iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039764

Ensembl Protein ID

GGTG_00106T0

UniProt Accession

J3NFR2; J3NFR2_GAGT3

Genbank Protein ID

EJT80102.1

Protein Name

Pre-mRNA-processing factor 17

Genbank Nucleotide ID

ADBI01000013

Gene Name

GGTG_00106

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_00106	GGTG_00106T0	GGTG_00106T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-27	92.8	240	271
UBD/Beta-Prp	9.30e-48	162.4	231	444

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           Ht  +t+l+f   s++ll+sGs D t+k+WD+
   Q: 240  HTKAITSLNFfpgSGHLLLSGSADSTVKIWDV 271
           9999*****997555999*************7 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
            k vht+k h++ ++sl+f+p sg+ l+sGs+d+t+++wd+ +  +l  t sgh+++ + v+++  g  + ++s Dr+++lWd +tg+++ ++t g+
   Q: 231  KKLVHTWKHHTKAITSLNFFPgSGHLLLSGSADSTVKIWDVYHSRELLRTYSGHTKSLSDVTFNTHGEKFLTASFDRMMKLWDTETGQCISKFTTGK 327
           689******************999*********************9999********************************************7767 PP
   S: 180  tdsvysls.fdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavls 274
           t+ v   +   + g e+v g  d+++  +d +  +e v+++  h  +v+ + f +++ r++++s+D+++r W +  g ++k ++ +    +  ++ +
   Q: 328  TPHVIRFNpTAELGHEFVVGMSDNKIVQFDTRaGNEPVQEYDHHLGPVNTITFVDDGRRFMTTSDDRTLRAWEYGFGVPIKYIAEPYLFAMTRSATH 424
           66665555355556******************54568*************************************************9555444445* PP
   S: 275  fgdnvlvlgsedskvniwkl 294
           +++++++  s+d+++ +++ 
   Q: 425  PSGKYVAFQSSDNQITVYSS 444
           *****************985 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MSGFSEYAPN MVPTDALVLR TEAEPAHELV QYTGEDLARP RLGPANPFRD DSAPLKRKNV 60
LTGYAQETFV SEHTFRSKHR AVERRGGPER EFQSGADVKA EAAKLRRTRE GKGSALVAEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCGCGCG CCTGGTTTTG GCGTCCATTT TGAGCAACGA GCAACTGCGA CAGCCCGGCC 60
CAAAAGACAC CCGCAAGAGC AACCAAAGCA GCCAGATCTT GTCCCCAGAC CTGCCCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	48.68	6.00e-102	362.00
IUUC-Aml-002243	Ailuropoda melanoleuca	38.81	6.00e-77	279.00
IUUC-Atr-002502	Amborella trichopoda	49.28	2.00e-102	364.00
IUUC-Apl-003885	Anas platyrhynchos	40.56	1.00e-114	404.00
IUUC-Aca-004854	Anolis carolinensis	28.86	6.00e-64	236.00
IUUC-Aly-006158	Arabidopsis lyrata	49.86	2.00e-105	374.00
IUUC-Ath-007474	Arabidopsis thaliana	49.86	3.00e-105	374.00
IUUC-Ago-007726	Ashbya gossypii	37.47	2.00e-75	274.00
IUUC-Acl-008220	Aspergillus clavatus	58.57	2.00e-176	610.00
IUUC-Afl-008473	Aspergillus flavus	57.44	1.00e-170	591.00
IUUC-Afu-008773	Aspergillus fumigatus	57.47	2.00e-174	604.00
IUUC-Ani-009323	Aspergillus nidulans	58.18	1.00e-155	541.00
IUUC-Ang-009851	Aspergillus niger	57.71	3.00e-174	603.00
IUUC-Aor-009950	Aspergillus oryzae	57.44	1.00e-170	591.00
IUUC-Ate-010372	Aspergillus terreus	59.77	2.00e-175	607.00
IUUC-Ame-011660	Astyanax mexicanus	39.03	4.00e-115	407.00
IUUC-Bgr-012230	Blumeria graminis	62.31	0.00e+00	707.00
IUUC-Bta-012568	Bos taurus	39.86	5.00e-113	399.00
IUUC-Bci-013646	Botrytis cinerea	63.04	0.00e+00	678.00
IUUC-Bdi-014199	Brachypodium distachyon	48.83	4.00e-103	367.00
IUUC-Bol-015695	Brassica oleracea	47.84	5.00e-105	373.00
IUUC-Bra-017923	Brassica rapa	47.70	2.00e-104	371.00
IUUC-Cel-018535	Caenorhabditis elegans	37.43	2.00e-93	335.00
IUUC-Cja-019071	Callithrix jacchus	39.49	3.00e-113	400.00
IUUC-Cfa-020559	Canis familiaris	39.86	8.00e-113	399.00
IUUC-Cpo-022356	Cavia porcellus	39.49	2.00e-113	401.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	34.76	3.00e-56	210.00
IUUC-Csa-023125	Chlorocebus sabaeus	39.49	1.00e-113	401.00
IUUC-Cho-024676	Choloepus hoffmanni	43.89	1.00e-109	388.00
IUUC-Cin-025229	Ciona intestinalis	41.79	2.00e-113	401.00
IUUC-Csv-025868	Ciona savignyi	57.30	1.00e-30	122.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	65.73	0.00e+00	696.00
IUUC-Cne-026885	Cryptococcus neoformans	40.72	2.00e-111	395.00
IUUC-Dre-027631	Danio rerio	39.96	3.00e-116	410.00
IUUC-Dno-029815	Dasypus novemcinctus	39.03	3.00e-109	387.00
IUUC-Dor-030978	Dipodomys ordii	47.95	7.00e-101	359.00
IUUC-Dse-031520	Dothistroma septosporum	51.84	2.00e-141	493.00
IUUC-Dme-032050	Drosophila melanogaster	38.08	5.00e-107	379.00
IUUC-Ete-032866	Echinops telfairi	39.23	2.00e-110	390.00
IUUC-Eca-033384	Equus caballus	39.31	2.00e-111	394.00
IUUC-Eeu-034471	Erinaceus europaeus	32.50	6.00e-75	273.00
IUUC-Fca-035727	Felis catus	39.86	5.00e-113	400.00
IUUC-Fal-036774	Ficedula albicollis	40.89	5.00e-115	406.00
IUUC-Fox-037951	Fusarium oxysporum	69.61	0.00e+00	773.00
IUUC-Fso-038287	Fusarium solani	68.48	0.00e+00	753.00
IUUC-Gmo-039670	Gadus morhua	38.34	6.00e-116	409.00
IUUC-Gga-040293	Gallus gallus	40.60	2.00e-115	408.00
IUUC-Gac-042159	Gasterosteus aculeatus	38.96	1.00e-117	415.00
IUUC-Gma-044299	Glycine max	48.54	6.00e-102	363.00
IUUC-Ggo-044864	Gorilla gorilla	39.49	2.00e-113	401.00
IUUC-Hsa-046602	Homo sapiens	39.49	2.00e-113	401.00
IUUC-Hvu-047431	Hordeum vulgare	28.44	2.00e-36	144.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	50.00	5.00e-108	382.00
IUUC-Kpa-049318	Komagataella pastoris	45.48	1.00e-98	351.00
IUUC-Lch-049796	Latimeria chalumnae	42.09	8.00e-95	339.00
IUUC-Lpe-051153	Leersia perrieri	48.97	4.00e-103	367.00
IUUC-Loc-052467	Lepisosteus oculatus	40.62	1.00e-117	415.00
IUUC-Lma-053107	Leptosphaeria maculans	59.92	2.00e-159	553.00
IUUC-Laf-053787	Loxodonta africana	40.33	6.00e-117	412.00
IUUC-Mcc-055706	Macaca mulatta	39.49	2.00e-113	401.00
IUUC-Meu-056757	Macropus eugenii	47.46	3.00e-91	327.00
IUUC-Mor-057079	Magnaporthe oryzae	82.29	0.00e+00	933.00
IUUC-Mpo-057533	Magnaporthe poae	85.37	0.00e+00	887.00
IUUC-Mtr-057950	Medicago truncatula	48.69	1.00e-102	365.00
IUUC-Mla-058910	Melampsora laricipopulina	37.89	1.00e-112	398.00
IUUC-Mga-059366	Meleagris gallopavo	40.60	2.00e-115	407.00
IUUC-Mvi-060349	Microbotryum violaceum	46.28	1.00e-109	388.00
IUUC-Mmr-061209	Microcebus murinus	40.22	7.00e-117	412.00
IUUC-Mdo-062118	Monodelphis domestica	39.71	2.00e-116	411.00
IUUC-Mmu-063173	Mus musculus	39.49	1.00e-113	402.00
IUUC-Mac-065109	Musa acuminata	48.41	2.00e-102	365.00
IUUC-Mpu-066659	Mustela putorius furo	39.86	4.00e-113	400.00
IUUC-Mlu-067029	Myotis lucifugus	39.63	4.00e-113	400.00
IUUC-Nfi-068334	Neosartorya fischeri	58.08	3.00e-175	606.00
IUUC-Ncr-068675	Neurospora crassa	63.90	0.00e+00	687.00
IUUC-Nle-070113	Nomascus leucogenys	39.49	1.00e-113	401.00
IUUC-Opr-070685	Ochotona princeps	49.86	1.00e-110	391.00
IUUC-Ont-071680	Oreochromis niloticus	38.92	6.00e-116	409.00
IUUC-Oan-073573	Ornithorhynchus anatinus	40.64	1.00e-108	384.00
IUUC-Ocu-074074	Oryctolagus cuniculus	40.22	1.00e-116	411.00
IUUC-Oba-075625	Oryza barthii	48.68	7.00e-103	366.00
IUUC-Obr-076510	Oryza brachyantha	48.83	2.00e-103	367.00
IUUC-Ogl-077275	Oryza glaberrima	48.68	7.00e-103	366.00
IUUC-Ogu-078563	Oryza glumaepatula	48.68	7.00e-103	366.00
IUUC-Oin-079898	Oryza indica	48.25	7.00e-102	362.00
IUUC-Olo-081080	Oryza longistaminata	48.68	1.00e-102	365.00
IUUC-Oni-083121	Oryza nivara	48.68	8.00e-103	366.00
IUUC-Opu-083329	Oryza punctata	48.68	9.00e-103	365.00
IUUC-Oru-084807	Oryza rufipogon	49.66	5.00e-89	320.00
IUUC-Osa-086039	Oryza sativa	48.83	2.00e-103	368.00
IUUC-Ola-087149	Oryzias latipes	39.14	1.00e-115	408.00
IUUC-Olu-087627	Ostreococcus lucimarinus	37.09	1.00e-87	315.00
IUUC-Oga-088359	Otolemur garnettii	39.49	2.00e-113	401.00
IUUC-Oar-089390	Ovis aries	39.86	1.00e-112	399.00
IUUC-Ptr-090894	Pan troglodytes	39.49	2.00e-113	401.00
IUUC-Pan-092476	Papio anubis	39.49	2.00e-113	401.00
IUUC-Psi-093527	Pelodiscus sinensis	39.73	7.00e-107	379.00
IUUC-Pno-094771	Phaeosphaeria nodorum	58.82	4.00e-160	556.00
IUUC-Ppa-095386	Physcomitrella patens	49.18	2.00e-105	374.00
IUUC-Pfo-096139	Poecilia formosa	40.00	3.00e-117	414.00
IUUC-Pab-097838	Pongo abelii	39.23	1.00e-97	348.00
IUUC-Pop-099962	Populus trichocarpa	48.99	3.00e-103	367.00
IUUC-Pca-100876	Procavia capensis	41.93	3.00e-87	314.00
IUUC-Ppe-101777	Prunus persica	49.71	3.00e-103	367.00
IUUC-Pva-102418	Pteropus vampyrus	39.86	1.00e-112	398.00
IUUC-Pgr-103456	Puccinia graminis	48.18	1.00e-118	419.00
IUUC-Ptt-103731	Puccinia triticina	38.32	7.00e-115	406.00
IUUC-Pte-104386	Pyrenophora teres	57.14	8.00e-151	525.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	57.77	4.00e-152	529.00
IUUC-Rno-105694	Rattus norvegicus	50.00	5.00e-108	383.00
IUUC-Sce-106339	Saccharomyces cerevisiae	39.39	8.00e-79	286.00
IUUC-Sha-106709	Sarcophilus harrisii	39.82	2.00e-115	407.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	43.00	8.00e-123	432.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.08	5.00e-120	423.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	62.89	0.00e+00	632.00
IUUC-Smo-108778	Selaginella moellendorffii	35.87	2.00e-91	328.00
IUUC-Sit-110446	Setaria italica	49.12	4.00e-103	367.00
IUUC-Sly-111330	Solanum lycopersicum	50.14	5.00e-105	373.00
IUUC-Stu-112610	Solanum tuberosum	50.14	3.00e-105	374.00
IUUC-Sar-113065	Sorex araneus	36.79	4.00e-33	134.00
IUUC-Sbi-114005	Sorghum bicolor	49.57	4.00e-103	367.00
IUUC-Sre-114988	Sporisorium reilianum	40.54	5.00e-121	426.00
IUUC-Ssc-115760	Sus scrofa	39.31	4.00e-113	400.00
IUUC-Tgu-116493	Taeniopygia guttata	40.86	3.00e-116	410.00
IUUC-Tru-118489	Takifugu rubripes	38.43	1.00e-114	405.00
IUUC-Tsy-119332	Tarsius syrichta	40.22	6.00e-117	412.00
IUUC-Tni-120202	Tetraodon nigroviridis	38.18	2.00e-103	368.00
IUUC-Tca-121429	Theobroma cacao	48.85	8.00e-102	362.00
IUUC-Tre-122162	Trichoderma reesei	65.48	0.00e+00	727.00
IUUC-Tvi-122500	Trichoderma virens	65.67	0.00e+00	716.00
IUUC-Tae-125557	Triticum aestivum	48.54	1.00e-101	362.00
IUUC-Tur-126554	Triticum urartu	48.24	7.00e-100	356.00
IUUC-Tme-126919	Tuber melanosporum	55.78	6.00e-173	598.00
IUUC-Tbe-127968	Tupaia belangeri	38.98	3.00e-107	380.00
IUUC-Ttr-129215	Tursiops truncatus	39.67	7.00e-111	392.00
IUUC-Uma-129622	Ustilago maydis	40.21	5.00e-117	413.00
IUUC-Vda-129750	Verticillium dahliae	70.84	0.00e+00	783.00
IUUC-Vpa-130617	Vicugna pacos	40.56	7.00e-114	402.00
IUUC-Vvi-131238	Vitis vinifera	48.70	8.00e-102	362.00
IUUC-Xtr-131865	Xenopus tropicalis	40.75	4.00e-116	410.00
IUUC-Xma-133627	Xiphophorus maculatus	40.18	1.00e-117	415.00
IUUC-Yli-134390	Yarrowia lipolytica	51.35	3.00e-109	387.00
IUUC-Zma-135925	Zea mays	48.48	9.00e-99	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence