iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-060060

Ensembl Protein ID

ENSMGAP00000007992.2

UniProt Accession

G1N741; G1N741_MELGA

Protein Name

Uncharacterized protein

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000007818.2	ENSMGAT00000008782.2	ENSMGAP00000007992.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	29.03	4.50e-02	35.80	IUUC-Ath-007157
ULD/UDP/UFD/MUB	29.03	4.50e-02	35.80	IUUC-Ath-007157
UBD/Alpha-Helix/UBA	45.29	9.00e-29	125.00	IUUC-Hsa-046519
ULD/UDP/UBQ/UBQ_PIM	45.29	9.00e-29	125.00	IUUC-Hsa-046519
UBD/Alpha-Helix/UBA	45.62	2.00e-14	77.40	IUUC-Mmu-063258
ULD/UDP/UBQ/UBQ_PIM	45.62	2.00e-14	77.40	IUUC-Mmu-063258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

IKCSMKSHYD KCFSCAPSIQ RKVKALKEKI ESERGKDAFP VAGQKLIYAV FLLCFDLDLK 60
SYKDNHKRTV AALVNKPKAA TTTSPTTATQ QTNSTTGISV TTAAPTPVSA PTPAAAPVPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAATGTT CCATGAAGAG TCATTATGAT AAATGTTTCA GCTGCGCCCC CAGCATTCAA 60
CGAAAAGGAA ATGGAAGTAC ATAGGAGTAT TTTCTGTCCA AATTTCTCAA CTTTTCATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR029071--Ubiquitin-rel_dom
IPR015360--XPC-bd

Pfam

PF09280--XPC-binding

SMART

SM00727--STI1

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	67.31	6.00e-13	68.20
IUUC-Atr-003116	Amborella trichopoda	42.59	4.00e-09	55.50
IUUC-Apl-003371	Anas platyrhynchos	54.38	2.00e-29	122.00
IUUC-Aca-004599	Anolis carolinensis	44.10	1.00e-18	87.00
IUUC-Aly-006159	Arabidopsis lyrata	27.97	5.00e-12	64.70
IUUC-Ath-007157	Arabidopsis thaliana	29.52	5.00e-11	61.60
IUUC-Ame-010830	Astyanax mexicanus	47.44	9.00e-15	72.40
IUUC-Bta-012922	Bos taurus	49.02	3.00e-14	72.80
IUUC-Bol-016300	Brassica oleracea	33.07	5.00e-10	58.20
IUUC-Bra-016952	Brassica rapa	29.44	1.00e-09	57.00
IUUC-Cel-018364	Caenorhabditis elegans	44.68	2.00e-03	36.20
IUUC-Cja-018772	Callithrix jacchus	47.31	1.00e-17	84.00
IUUC-Cfa-020683	Canis familiaris	44.62	4.00e-17	82.00
IUUC-Cpo-022145	Cavia porcellus	49.32	1.00e-13	70.50
IUUC-Cre-022810	Chlamydomonas reinhardtii	47.73	5.00e-07	48.10
IUUC-Csa-023714	Chlorocebus sabaeus	44.68	2.00e-35	142.00
IUUC-Cho-024814	Choloepus hoffmanni	57.14	3.00e-10	58.90
IUUC-Cin-025741	Ciona intestinalis	40.85	8.00e-09	53.90
IUUC-Csv-025823	Ciona savignyi	37.84	2.00e-08	52.40
IUUC-Dre-028369	Danio rerio	42.67	3.00e-20	92.00
IUUC-Dno-029543	Dasypus novemcinctus	47.31	1.00e-18	87.00
IUUC-Dor-031041	Dipodomys ordii	96.30	2.00e-09	56.20
IUUC-Dme-032027	Drosophila melanogaster	26.57	8.00e-14	70.90
IUUC-Ete-032583	Echinops telfairi	67.86	1.00e-14	73.90
IUUC-Eca-034243	Equus caballus	51.37	3.00e-14	72.40
IUUC-Eeu-034721	Erinaceus europaeus	44.30	6.00e-13	67.80
IUUC-Fca-035679	Felis catus	45.70	1.00e-16	80.50
IUUC-Fal-037148	Ficedula albicollis	53.25	9.00e-15	74.30
IUUC-Gmo-038528	Gadus morhua	40.62	3.00e-16	79.00
IUUC-Gga-040544	Gallus gallus	58.75	1.00e-43	169.00
IUUC-Gac-042298	Gasterosteus aculeatus	77.78	1.00e-15	76.60
IUUC-Gma-044045	Glycine max	29.03	1.00e-11	63.90
IUUC-Ggo-045125	Gorilla gorilla	51.28	5.00e-16	78.20
IUUC-Hsa-046519	Homo sapiens	51.28	5.00e-16	78.20
IUUC-Itr-048295	Ictidomys tridecemlineatus	51.28	7.00e-16	77.80
IUUC-Lch-050553	Latimeria chalumnae	63.93	1.00e-15	77.40
IUUC-Lpe-050929	Leersia perrieri	40.00	2.00e-07	49.30
IUUC-Loc-051748	Lepisosteus oculatus	47.30	2.00e-13	70.10
IUUC-Laf-054293	Loxodonta africana	46.24	1.00e-16	80.50
IUUC-Mcc-055600	Macaca mulatta	46.77	4.00e-20	91.70
IUUC-Meu-056459	Macropus eugenii	55.36	1.00e-12	67.00
IUUC-Mtr-058713	Medicago truncatula	47.83	1.00e-08	53.90
IUUC-Mmr-061759	Microcebus murinus	46.24	5.00e-18	84.70
IUUC-Mdo-061967	Monodelphis domestica	50.00	5.00e-14	71.60
IUUC-Mmu-063258	Mus musculus	44.02	4.00e-17	82.00
IUUC-Mac-064724	Musa acuminata	26.32	1.00e-09	57.00
IUUC-Mpu-066389	Mustela putorius furo	57.14	2.00e-15	76.60
IUUC-Mlu-067999	Myotis lucifugus	47.31	2.00e-16	79.70
IUUC-Ncr-068685	Neurospora crassa	60.00	3.00e-09	55.50
IUUC-Nle-069655	Nomascus leucogenys	46.77	3.00e-20	92.40
IUUC-Opr-070234	Ochotona princeps	67.86	2.00e-14	73.20
IUUC-Ont-072271	Oreochromis niloticus	57.41	1.00e-11	63.90
IUUC-Oan-073572	Ornithorhynchus anatinus	34.90	6.00e-09	54.70
IUUC-Ocu-074831	Oryctolagus cuniculus	46.24	5.00e-16	78.20
IUUC-Oba-075872	Oryza barthii	40.00	2.00e-07	50.10
IUUC-Ogl-077021	Oryza glaberrima	40.00	2.00e-07	50.10
IUUC-Oin-079817	Oryza indica	43.48	1.00e-06	47.00
IUUC-Ome-081866	Oryza meridionalis	43.48	1.00e-06	47.00
IUUC-Oni-083092	Oryza nivara	43.48	1.00e-06	47.00
IUUC-Opu-083756	Oryza punctata	43.48	2.00e-06	46.60
IUUC-Oru-084816	Oryza rufipogon	43.48	1.00e-06	47.00
IUUC-Osa-086112	Oryza sativa	43.48	1.00e-06	47.00
IUUC-Ola-086474	Oryzias latipes	40.91	1.00e-15	76.60
IUUC-Olu-087843	Ostreococcus lucimarinus	28.77	1.00e-09	56.60
IUUC-Oga-088023	Otolemur garnettii	45.16	6.00e-18	84.70
IUUC-Oar-089964	Ovis aries	51.37	3.00e-14	72.40
IUUC-Ptr-091165	Pan troglodytes	45.71	3.00e-15	75.90
IUUC-Pan-092009	Papio anubis	46.24	9.00e-20	90.90
IUUC-Psi-093477	Pelodiscus sinensis	67.31	4.00e-13	68.60
IUUC-Pfo-096607	Poecilia formosa	57.89	8.00e-13	67.80
IUUC-Pab-097868	Pongo abelii	45.71	5.00e-15	74.70
IUUC-Pop-099774	Populus trichocarpa	43.33	2.00e-09	55.50
IUUC-Pca-100652	Procavia capensis	47.95	8.00e-14	70.90
IUUC-Pva-102137	Pteropus vampyrus	48.12	6.00e-15	74.70
IUUC-Ptt-103717	Puccinia triticina	61.54	2.00e-08	52.80
IUUC-Rno-104844	Rattus norvegicus	44.02	4.00e-17	82.00
IUUC-Sha-107073	Sarcophilus harrisii	67.31	6.00e-13	68.20
IUUC-Sja-107851	Schizosaccharomyces japonicus	64.29	1.00e-10	60.10
IUUC-Sit-109813	Setaria italica	46.34	2.00e-07	49.70
IUUC-Sly-111480	Solanum lycopersicum	28.48	2.00e-09	56.20
IUUC-Stu-112054	Solanum tuberosum	47.83	2.00e-09	55.80
IUUC-Sar-112925	Sorex araneus	41.94	9.00e-14	70.90
IUUC-Ssc-116329	Sus scrofa	47.85	1.00e-17	83.60
IUUC-Tgu-116918	Taeniopygia guttata	49.54	2.00e-30	126.00
IUUC-Tru-117920	Takifugu rubripes	41.86	1.00e-16	80.10
IUUC-Tsy-118836	Tarsius syrichta	66.67	1.00e-14	73.90
IUUC-Tni-120493	Tetraodon nigroviridis	38.19	8.00e-17	80.90
IUUC-Tca-121594	Theobroma cacao	47.73	1.00e-08	53.50
IUUC-Tbe-127603	Tupaia belangeri	67.35	7.00e-14	70.90
IUUC-Ttr-128464	Tursiops truncatus	47.85	1.00e-17	83.60
IUUC-Vpa-130357	Vicugna pacos	66.67	1.00e-12	66.60
IUUC-Vvi-131039	Vitis vinifera	31.65	2.00e-10	59.30
IUUC-Xtr-132679	Xenopus tropicalis	50.00	5.00e-15	75.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence