iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tni-120773

UUCD1 version

UUC-TeN-00606

Ensembl Protein ID

ENSTNIP00000005018.1

UniProt Accession

H3C9U6; H3C9U6_TETNG

Protein Name

Coronin

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000014919.1	ENSTNIT00000005164.1	ENSTNIP00000005018.1
ENSTNIG00000014919.1	ENSTNIT00000018188.1	ENSTNIP00000017964.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-15	56.1	79	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHt++v +++f   +d++++sGs D+++++W++ +g l
   Q: 79   GHTGPVLDIEFcphNDNIIASGSEDCSVMIWEIPDGGL 116
           8***********9877****************998876 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MSRSFVRNSK FRHVFGQASK ADQCYDDIRI SQMTWDSNFC SVNPKFVAMI VDASGGGAFM 60
VLPLSKTGRI DMSYPTVCGH TGPVLDIEFC PHNDNIIASG SEDCSVMIWE IPDGGLTSPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCGGA GTTTCGTTAG GAACAGCAAG TTCCGTCACG TCTTTGGCCA GGCCTCCAAA 60
GCCGACCAGT GCTACGATGA CATCAGGATC TCCCAGATGA CGTGGGACAG CAACTTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011101	Astyanax mexicanus	83.88	0.00e+00	787.00
IUUC-Cne-026773	Cryptococcus neoformans	38.57	2.00e-82	299.00
IUUC-Dre-028167	Danio rerio	83.66	0.00e+00	783.00
IUUC-Gmo-039519	Gadus morhua	79.27	0.00e+00	771.00
IUUC-Gac-042545	Gasterosteus aculeatus	85.68	0.00e+00	813.00
IUUC-Ont-072391	Oreochromis niloticus	88.02	0.00e+00	823.00
IUUC-Ola-087129	Oryzias latipes	83.40	0.00e+00	804.00
IUUC-Pfo-096735	Poecilia formosa	86.49	0.00e+00	810.00
IUUC-Tru-117655	Takifugu rubripes	90.85	0.00e+00	867.00
IUUC-Uma-129489	Ustilago maydis	36.23	2.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence