iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007465

UUCD1 version

UUC-ArT-00894

Ensembl Protein ID

AT5G41450.1

UniProt Accession

Q9FN56; Q9FN56_ARATH

Genbank Protein ID

AAY78848.1; AED94680.1; BAB08516.1

Protein Name

Putative uncharacterized protein; RING/U-box superfamily protein; Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

DQ056702; CP002688; AB006707

Gene Name

MYC6.15; MYC6_15; At5g41450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G41450	AT5G41450.1	AT5G41450.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-09	37.4	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f+dg    +++ C Hvfh+ C+  w       +++ +CP Cr
   Q: 110  CPICLEEFEDGheiIRINMCRHVFHRFCIDPW------LNQNLTCPNCR 152
           ********99877788888*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMESPPSDNL DFFSTVLFLF IYMVFPIAIT VIFIYKLCID LSQQPPTEIA RETHQNSHPP 60
PDQLQQDIET GHVTLPQPQQ NIAVGYMTWI HETTILEFKD IKEGSNKIFC PICLEEFEDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGAGT CTCCACCGTC AGATAATCTG GATTTTTTTT CGACAGTATT GTTTTTATTT 60
ATATATATGG TATTTCCAAT TGCCATTACA GTAATCTTTA TTTATAAACT TTGCATAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G41450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000644	Aegilops tauschii	28.77	9.00e-15	72.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence