86 8.00e-73 266.00
IUUC-Ttr-129215 Tursiops truncatus 44.31 2.00e-74 271.00
IUUC-Uma-129622 Ustilago maydis 40.82 3.00e-72 264.00
IUUC-Vda-129750 Verticillium dahliae 36.75 5.00e-60 223.00
IUUC-Vpa-130617 Vicugna pacos 44.61 3.00e-76 277.00
IUUC-Vvi-131238 Vitis vinifera 50.45 6.00e-93 333.00
IUUC-Xtr-131865 Xenopus tropicalis 43.93 4.00e-75 273.00
IUUC-Xma-133627 Xiphophorus maculatus 43.73 2.00e-76 278.00
IUUC-Yli-134390 Yarrowia lipolytica 37.39 3.00e-54 204.00
IUUC-Zma-135925 Zea mays 48.96 3.00e-88 317.00
Created Date 25-Jun-2017

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