iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022797

Ensembl Protein ID

EDO98127

UniProt Accession

A8JD99; A8JD99_CHLRE

Genbank Protein ID

EDO98127.1

Protein Name

COP-II coat subunit

Genbank Nucleotide ID

DS496161

Gene Name

SEC13; CHLREDRAFT_139713

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_139713	EDO98127	EDO98127

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-26	89.1	53	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+ +++  +    +l+s+s D+ + vW   +g++
   Q: 53   GHEGPVWQVSWghPKfgSILASCSFDHRVIVWKEAQGNQ 91
           8**********994443679************9777665 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MTLANFESGH QDMVHDAQLD YYGRRLATCS SDRTVKVFDI VGDHHTHLAD LRGHEGPVWQ 60
VSWGHPKFGS ILASCSFDHR VIVWKEAQGN QWQQAYITPG NLHTASVNSI CWAPYELGLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAATTTAA GTTGAATCTT GCACTACCTA CATTTTCCTT GGGACACAGT AGGTAGCGCG 60
GGCAAAATGA CGCTCGCTAA TTTCGAGAGC GGACACCAAG ACATGGTGCA CGATGCGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003847--F:1-alkyl-2-acetylglycerophosphocholine esterase activity

KEGG

cre:CHLREDRAFT_139713

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	55.19	8.00e-96	341.00
IUUC-Aml-001832	Ailuropoda melanoleuca	54.97	1.00e-96	344.00
IUUC-Atr-002914	Amborella trichopoda	54.82	2.00e-94	336.00
IUUC-Apl-003992	Anas platyrhynchos	56.40	1.00e-95	340.00
IUUC-Aca-005283	Anolis carolinensis	55.63	5.00e-99	352.00
IUUC-Aly-005654	Arabidopsis lyrata	54.97	9.00e-94	334.00
IUUC-Ath-006810	Arabidopsis thaliana	54.30	9.00e-93	331.00
IUUC-Ago-007827	Ashbya gossypii	45.30	3.00e-74	269.00
IUUC-Acl-008205	Aspergillus clavatus	49.33	1.00e-75	274.00
IUUC-Afl-008748	Aspergillus flavus	48.51	2.00e-77	280.00
IUUC-Afu-008791	Aspergillus fumigatus	48.32	2.00e-74	270.00
IUUC-Ani-009152	Aspergillus nidulans	51.32	3.00e-79	286.00
IUUC-Ang-009765	Aspergillus niger	49.17	9.00e-78	281.00
IUUC-Aor-009927	Aspergillus oryzae	47.81	5.00e-74	269.00
IUUC-Ate-010248	Aspergillus terreus	49.50	6.00e-78	282.00
IUUC-Ame-011478	Astyanax mexicanus	54.49	8.00e-97	344.00
IUUC-Bgr-012276	Blumeria graminis	49.67	3.00e-78	283.00
IUUC-Bta-012700	Bos taurus	55.30	9.00e-96	341.00
IUUC-Bci-013722	Botrytis cinerea	49.83	1.00e-76	277.00
IUUC-Bdi-014818	Brachypodium distachyon	54.87	1.00e-94	337.00
IUUC-Bol-015303	Brassica oleracea	56.62	5.00e-95	338.00
IUUC-Bra-016973	Brassica rapa	55.81	2.00e-95	341.00
IUUC-Cel-018479	Caenorhabditis elegans	39.60	4.00e-59	219.00
IUUC-Cja-019956	Callithrix jacchus	53.45	4.00e-90	322.00
IUUC-Cfa-020752	Canis familiaris	54.97	1.00e-96	344.00
IUUC-Cpo-021871	Cavia porcellus	55.30	4.00e-97	345.00
IUUC-Csa-023393	Chlorocebus sabaeus	54.79	1.00e-96	344.00
IUUC-Cho-024786	Choloepus hoffmanni	41.33	9.00e-62	228.00
IUUC-Cin-025332	Ciona intestinalis	51.50	2.00e-91	327.00
IUUC-Csv-025926	Ciona savignyi	51.50	8.00e-90	321.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	49.14	2.00e-72	263.00
IUUC-Cne-027054	Cryptococcus neoformans	47.50	4.00e-75	273.00
IUUC-Cme-027165	Cyanidioschyzon merolae	38.00	6.00e-52	197.00
IUUC-Dre-027782	Danio rerio	53.64	7.00e-96	341.00
IUUC-Dno-029628	Dasypus novemcinctus	54.30	1.00e-95	341.00
IUUC-Dor-030650	Dipodomys ordii	56.12	8.00e-78	281.00
IUUC-Dse-031206	Dothistroma septosporum	48.67	1.00e-74	271.00
IUUC-Dme-031854	Drosophila melanogaster	50.00	5.00e-83	299.00
IUUC-Ete-032618	Echinops telfairi	39.26	2.00e-54	204.00
IUUC-Eca-033268	Equus caballus	54.64	3.00e-96	343.00
IUUC-Eeu-035119	Erinaceus europaeus	40.91	2.00e-13	67.80
IUUC-Fca-035918	Felis catus	54.64	9.00e-96	341.00
IUUC-Fal-037551	Ficedula albicollis	56.70	2.00e-90	323.00
IUUC-Fox-037763	Fusarium oxysporum	49.33	9.00e-78	281.00
IUUC-Fso-038341	Fusarium solani	50.50	9.00e-79	285.00
IUUC-Gmo-038638	Gadus morhua	55.81	1.00e-96	344.00
IUUC-Ggr-039865	Gaeumannomyces graminis	48.48	3.00e-75	273.00
IUUC-Gga-040193	Gallus gallus	54.97	6.00e-99	352.00
IUUC-Gac-041337	Gasterosteus aculeatus	33.44	6.00e-34	136.00
IUUC-Gma-042837	Glycine max	57.14	6.00e-98	348.00
IUUC-Ggo-045252	Gorilla gorilla	54.46	5.00e-96	342.00
IUUC-Hsa-046565	Homo sapiens	54.46	6.00e-96	342.00
IUUC-Hvu-047835	Hordeum vulgare	55.19	3.00e-94	336.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	54.79	1.00e-96	343.00
IUUC-Kpa-049148	Komagataella pastoris	47.32	1.00e-76	278.00
IUUC-Lch-050421	Latimeria chalumnae	54.97	9.00e-97	344.00
IUUC-Lpe-051187	Leersia perrieri	54.82	4.00e-96	345.00
IUUC-Loc-052167	Lepisosteus oculatus	54.28	5.00e-96	342.00
IUUC-Lma-053250	Leptosphaeria maculans	49.66	5.00e-77	279.00
IUUC-Laf-054304	Loxodonta africana	54.82	2.00e-96	343.00
IUUC-Mcc-055519	Macaca mulatta	54.79	1.00e-96	344.00
IUUC-Meu-056439	Macropus eugenii	54.13	2.00e-96	343.00
IUUC-Mor-057241	Magnaporthe oryzae	49.31	3.00e-72	263.00
IUUC-Mpo-057373	Magnaporthe poae	41.98	3.00e-58	216.00
IUUC-Mtr-058412	Medicago truncatula	56.81	2.00e-98	350.00
IUUC-Mla-058966	Melampsora laricipopulina	46.67	2.00e-78	283.00
IUUC-Mga-060066	Meleagris gallopavo	56.40	1.00e-95	340.00
IUUC-Mvi-060290	Microbotryum violaceum	46.63	1.00e-77	284.00
IUUC-Mmr-060717	Microcebus murinus	54.79	2.00e-96	343.00
IUUC-Mdo-062496	Monodelphis domestica	54.46	9.00e-97	344.00
IUUC-Mmu-063490	Mus musculus	55.12	6.00e-97	345.00
IUUC-Mac-064736	Musa acuminata	57.14	4.00e-96	342.00
IUUC-Mpu-066601	Mustela putorius furo	54.97	1.00e-96	344.00
IUUC-Mlu-067501	Myotis lucifugus	54.13	3.00e-95	339.00
IUUC-Nfi-068360	Neosartorya fischeri	45.77	9.00e-58	214.00
IUUC-Ncr-068928	Neurospora crassa	50.00	3.00e-77	280.00
IUUC-Nle-069028	Nomascus leucogenys	54.13	8.00e-96	341.00
IUUC-Opr-070446	Ochotona princeps	56.55	2.00e-93	333.00
IUUC-Ont-071587	Oreochromis niloticus	55.96	1.00e-97	347.00
IUUC-Oan-073211	Ornithorhynchus anatinus	54.79	3.00e-97	346.00
IUUC-Ocu-074306	Oryctolagus cuniculus	56.15	5.00e-97	345.00
IUUC-Oba-075069	Oryza barthii	53.57	2.00e-93	333.00
IUUC-Obr-076667	Oryza brachyantha	53.90	6.00e-94	335.00
IUUC-Ogl-077208	Oryza glaberrima	53.57	2.00e-93	333.00
IUUC-Ogu-078513	Oryza glumaepatula	53.57	2.00e-93	333.00
IUUC-Oin-079094	Oryza indica	53.57	2.00e-93	333.00
IUUC-Olo-080473	Oryza longistaminata	53.57	2.00e-93	333.00
IUUC-Ome-081643	Oryza meridionalis	53.57	2.00e-93	333.00
IUUC-Oni-082589	Oryza nivara	53.57	2.00e-93	333.00
IUUC-Opu-083677	Oryza punctata	53.90	1.00e-93	334.00
IUUC-Oru-084537	Oryza rufipogon	53.57	2.00e-93	333.00
IUUC-Osa-085449	Oryza sativa	53.57	2.00e-93	333.00
IUUC-Ola-087226	Oryzias latipes	55.48	5.00e-97	345.00
IUUC-Olu-087893	Ostreococcus lucimarinus	54.64	2.00e-91	327.00
IUUC-Oga-088837	Otolemur garnettii	54.79	2.00e-96	343.00
IUUC-Oar-089594	Ovis aries	54.97	9.00e-96	341.00
IUUC-Ptr-091132	Pan troglodytes	54.46	3.00e-96	342.00
IUUC-Pan-092013	Papio anubis	32.95	1.00e-30	124.00
IUUC-Psi-093568	Pelodiscus sinensis	56.36	4.00e-96	342.00
IUUC-Pma-094172	Petromyzon marinus	54.79	2.00e-39	152.00
IUUC-Pno-094955	Phaeosphaeria nodorum	50.17	8.00e-76	275.00
IUUC-Ppa-095835	Physcomitrella patens	57.72	1.00e-95	341.00
IUUC-Pfo-096063	Poecilia formosa	55.48	1.00e-97	347.00
IUUC-Pab-098674	Pongo abelii	54.46	1.00e-95	341.00
IUUC-Pop-099402	Populus trichocarpa	56.48	1.00e-98	350.00
IUUC-Pca-100824	Procavia capensis	42.90	4.00e-68	249.00
IUUC-Ppe-101707	Prunus persica	57.14	3.00e-97	346.00
IUUC-Pva-103161	Pteropus vampyrus	51.82	9.00e-91	325.00
IUUC-Pgr-103573	Puccinia graminis	51.10	5.00e-78	282.00
IUUC-Ptt-103700	Puccinia triticina	51.61	1.00e-74	271.00
IUUC-Pte-104267	Pyrenophora teres	48.99	5.00e-74	268.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	48.31	9.00e-68	248.00
IUUC-Rno-104833	Rattus norvegicus	55.12	8.00e-97	345.00
IUUC-Sce-106437	Saccharomyces cerevisiae	45.05	7.00e-68	248.00
IUUC-Sha-106611	Sarcophilus harrisii	54.13	2.00e-96	343.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	49.67	2.00e-79	286.00
IUUC-Spo-108362	Schizosaccharomyces pombe	51.16	1.00e-81	294.00
IUUC-Smo-109674	Selaginella moellendorffii	58.86	3.00e-99	353.00
IUUC-Sit-110132	Setaria italica	55.19	4.00e-95	339.00
IUUC-Sly-111254	Solanum lycopersicum	54.15	4.00e-90	322.00
IUUC-Stu-112591	Solanum tuberosum	54.33	1.00e-90	324.00
IUUC-Sar-113279	Sorex araneus	29.35	5.00e-24	103.00
IUUC-Sbi-114229	Sorghum bicolor	54.79	2.00e-94	337.00
IUUC-Sre-114898	Sporisorium reilianum	45.56	8.00e-82	295.00
IUUC-Ssc-115995	Sus scrofa	56.00	1.00e-49	186.00
IUUC-Tgu-116793	Taeniopygia guttata	55.30	7.00e-93	332.00
IUUC-Tru-117797	Takifugu rubripes	55.15	6.00e-97	345.00
IUUC-Tsy-118913	Tarsius syrichta	29.52	2.00e-22	98.20
IUUC-Tni-120366	Tetraodon nigroviridis	54.64	4.00e-96	342.00
IUUC-Tca-121068	Theobroma cacao	56.48	1.00e-97	347.00
IUUC-Tre-121899	Trichoderma reesei	50.84	3.00e-79	286.00
IUUC-Tvi-122380	Trichoderma virens	51.34	1.00e-79	287.00
IUUC-Tae-125528	Triticum aestivum	55.19	9.00e-96	341.00
IUUC-Tur-126202	Triticum urartu	53.90	5.00e-93	332.00
IUUC-Tme-127181	Tuber melanosporum	49.04	3.00e-84	303.00
IUUC-Ttr-128448	Tursiops truncatus	54.18	8.00e-76	275.00
IUUC-Uma-129661	Ustilago maydis	47.23	2.00e-82	297.00
IUUC-Vda-129666	Verticillium dahliae	49.14	8.00e-70	254.00
IUUC-Vpa-130318	Vicugna pacos	54.97	6.00e-96	342.00
IUUC-Vvi-130868	Vitis vinifera	57.81	4.00e-99	352.00
IUUC-Xtr-131859	Xenopus tropicalis	55.48	7.00e-99	351.00
IUUC-Xma-133898	Xiphophorus maculatus	55.48	7.00e-98	348.00
IUUC-Yli-134559	Yarrowia lipolytica	52.07	4.00e-82	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence