iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095826

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545093

Gene Name

PHYPADRAFT_3703

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S204_77V6	PP1S204_77V6.1	PP1S204_77V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-26	91.0	354	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.afsdtllvsGsdDgtikvWDlrt 32
           gHt+ v +l ++ d +l+s+s Dgtik+W++ +
   Q: 354  GHTNVVMDLlCW-DSFLLSCSLDGTIKIWSVNS 385
           89999999548*.67***************866 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MMAGMEVDDG STRVGSKRNY SRSGNAAGSG GGAGGRSHGQ QVCRYWQEGR CVKGDDCQWL 60
HPGNAGSTGR GNSAGSAKRS NNAHEYRDRE ARDPAGGWGY GGGGFTSGSN QGRPRNVSAR 120

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Nucleotide Sequence
(Fasta)

CCCCACAATC GGAACCCGAT GCCGTTGCGA CGTTTCTCGT CGCTCCGGTG ATGGCATGAC 60
GGAATTCCAC TTGGGTTGTT GCCCGAAGCT GAAATTCAGG TGTCTCGTAT AGACTGTGAA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

ppp:PHYPADRAFT_3703

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002831	Amborella trichopoda	47.51	2.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence