iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	5.30e-14	51.8	687	714
UBD/Alpha-Helix/CUE	4.80e-06	26.9	12	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 2    eaqWaCsaCTflNePeavkCemCsrpRg 29
           +a+W+C++CTflN+P++++Ce+C++pR+
   Q: 687  GAPWNCDSCTFLNHPALNRCEQCEMPRY 714
           78*************************7 PP

UBD/Alpha-Helix/CUE

   S: 5    aleqLkeiFPnldysviqvvLeantgsleaavnnLLegs 43
            l+ L++ FP+ ++ v+ +++++n+++lea++ +L ++s
   Q: 12   VLHDLRQRFPEIPEGVVSQCMLQNNNNLEACCRALSQES 50
           699*********************************987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAQSSPQLDI QVLHDLRQRF PEIPEGVVSQ CMLQNNNNLE ACCRALSQES SKYLYMEYHS 60
PEDNRMNRNR LLHINLGIHS PSSYHPGDGA HLNGGRTLVH SSSDGHIDPQ HTAGKQLICL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAAA GCAGTCCACA GCTTGATATT CAGGTTCTCC ATGATCTTCG ACAACGTTTT 60
CCTGAAATTC CAGAGGGTGT GGTATCTCAG TGCATGTTAC AGGTATGTTT CCTGCAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR001876--Znf_RanBP2

PROSITE

PS51140--CUE
PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF02845--CUE

SMART

SM00546--CUE
SM00547--ZnF_RBZ

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0008270--F:zinc ion binding

KEGG

rno:317546

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001479	Ailuropoda melanoleuca	93.31	0.00e+00	1056.00
IUUC-Atr-002761	Amborella trichopoda	54.17	4.00e-04	38.90
IUUC-Apl-003957	Anas platyrhynchos	81.08	0.00e+00	861.00
IUUC-Aca-005020	Anolis carolinensis	75.94	0.00e+00	794.00
IUUC-Ame-011322	Astyanax mexicanus	45.84	2.00e-67	250.00
IUUC-Bta-012378	Bos taurus	94.77	4.00e-133	468.00
IUUC-Cja-018917	Callithrix jacchus	93.58	0.00e+00	1062.00
IUUC-Cfa-020333	Canis familiaris	93.86	0.00e+00	1070.00
IUUC-Cpo-022384	Cavia porcellus	91.10	0.00e+00	1069.00
IUUC-Csa-023536	Chlorocebus sabaeus	93.02	0.00e+00	1003.00
IUUC-Dre-028192	Danio rerio	48.54	1.00e-61	231.00
IUUC-Dno-029493	Dasypus novemcinctus	92.86	0.00e+00	1018.00
IUUC-Dme-031784	Drosophila melanogaster	54.55	3.00e-04	40.80
IUUC-Ete-032743	Echinops telfairi	90.35	0.00e+00	1050.00
IUUC-Eca-033530	Equus caballus	93.58	0.00e+00	1064.00
IUUC-Eeu-035002	Erinaceus europaeus	92.92	0.00e+00	882.00
IUUC-Fca-035595	Felis catus	93.03	0.00e+00	1043.00
IUUC-Fal-036772	Ficedula albicollis	79.14	0.00e+00	862.00
IUUC-Gmo-038724	Gadus morhua	51.98	2.00e-45	177.00
IUUC-Gga-040397	Gallus gallus	82.84	3.00e-142	498.00
IUUC-Gac-042605	Gasterosteus aculeatus	55.07	5.00e-58	218.00
IUUC-Ggo-045454	Gorilla gorilla	93.30	0.00e+00	1027.00
IUUC-Hsa-046688	Homo sapiens	93.58	0.00e+00	1029.00
IUUC-Itr-048163	Ictidomys tridecemlineatus	93.72	0.00e+00	1072.00
IUUC-Lch-049632	Latimeria chalumnae	57.58	3.00e-163	568.00
IUUC-Laf-054539	Loxodonta africana	94.14	0.00e+00	1073.00
IUUC-Mcc-055842	Macaca mulatta	93.30	0.00e+00	1009.00
IUUC-Mla-058933	Melampsora laricipopulina	43.59	1.00e-01	30.80
IUUC-Mga-059642	Meleagris gallopavo	80.22	0.00e+00	827.00
IUUC-Mmr-061140	Microcebus murinus	94.14	0.00e+00	1070.00
IUUC-Mdo-062726	Monodelphis domestica	85.91	0.00e+00	1015.00
IUUC-Mmu-063805	Mus musculus	96.65	0.00e+00	1107.00
IUUC-Mpu-066164	Mustela putorius furo	93.85	0.00e+00	1076.00
IUUC-Mlu-066947	Myotis lucifugus	90.77	0.00e+00	979.00
IUUC-Nle-069044	Nomascus leucogenys	93.44	0.00e+00	1028.00
IUUC-Opr-071211	Ochotona princeps	86.23	0.00e+00	673.00
IUUC-Ont-071714	Oreochromis niloticus	49.86	1.00e-59	224.00
IUUC-Oan-072910	Ornithorhynchus anatinus	77.07	4.00e-92	332.00
IUUC-Ocu-074006	Oryctolagus cuniculus	94.28	0.00e+00	1062.00
IUUC-Ola-087258	Oryzias latipes	61.18	7.00e-61	228.00
IUUC-Oga-088238	Otolemur garnettii	93.31	0.00e+00	1029.00
IUUC-Oar-090069	Ovis aries	92.33	0.00e+00	1035.00
IUUC-Ptr-091494	Pan troglodytes	93.58	0.00e+00	1029.00
IUUC-Pan-092668	Papio anubis	93.16	0.00e+00	1003.00
IUUC-Psi-093369	Pelodiscus sinensis	79.83	0.00e+00	890.00
IUUC-Pfo-096048	Poecilia formosa	47.03	5.00e-65	241.00
IUUC-Pab-097899	Pongo abelii	94.86	5.00e-152	531.00
IUUC-Pca-100126	Procavia capensis	89.75	0.00e+00	930.00
IUUC-Pva-103031	Pteropus vampyrus	90.00	0.00e+00	969.00
IUUC-Sha-107639	Sarcophilus harrisii	86.75	0.00e+00	1000.00
IUUC-Sar-113032	Sorex araneus	92.14	4.00e-171	595.00
IUUC-Ssc-115940	Sus scrofa	92.75	0.00e+00	1051.00
IUUC-Tgu-116804	Taeniopygia guttata	84.94	0.00e+00	795.00
IUUC-Tru-118326	Takifugu rubripes	44.44	3.00e-47	183.00
IUUC-Tsy-119508	Tarsius syrichta	90.15	6.00e-152	531.00
IUUC-Tni-120668	Tetraodon nigroviridis	42.51	1.00e-69	257.00
IUUC-Tme-127206	Tuber melanosporum	50.00	2.10e-02	33.90
IUUC-Tbe-127935	Tupaia belangeri	92.51	5.00e-154	538.00
IUUC-Ttr-128906	Tursiops truncatus	89.82	0.00e+00	1032.00
IUUC-Vpa-130231	Vicugna pacos	84.18	6.00e-132	464.00
IUUC-Xtr-131801	Xenopus tropicalis	66.62	0.00e+00	756.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence