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Tag Content
iUUCD ID IUUC-Vda-129837
Ensembl Protein ID EGY20589
UniProt Accession G2XJ86; G2XJ86_VERDV
Genbank Protein ID EGY20589.1
Protein Name Nuclear distribution protein PAC1; Lissencephaly-1 homolog; nudF homolog
Genbank Nucleotide ID DS572727
Gene Name PAC1; LIS1; VDAG_10218
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VDAG_10218 EGY20589 EGY20589
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.00e-52 171.0 199 246
UBD/Beta-Prp 1.70e-64 216.9 111 461
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sd.tllvsGsdDgtikvWDlrtgvllks 38
    gH sv+c++f s+ +llvs+s+D+t+++WD++tg +lk+
   Q: 199 GHDHSVSCVRFipsgaagapSSgNLLVSASRDKTLRIWDVSTGYCLKT 246
    8******************8557********************99875 PP
   


   UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk..ilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfs 103
    + +h +++tcv+f+p s la+gs+d tik+wd++ g l r+++gh+++v +v+f + +l+++s+D tik+wd+s +k ++tl gh++sv +++f
   Q: 111 Q-SHREPVTCVAFHPVFSSLASGSDDYTIKIWDWELGELERTIKGHTNAVLDVDFGGPRGgtLLASCSNDLTIKLWDPSdEYKNIRTLPGHDHSVSCVRFI 210
    4.56669999*********************************************8544446**************887699******************* PP
   S: 104 p........sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsng.. 192
    p sg+ lvs+s+d+t+r+wd++tg+cl+ tl+gh ++v+ v +pdg+ l s s+Dr+ rlWd++ ++ ++l g h++ v + ++ +
   Q: 211 PsgaagapsSGNLLVSASRDKTLRIWDVSTGYCLK-TLRGHADWVRDVYPSPDGRFLLSVSDDRMGRLWDISAATPETKLtlVG-HEHVVLCCALAPATay 309
    99999999888************************.***********************************9999988887355.*********6666666 PP
   S: 193 ...................kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl.rsgdllktlqlhnssvisvavl 273
    +++++g++d+t++lwd +g+c++ l gh+++v+++ f+p +++l+s+s+D ++r+Wdl + g++++t+q+ + +++s+ +
   Q: 310 phlaplaglkkappassgtEFMATGGRDKTIRLWDG-RGNCIKVLVGHDNWVRDLVFHPGGKYLISASDDYTLRCWDLtQEGKCVRTVQGVHGHFVSCLRW 409
    6667777777777777777****************8.899************************************983679********99555554332 PP
   S: 274 sfgdnvl...................................vlgsedskvniw 292
    ++ ++ ++gs d kv+++
   Q: 410 APS--IIredasangsgengangtpsksaaapatteqircviATGSVDMKVRVF 461
    222..2222222333333333444444444444444444443666666666665 PP
   

Organism Verticillium dahliae
Functional Description
(View)

Functional Description



     Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.
Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.
Protein Sequence
(Fasta)
MSQILTPRQA EELHAIIAYL SSSGLPSTAA ALRQELNIGD TFDDATSKKY EGLLEKKWTS 60
VVRLQKKIME LETRVASLQS EIDNATPTSL SRRNQDPSAW LPRAQARHTL QSHREPVTCV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Vda-129837|E3,WD_repeat;UBD,Beta-Prp|Verticillium dahliae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGCCAGA TTTTGACCCC TCGGCAAGCA GAAGAGCTGC ACGTCTCGCC CCTCCGAGCG 60
GTCACCGCCC AAGGATCCCC TTTCGCTGAC CGGTTCCCAG GCACAAGGCC ATCATAGCAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Vda-129837|E3,WD_repeat;UBD,Beta-Prp|Verticillium dahliae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-0498--Mitosis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR017252--Dynein_regulator_LIS1
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0000922--C:spindle pole
GO:0051301--P:cell division
GO:0000132--P:establishment of mitotic spindle orientation
GO:0007067--P:mitotic nuclear division
GO:0006810--P:transport

KEGG vda:VDAG_10218
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001589 Ailuropoda melanoleuca 45.54 1.00e-99 354.00
IUUC-Apl-004024 Anas platyrhynchos 45.69 5.00e-102 362.00
IUUC-Aca-004564 Anolis carolinensis 45.22 1.00e-99 354.00
IUUC-Ago-007862 Ashbya gossypii 29.20 8.00e-32 129.00
IUUC-Acl-008360 Aspergillus clavatus 73.56 0.00e+00 667.00
IUUC-Afl-008502 Aspergillus flavus 61.69 1.00e-162 563.00
IUUC-Afu-008848 Aspergillus fumigatus 73.31 0.00e+00 702.00
IUUC-Ani-009173 Aspergillus nidulans 57.54 2.00e-155 540.00
IUUC-Ang-009873 Aspergillus niger 55.84 2.00e-151 526.00
IUUC-Aor-009973 Aspergillus oryzae 58.71 2.00e-154 536.00
IUUC-Ate-010523 Aspergillus terreus 58.01 2.00e-157 546.00
IUUC-Ame-011154 Astyanax mexicanus 46.39 3.00e-103 366.00
IUUC-Bgr-011972 Blumeria graminis 70.54 0.00e+00 683.00
IUUC-Bta-013106 Bos taurus 45.43 5.00e-102 362.00
IUUC-Bci-013615 Botrytis cinerea 73.08 0.00e+00 678.00
IUUC-Cel-018459 Caenorhabditis elegans 41.98 4.00e-89 319.00
IUUC-Cja-018755 Callithrix jacchus 45.26 1.00e-100 358.00
IUUC-Cfa-020749 Canis familiaris 45.43 5.00e-102 362.00
IUUC-Cpo-022371 Cavia porcellus 45.43 5.00e-102 362.00
IUUC-Csa-023524 Chlorocebus sabaeus 45.43 5.00e-85 305.00
IUUC-Cho-024764 Choloepus hoffmanni 42.67 1.00e-83 301.00
IUUC-Cin-025753 Ciona intestinalis 45.56 6.00e-95 338.00
IUUC-Csv-025817 Ciona savignyi 45.80 6.00e-100 355.00
IUUC-Cgl-026529 Colletotrichum gloeosporioides 83.19 0.00e+00 751.00
IUUC-Cne-027087 Cryptococcus neoformans 52.15 2.00e-112 396.00
IUUC-Dre-028314 Danio rerio 47.06 3.00e-103 366.00
IUUC-Dno-029050 Dasypus novemcinctus 45.43 6.00e-102 362.00
IUUC-Dor-030222 Dipodomys ordii 42.41 7.00e-92 328.00
IUUC-Dse-031164 Dothistroma septosporum 68.09 0.00e+00 644.00
IUUC-Dme-031745 Drosophila melanogaster 44.99 1.00e-90 324.00
IUUC-Ete-032508 Echinops telfairi 46.24 3.00e-68 250.00
IUUC-Eca-034288 Equus caballus 45.05 9.00e-99 351.00
IUUC-Eeu-034984 Erinaceus europaeus 42.17 7.00e-91 325.00
IUUC-Fca-036498 Felis catus 45.43 5.00e-102 362.00
IUUC-Fal-036920 Ficedula albicollis 45.69 5.00e-102 362.00
IUUC-Fox-037996 Fusarium oxysporum 70.04 0.00e+00 684.00
IUUC-Fso-038160 Fusarium solani 68.32 0.00e+00 660.00
IUUC-Gmo-038983 Gadus morhua 46.15 5.00e-104 369.00
IUUC-Ggr-040051 Gaeumannomyces graminis 68.31 0.00e+00 645.00
IUUC-Gga-040623 Gallus gallus 45.69 5.00e-102 362.00
IUUC-Gac-041613 Gasterosteus aculeatus 45.91 6.00e-103 365.00
IUUC-Ggo-045410 Gorilla gorilla 41.15 2.00e-83 300.00
IUUC-Hsa-046358 Homo sapiens 45.69 4.00e-102 362.00
IUUC-Itr-047890 Ictidomys tridecemlineatus 45.43 5.00e-102 362.00
IUUC-Kpa-049351 Komagataella pastoris 29.22 2.00e-44 171.00
IUUC-Lch-049936 Latimeria chalumnae 45.19 5.00e-102 362.00
IUUC-Loc-052476 Lepisosteus oculatus 45.79 1.00e-99 354.00
IUUC-Lma-053170 Leptosphaeria maculans 71.92 0.00e+00 654.00
IUUC-Laf-053713 Loxodonta africana 45.54 3.00e-100 356.00
IUUC-Mcc-054628 Macaca mulatta 45.43 9.00e-102 361.00
IUUC-Meu-055927 Macropus eugenii 37.99 2.00e-48 184.00
IUUC-Mor-056962 Magnaporthe oryzae 69.96 0.00e+00 668.00
IUUC-Mpo-057583 Magnaporthe poae 69.59 0.00e+00 627.00
IUUC-Mla-058819 Melampsora laricipopulina 46.60 1.00e-114 404.00
IUUC-Mga-059945 Meleagris gallopavo 45.45 1.00e-101 361.00
IUUC-Mvi-060403 Microbotryum violaceum 50.96 2.00e-127 447.00
IUUC-Mmr-061289 Microcebus murinus 45.45 5.00e-100 355.00
IUUC-Mdo-061912 Monodelphis domestica 45.19 5.00e-101 358.00
IUUC-Mmu-063253 Mus musculus 45.43 5.00e-102 362.00
IUUC-Mpu-066638 Mustela putorius furo 45.43 5.00e-102 362.00
IUUC-Mlu-067267 Myotis lucifugus 45.54 7.00e-100 355.00
IUUC-Nfi-068571 Neosartorya fischeri 68.51 0.00e+00 640.00
IUUC-Ncr-068895 Neurospora crassa 74.89 0.00e+00 683.00
IUUC-Nle-069087 Nomascus leucogenys 45.04 4.00e-84 302.00
IUUC-Opr-070579 Ochotona princeps 45.43 6.00e-102 362.00
IUUC-Ont-072432 Oreochromis niloticus 45.43 5.00e-102 362.00
IUUC-Oan-073072 Ornithorhynchus anatinus 45.43 5.00e-102 362.00
IUUC-Ocu-074180 Oryctolagus cuniculus 45.43 6.00e-102 362.00
IUUC-Ola-086772 Oryzias latipes 46.15 1.00e-102 364.00
IUUC-Oga-088219 Otolemur garnettii 45.54 6.00e-100 355.00
IUUC-Oar-090394 Ovis aries 45.43 5.00e-102 362.00
IUUC-Ptr-091517 Pan troglodytes 45.43 5.00e-102 362.00
IUUC-Pan-092421 Papio anubis 45.43 9.00e-102 361.00
IUUC-Psi-093370 Pelodiscus sinensis 45.69 1.00e-101 361.00
IUUC-Pma-094319 Petromyzon marinus 45.61 8.00e-85 305.00
IUUC-Pno-094815 Phaeosphaeria nodorum 72.75 0.00e+00 671.00
IUUC-Pfo-097089 Poecilia formosa 46.88 1.00e-104 370.00
IUUC-Pab-098421 Pongo abelii 45.43 5.00e-102 362.00
IUUC-Pca-100120 Procavia capensis 37.46 3.00e-58 217.00
IUUC-Pva-102960 Pteropus vampyrus 45.19 1.00e-100 358.00
IUUC-Pgr-103538 Puccinia graminis 46.60 5.00e-114 402.00
IUUC-Ptt-103990 Puccinia triticina 41.22 5.00e-41 160.00
IUUC-Pte-104261 Pyrenophora teres 72.84 0.00e+00 677.00
IUUC-Pyt-104780 Pyrenophora triticirepentis 73.06 0.00e+00 678.00
IUUC-Rno-105123 Rattus norvegicus 45.43 5.00e-102 362.00
IUUC-Sce-106208 Saccharomyces cerevisiae 28.22 1.00e-35 142.00
IUUC-Sha-107010 Sarcophilus harrisii 45.19 4.00e-101 359.00
IUUC-Sja-107899 Schizosaccharomyces japonicus 33.26 4.00e-65 239.00
IUUC-Ssl-108571 Sclerotinia sclerotiorum 73.15 0.00e+00 657.00
IUUC-Sar-113309 Sorex araneus 44.80 4.00e-97 346.00
IUUC-Sre-115003 Sporisorium reilianum 48.92 3.00e-123 433.00
IUUC-Ssc-116148 Sus scrofa 45.43 5.00e-102 362.00
IUUC-Tgu-117299 Taeniopygia guttata 45.69 7.00e-102 362.00
IUUC-Tru-117721 Takifugu rubripes 45.67 6.00e-103 365.00
IUUC-Tsy-119493 Tarsius syrichta 45.67 2.00e-101 360.00
IUUC-Tni-120355 Tetraodon nigroviridis 45.67 1.00e-101 361.00
IUUC-Tre-121977 Trichoderma reesei 65.62 2.00e-177 613.00
IUUC-Tvi-122661 Trichoderma virens 66.60 4.00e-178 615.00
IUUC-Tme-127031 Tuber melanosporum 66.59 3.00e-177 612.00
IUUC-Tbe-127492 Tupaia belangeri 39.41 2.00e-45 174.00
IUUC-Ttr-128929 Tursiops truncatus 45.43 1.00e-101 361.00
IUUC-Uma-129347 Ustilago maydis 48.39 4.00e-121 426.00
IUUC-Vpa-130532 Vicugna pacos 39.75 2.00e-80 290.00
IUUC-Xtr-131985 Xenopus tropicalis 45.19 1.00e-101 361.00
IUUC-Xma-133314 Xiphophorus maculatus 46.63 4.00e-104 369.00
IUUC-Yli-134403 Yarrowia lipolytica 42.66 3.00e-91 327.00
Created Date 25-Jun-2017

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