iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132743

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

THO complex 6

Genbank Nucleotide ID

AAMC01132522

Gene Name

thoc6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000011373.3	ENSXETT00000024839.3	ENSXETP00000024839.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-16	57.9	166	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+d ++cla+  + +  vsG+ Dgt+++WDlr g +++
   Q: 166  GHEDYIHCLALreQQRECVSGGEDGTVRIWDLRNGAQTH 204
           8**********874489****************998775 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

LHEWVPLACH IGTTDISRSL ELLHMTVFSQ CFSPCGKYLV AGNNLGQIGV FSLSAALSSE 60
AKELSKQPVA IFQAHSGPIY SLISTERHLI SSGGNEVKGW NWNDIHKKGC TQLWTRCIPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCATGAGT GGGTTCCCCT GGCGTGCCAT ATAGGAACAG TAGGAAAGCG GTGGTTCACC 60
TTTAAGATAA CTTTTAGTTT GTTAGAATGT ACTATTCATA ACAACTTTGC AATTGGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.90	1.00e-31	130.00
IUUC-Aml-001693	Ailuropoda melanoleuca	62.02	5.00e-116	410.00
IUUC-Atr-002699	Amborella trichopoda	26.18	9.00e-21	94.00
IUUC-Aca-004231	Anolis carolinensis	70.95	2.00e-131	461.00
IUUC-Aly-006385	Arabidopsis lyrata	27.33	7.00e-30	124.00
IUUC-Ath-006723	Arabidopsis thaliana	27.19	4.00e-29	121.00
IUUC-Ame-010813	Astyanax mexicanus	60.47	4.00e-81	293.00
IUUC-Bta-013458	Bos taurus	61.08	5.00e-114	404.00
IUUC-Bdi-014935	Brachypodium distachyon	29.93	9.00e-32	130.00
IUUC-Bol-015442	Brassica oleracea	27.55	3.00e-28	119.00
IUUC-Bra-017807	Brassica rapa	27.11	3.00e-30	125.00
IUUC-Cja-019061	Callithrix jacchus	61.83	2.00e-115	408.00
IUUC-Cfa-021146	Canis familiaris	62.31	2.00e-117	414.00
IUUC-Cpo-022512	Cavia porcellus	62.09	1.00e-116	412.00
IUUC-Csa-023055	Chlorocebus sabaeus	62.02	6.00e-117	413.00
IUUC-Cho-024693	Choloepus hoffmanni	61.34	6.00e-64	236.00
IUUC-Cin-025181	Ciona intestinalis	35.91	2.00e-56	212.00
IUUC-Csv-025852	Ciona savignyi	33.85	2.00e-51	195.00
IUUC-Dre-028221	Danio rerio	59.06	9.00e-120	422.00
IUUC-Dno-029200	Dasypus novemcinctus	60.00	2.00e-57	214.00
IUUC-Dor-030863	Dipodomys ordii	63.28	1.00e-116	412.00
IUUC-Dme-032016	Drosophila melanogaster	31.68	1.00e-38	153.00
IUUC-Eca-034363	Equus caballus	62.31	2.00e-116	412.00
IUUC-Fca-036546	Felis catus	62.02	2.00e-116	411.00
IUUC-Gmo-038513	Gadus morhua	55.18	4.00e-101	361.00
IUUC-Gac-042606	Gasterosteus aculeatus	58.12	2.00e-114	405.00
IUUC-Gma-042881	Glycine max	27.57	7.00e-32	130.00
IUUC-Ggo-044877	Gorilla gorilla	62.02	3.00e-117	414.00
IUUC-Hsa-045813	Homo sapiens	62.02	2.00e-117	414.00
IUUC-Hvu-047782	Hordeum vulgare	31.91	4.00e-24	103.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	63.10	5.00e-118	417.00
IUUC-Lch-049506	Latimeria chalumnae	69.94	3.00e-134	470.00
IUUC-Lpe-051203	Leersia perrieri	32.21	3.00e-28	119.00
IUUC-Loc-052451	Lepisosteus oculatus	56.25	2.00e-102	364.00
IUUC-Laf-053864	Loxodonta africana	62.02	5.00e-115	407.00
IUUC-Mcc-055705	Macaca mulatta	58.26	6.00e-101	360.00
IUUC-Meu-055926	Macropus eugenii	66.06	1.00e-114	405.00
IUUC-Mtr-058556	Medicago truncatula	27.35	1.00e-33	136.00
IUUC-Mmr-060836	Microcebus murinus	62.61	4.00e-117	414.00
IUUC-Mdo-062534	Monodelphis domestica	64.74	7.00e-113	400.00
IUUC-Mmu-063560	Mus musculus	62.02	8.00e-117	412.00
IUUC-Mac-065134	Musa acuminata	28.11	6.00e-33	134.00
IUUC-Mpu-066031	Mustela putorius furo	62.02	2.00e-116	411.00
IUUC-Mlu-068051	Myotis lucifugus	61.72	3.00e-114	404.00
IUUC-Nle-069080	Nomascus leucogenys	62.61	4.00e-117	414.00
IUUC-Opr-070787	Ochotona princeps	59.94	1.00e-107	382.00
IUUC-Ont-071952	Oreochromis niloticus	59.06	2.00e-115	408.00
IUUC-Oan-073334	Ornithorhynchus anatinus	65.50	2.00e-90	325.00
IUUC-Oba-075175	Oryza barthii	33.01	8.00e-30	124.00
IUUC-Obr-076393	Oryza brachyantha	32.04	2.00e-28	119.00
IUUC-Ogl-077603	Oryza glaberrima	39.09	9.00e-19	87.00
IUUC-Ogu-078211	Oryza glumaepatula	33.01	1.00e-29	124.00
IUUC-Oin-079554	Oryza indica	33.01	5.00e-30	124.00
IUUC-Olo-080922	Oryza longistaminata	34.46	1.00e-21	97.40
IUUC-Ome-081127	Oryza meridionalis	25.73	6.00e-16	78.60
IUUC-Oni-082376	Oryza nivara	33.01	8.00e-30	124.00
IUUC-Opu-083163	Oryza punctata	32.04	6.00e-29	121.00
IUUC-Oru-084311	Oryza rufipogon	33.01	1.00e-29	123.00
IUUC-Osa-085762	Oryza sativa	39.09	2.00e-18	85.90
IUUC-Oga-088804	Otolemur garnettii	62.91	2.00e-118	418.00
IUUC-Oar-090095	Ovis aries	60.48	3.00e-113	401.00
IUUC-Ptr-090731	Pan troglodytes	62.31	2.00e-117	414.00
IUUC-Pan-092595	Papio anubis	61.83	6.00e-116	410.00
IUUC-Psi-093866	Pelodiscus sinensis	70.00	2.00e-120	425.00
IUUC-Pma-094236	Petromyzon marinus	59.01	1.00e-119	422.00
IUUC-Pfo-096095	Poecilia formosa	56.25	3.00e-109	387.00
IUUC-Pab-098385	Pongo abelii	62.02	7.00e-117	413.00
IUUC-Pop-099433	Populus trichocarpa	25.66	9.00e-30	124.00
IUUC-Pca-101119	Procavia capensis	62.10	1.00e-77	282.00
IUUC-Ppe-101677	Prunus persica	26.19	1.00e-30	126.00
IUUC-Pva-102726	Pteropus vampyrus	62.91	9.00e-118	416.00
IUUC-Rno-105576	Rattus norvegicus	61.90	3.00e-116	411.00
IUUC-Sha-106774	Sarcophilus harrisii	65.44	4.00e-114	404.00
IUUC-Sit-109988	Setaria italica	29.21	2.00e-32	132.00
IUUC-Sly-110864	Solanum lycopersicum	27.39	3.00e-24	106.00
IUUC-Sar-113060	Sorex araneus	59.75	9.00e-87	312.00
IUUC-Sbi-114699	Sorghum bicolor	29.80	3.00e-33	135.00
IUUC-Ssc-116445	Sus scrofa	61.72	5.00e-116	410.00
IUUC-Tru-117834	Takifugu rubripes	58.81	1.00e-121	429.00
IUUC-Tni-119651	Tetraodon nigroviridis	58.12	3.00e-118	417.00
IUUC-Tca-121318	Theobroma cacao	27.21	3.00e-27	115.00
IUUC-Tae-124184	Triticum aestivum	29.82	1.00e-31	130.00
IUUC-Tur-126226	Triticum urartu	32.04	9.00e-29	120.00
IUUC-Tbe-128079	Tupaia belangeri	50.94	4.00e-66	244.00
IUUC-Ttr-128391	Tursiops truncatus	58.58	2.00e-106	378.00
IUUC-Vvi-131148	Vitis vinifera	27.72	9.00e-26	110.00
IUUC-Xma-133722	Xiphophorus maculatus	56.25	1.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence