iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131148

UUCD1 version

UUC-ViV-00210

Ensembl Protein ID

VIT_11s0016g01910.t01

UniProt Accession

D7TCM6; D7TCM6_VITVI

Genbank Protein ID

CBI27884.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595756

Gene Name

DWA1; VIT_11s0016g01910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_11s0016g01910	VIT_11s0016g01910.t01	VIT_11s0016g01910.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-16	59.0	202	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+d  +c+    ++ + +++Gs Dgt ++WD  +g++++
   Q: 202  GHSDYLHCI-IarNSsNQIITGSEDGTARIWDCQSGKCIQ 240
           8*******9.668556**********************97 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGSDARDWDE DGYRNSILKE REIQTRTVFR AIFAPSQNPN PDVIVVASSD GTLASYSISS 60
CISQLSGFGN ARPRKSLLGL PVAEPNCFLQ GHDGPAYDVK FYGDGEESLL LSCGDDGRIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCCTAAC CCTAATGGGT TCGGATGCGA GGGACTGGGA CGAAGATGGG TATAGAAACA 60
GCATATTGAA AGAAAGAGAG ATCCAAACAC GAACCGTTTT TAGAGCCATA TTCGCACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0000347--C:THO complex
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0010267--P:production of ta-siRNAs involved in RNA interference
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	56.87	2.00e-117	414.00
IUUC-Aml-001693	Ailuropoda melanoleuca	27.13	9.00e-25	106.00
IUUC-Atr-002699	Amborella trichopoda	61.69	6.00e-109	386.00
IUUC-Aca-004231	Anolis carolinensis	28.32	4.00e-31	127.00
IUUC-Aly-006385	Arabidopsis lyrata	63.61	5.00e-133	466.00
IUUC-Ath-006723	Arabidopsis thaliana	62.80	5.00e-131	459.00
IUUC-Ame-010813	Astyanax mexicanus	26.09	9.00e-20	89.40
IUUC-Bta-013458	Bos taurus	26.72	2.00e-24	105.00
IUUC-Bdi-014935	Brachypodium distachyon	58.54	2.00e-119	421.00
IUUC-Bol-015442	Brassica oleracea	64.32	1.00e-133	468.00
IUUC-Bra-017807	Brassica rapa	63.78	2.00e-139	487.00
IUUC-Cja-019061	Callithrix jacchus	26.72	4.00e-25	107.00
IUUC-Cfa-021146	Canis familiaris	27.13	6.00e-25	107.00
IUUC-Cpo-022512	Cavia porcellus	26.80	2.00e-24	105.00
IUUC-Cre-022937	Chlamydomonas reinhardtii	25.37	3.00e-10	58.50
IUUC-Csa-023055	Chlorocebus sabaeus	27.13	8.00e-26	110.00
IUUC-Cho-024693	Choloepus hoffmanni	31.45	8.00e-19	85.90
IUUC-Cin-025181	Ciona intestinalis	29.07	3.00e-26	111.00
IUUC-Csv-025852	Ciona savignyi	28.25	5.00e-24	103.00
IUUC-Dre-028221	Danio rerio	27.06	3.00e-31	128.00
IUUC-Dno-029200	Dasypus novemcinctus	31.29	5.00e-16	76.30
IUUC-Dor-030863	Dipodomys ordii	27.53	3.00e-25	108.00
IUUC-Dme-032016	Drosophila melanogaster	24.40	3.00e-19	88.60
IUUC-Eca-034363	Equus caballus	27.13	6.00e-25	107.00
IUUC-Fca-036546	Felis catus	27.53	6.00e-25	107.00
IUUC-Gmo-038513	Gadus morhua	27.06	2.00e-23	102.00
IUUC-Gac-042606	Gasterosteus aculeatus	26.88	1.00e-30	125.00
IUUC-Gma-043171	Glycine max	68.53	9.00e-143	498.00
IUUC-Ggo-044877	Gorilla gorilla	27.13	3.00e-25	108.00
IUUC-Hsa-045813	Homo sapiens	27.13	4.00e-25	107.00
IUUC-Hvu-047782	Hordeum vulgare	61.88	1.00e-60	224.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	27.18	2.00e-24	105.00
IUUC-Lch-049506	Latimeria chalumnae	29.11	1.00e-32	132.00
IUUC-Lpe-051203	Leersia perrieri	57.18	8.00e-110	389.00
IUUC-Loc-052451	Lepisosteus oculatus	32.37	5.00e-30	124.00
IUUC-Laf-053864	Loxodonta africana	27.53	3.00e-25	108.00
IUUC-Mcc-055705	Macaca mulatta	26.51	2.00e-22	98.60
IUUC-Meu-055926	Macropus eugenii	29.03	8.00e-26	110.00
IUUC-Mtr-058556	Medicago truncatula	67.47	2.00e-145	507.00
IUUC-Mmr-060836	Microcebus murinus	26.72	7.00e-25	107.00
IUUC-Mdo-062534	Monodelphis domestica	28.22	3.00e-24	105.00
IUUC-Mmu-063560	Mus musculus	27.13	2.00e-24	105.00
IUUC-Mac-065134	Musa acuminata	63.32	2.00e-131	461.00
IUUC-Mpu-066031	Mustela putorius furo	27.13	6.00e-25	107.00
IUUC-Mlu-068051	Myotis lucifugus	26.61	1.00e-24	105.00
IUUC-Nle-069080	Nomascus leucogenys	27.13	4.00e-25	107.00
IUUC-Opr-070787	Ochotona princeps	27.02	9.00e-25	106.00
IUUC-Ont-071952	Oreochromis niloticus	27.12	5.00e-30	124.00
IUUC-Oan-073334	Ornithorhynchus anatinus	29.85	5.00e-19	87.40
IUUC-Oba-075175	Oryza barthii	58.81	6.00e-112	396.00
IUUC-Obr-076393	Oryza brachyantha	59.57	4.00e-113	400.00
IUUC-Ogl-077603	Oryza glaberrima	55.22	2.00e-71	261.00
IUUC-Ogu-078211	Oryza glumaepatula	59.03	9.00e-111	392.00
IUUC-Oin-079554	Oryza indica	66.32	4.00e-105	373.00
IUUC-Olo-080922	Oryza longistaminata	49.52	5.00e-70	257.00
IUUC-Ome-081127	Oryza meridionalis	52.88	7.00e-93	333.00
IUUC-Oni-082376	Oryza nivara	59.03	1.00e-110	392.00
IUUC-Opu-083163	Oryza punctata	57.53	8.00e-111	392.00
IUUC-Oru-084311	Oryza rufipogon	59.25	1.00e-110	392.00
IUUC-Osa-085762	Oryza sativa	55.93	9.00e-70	255.00
IUUC-Oga-088804	Otolemur garnettii	27.43	5.00e-26	110.00
IUUC-Oar-090095	Ovis aries	25.91	1.00e-23	102.00
IUUC-Ptr-090731	Pan troglodytes	27.13	4.00e-25	107.00
IUUC-Pan-092595	Papio anubis	27.53	4.00e-26	110.00
IUUC-Psi-093866	Pelodiscus sinensis	29.07	6.00e-30	123.00
IUUC-Pma-094236	Petromyzon marinus	25.15	7.00e-28	116.00
IUUC-Pfo-096095	Poecilia formosa	28.32	2.00e-29	122.00
IUUC-Pab-098385	Pongo abelii	27.13	3.00e-25	108.00
IUUC-Pop-099433	Populus trichocarpa	70.89	4.00e-156	543.00
IUUC-Pca-101119	Procavia capensis	26.79	6.00e-21	94.00
IUUC-Ppe-101677	Prunus persica	72.39	3.00e-163	566.00
IUUC-Pva-102726	Pteropus vampyrus	27.42	2.00e-26	112.00
IUUC-Rno-105576	Rattus norvegicus	27.13	2.00e-24	105.00
IUUC-Sha-106774	Sarcophilus harrisii	28.23	8.00e-25	106.00
IUUC-Sit-109988	Setaria italica	57.57	2.00e-121	427.00
IUUC-Sly-110864	Solanum lycopersicum	67.87	2.00e-119	421.00
IUUC-Sar-113060	Sorex araneus	26.61	2.00e-23	101.00
IUUC-Sbi-114699	Sorghum bicolor	57.41	5.00e-121	426.00
IUUC-Ssc-116445	Sus scrofa	26.72	1.00e-24	106.00
IUUC-Tru-117834	Takifugu rubripes	26.42	2.00e-30	125.00
IUUC-Tni-119651	Tetraodon nigroviridis	25.66	5.00e-30	124.00
IUUC-Tca-121318	Theobroma cacao	76.82	3.00e-160	556.00
IUUC-Tae-124184	Triticum aestivum	57.14	2.00e-118	417.00
IUUC-Tur-126226	Triticum urartu	65.29	7.00e-90	322.00
IUUC-Tbe-128079	Tupaia belangeri	22.69	3.00e-12	64.70
IUUC-Ttr-128391	Tursiops truncatus	25.30	4.00e-19	87.80
IUUC-Xtr-132743	Xenopus tropicalis	27.84	4.00e-28	117.00
IUUC-Xma-133722	Xiphophorus maculatus	26.25	2.00e-31	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence