iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000070847.6	ENSDART00000036273.7	ENSDARP00000037611.7
ENSDARG00000070847.6	ENSDART00000074105.5	ENSDARP00000068594.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-07	32.3	8	76
E3 activity/RING/RING	1.40e-08	36.1	11	51

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceen 72
           ++ Cp+  ++++ Pv+l++ +++ +++++++ + +++ +cPv+r++ ++ed   nl l+++ +++++e+
   Q: 8    DYSCPVCQDIFKTPVILSCSHSFCKECLQQFWKIKNTqECPVCRRRSSKEDPPVNLGLKNVCESFLAER 76
           589***************************997777779**************************9886 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ fk+ p++l+C H f+++Clq++     + ++++ CP+Cr
   Q: 11   CPVCQDIFKT-PVILSCSHSFCKECLQQF----WKIKNTQECPVCR 51
           *********9.999************555....4799********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MASSAEYDYS CPVCQDIFKT PVILSCSHSF CKECLQQFWK IKNTQECPVC RRRSSKEDPP 60
VNLGLKNVCE SFLAERNERR SSGSEEICSL HSEKLKLFCL DDKQPVCLVC RDSTQHDNHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGAAGAGA CTCGATGAAT GATCATTTCA CTTCTTTCTC AAACTTTCTT CTGCATTTCT 60
GGACAAAATC AAACAGGAAT CAGTGAAGAA CAAAGAGGAA AACGGATTAT TGAGGATTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:563088

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lch-049652	Latimeria chalumnae	43.18	8.00e-91	327.00
IUUC-Ola-086711	Oryzias latipes	43.98	2.00e-105	375.00
IUUC-Pfo-096840	Poecilia formosa	53.29	3.00e-116	412.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence