iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068502

Ensembl Protein ID

CADNFIAP00001802

UniProt Accession

A1D4V2; A1D4V2_NEOFI

Genbank Protein ID

EAW23445.1

Protein Name

Transcription initiation factor TFIID subunit, putative

Genbank Nucleotide ID

DS027688

Gene Name

NFIA_021540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00001841	CADNFIAT00001841	CADNFIAP00001802

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-38	128.1	631	660
UBD/Beta-Prp	2.30e-59	200.1	390	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +++++l++  + t lvsG+ Dgt++vWD++
   Q: 631  GGIWSLSWsVEsTVLVSGGADGTVRVWDVT 660
           57******94459***************86 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgk............ilvtgseD 73
           ++  + i+c++fs+d+ l+a+g + + i+vw+++ +k                r+l gh+++v+av f p++             +l+++s D
   Q: 390  HNTYDGINCLDFSDDNMLVAAGMQESYIRVWSMDGKKIqttydnvddappsnSRRLIGHSGPVYAVAFAPSATrsegavaptnarWLLSSSAD 482
           56667899***************************999*********************************99999***************** PP
   S: 74   rtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           +ti++w+l+  +c++++kgh++ v++l++ p g+++vsG+hd+t+r+w +++    + ++ ghd+ v cv++hp++ ++++Gs D tvr+W +
   Q: 483  KTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQR-IFVGHDQDVDCVCFHPNSAYVFTGSSDHTVRMWAV 574
           ************************************************999999999.*********************************** PP
   S: 167  ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdl 251
            tg+ +r +tg ht+ ++ l+ +++gk l+s+++ g++ lwdl  g+ +++++gh    ++s+  s +++ lvsg++Dg++r+Wd+
   Q: 575  TTGNAVRMFTG-HTGNITALACSRDGKLLASADDQGSILLWDLAPGRLLKRMRGHGkGGIWSLSWSVESTVLVSGGADGTVRVWDV 659
           **********9.******************************************964789************************97 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MSAPGGAPSP APRSASIGPG GGGMSMPPQQ PMGNTTPVGA PTPGPPPPPP SGAMSQQNLN 60
QIVIDYLAKK GYSRTEAMLR MESANQEIDG RPLPPLGEDA RPKYRMGFDI LKVWVEDNLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGCGC CAGGCGGGGC TCCGAGCCCT GCACCTCGAA GTGCAAGCAT CGGCCCCGGT 60
GGTGGTGGTA TGTCTATGCC TCCCCAGCAG CCCATGGGAA ACACCACTCC AGTGGGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0003743--F:translation initiation factor activity
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

KEGG

nfi:NFIA_021540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	41.67	6.00e-54	204.00
IUUC-Aml-001607	Ailuropoda melanoleuca	38.14	7.00e-81	293.00
IUUC-Atr-003136	Amborella trichopoda	36.69	3.00e-72	264.00
IUUC-Apl-004193	Anas platyrhynchos	37.85	1.00e-79	289.00
IUUC-Aca-004522	Anolis carolinensis	37.44	2.00e-80	291.00
IUUC-Aly-006476	Arabidopsis lyrata	39.28	2.00e-70	258.00
IUUC-Ath-006587	Arabidopsis thaliana	41.08	5.00e-71	260.00
IUUC-Ago-007736	Ashbya gossypii	35.30	1.00e-129	455.00
IUUC-Acl-008092	Aspergillus clavatus	93.91	0.00e+00	1352.00
IUUC-Afl-008659	Aspergillus flavus	92.34	0.00e+00	1351.00
IUUC-Afu-008902	Aspergillus fumigatus	99.13	0.00e+00	1379.00
IUUC-Ani-009462	Aspergillus nidulans	88.16	0.00e+00	1081.00
IUUC-Aor-010083	Aspergillus oryzae	92.49	0.00e+00	1352.00
IUUC-Ate-010271	Aspergillus terreus	93.64	0.00e+00	1331.00
IUUC-Ame-010721	Astyanax mexicanus	37.88	2.00e-80	291.00
IUUC-Bgr-012257	Blumeria graminis	51.71	0.00e+00	662.00
IUUC-Bta-013539	Bos taurus	38.14	6.00e-81	293.00
IUUC-Bci-013737	Botrytis cinerea	55.19	0.00e+00	763.00
IUUC-Bdi-015041	Brachypodium distachyon	37.87	6.00e-64	237.00
IUUC-Bol-015483	Brassica oleracea	40.81	1.00e-70	259.00
IUUC-Bra-017660	Brassica rapa	30.15	3.00e-84	304.00
IUUC-Cel-018451	Caenorhabditis elegans	25.93	2.00e-51	195.00
IUUC-Cja-018881	Callithrix jacchus	38.14	1.00e-80	292.00
IUUC-Cfa-020056	Canis familiaris	38.14	8.00e-81	293.00
IUUC-Cpo-021454	Cavia porcellus	32.68	1.00e-92	332.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	33.55	8.00e-43	166.00
IUUC-Csa-023045	Chlorocebus sabaeus	38.14	2.00e-80	291.00
IUUC-Cho-024284	Choloepus hoffmanni	43.97	2.00e-65	241.00
IUUC-Cin-025457	Ciona intestinalis	37.62	7.00e-57	211.00
IUUC-Csv-025882	Ciona savignyi	34.78	2.00e-69	254.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	50.21	0.00e+00	686.00
IUUC-Cne-026876	Cryptococcus neoformans	32.69	4.00e-88	317.00
IUUC-Cme-027302	Cyanidioschyzon merolae	36.93	4.00e-63	234.00
IUUC-Dre-027980	Danio rerio	40.05	1.00e-83	302.00
IUUC-Dno-028863	Dasypus novemcinctus	38.14	9.00e-81	293.00
IUUC-Dor-030561	Dipodomys ordii	38.14	9.00e-81	293.00
IUUC-Dse-031547	Dothistroma septosporum	54.03	0.00e+00	716.00
IUUC-Dme-031917	Drosophila melanogaster	30.15	4.00e-71	261.00
IUUC-Ete-032712	Echinops telfairi	37.68	1.00e-58	219.00
IUUC-Eca-033927	Equus caballus	38.19	3.00e-81	294.00
IUUC-Eeu-034449	Erinaceus europaeus	42.00	2.00e-77	281.00
IUUC-Fca-036325	Felis catus	38.14	1.00e-80	293.00
IUUC-Fal-036604	Ficedula albicollis	37.38	1.00e-79	289.00
IUUC-Fox-038049	Fusarium oxysporum	48.06	2.00e-170	590.00
IUUC-Fso-038302	Fusarium solani	49.02	0.00e+00	635.00
IUUC-Gmo-038832	Gadus morhua	36.89	1.00e-78	286.00
IUUC-Ggr-039878	Gaeumannomyces graminis	46.41	0.00e+00	652.00
IUUC-Gga-041147	Gallus gallus	37.67	4.00e-80	291.00
IUUC-Gac-041373	Gasterosteus aculeatus	37.62	9.00e-80	289.00
IUUC-Gma-044041	Glycine max	36.52	1.00e-69	255.00
IUUC-Ggo-044568	Gorilla gorilla	38.24	2.00e-58	218.00
IUUC-Hsa-045971	Homo sapiens	38.14	1.00e-80	292.00
IUUC-Hvu-047695	Hordeum vulgare	38.77	3.00e-65	240.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	38.14	1.00e-80	293.00
IUUC-Kpa-049402	Komagataella pastoris	37.36	9.00e-138	482.00
IUUC-Lch-049526	Latimeria chalumnae	36.51	2.00e-75	275.00
IUUC-Lpe-051560	Leersia perrieri	38.42	2.00e-68	251.00
IUUC-Loc-052882	Lepisosteus oculatus	38.05	2.00e-80	291.00
IUUC-Lma-053212	Leptosphaeria maculans	54.41	0.00e+00	677.00
IUUC-Laf-053859	Loxodonta africana	38.14	9.00e-81	293.00
IUUC-Mcc-054957	Macaca mulatta	38.14	3.00e-80	290.00
IUUC-Meu-056182	Macropus eugenii	40.13	6.00e-58	216.00
IUUC-Mor-057024	Magnaporthe oryzae	47.01	0.00e+00	634.00
IUUC-Mpo-057520	Magnaporthe poae	46.72	7.00e-179	619.00
IUUC-Mtr-058754	Medicago truncatula	30.81	2.00e-88	318.00
IUUC-Mla-058881	Melampsora laricipopulina	38.72	5.00e-82	297.00
IUUC-Mga-059776	Meleagris gallopavo	37.67	7.00e-80	290.00
IUUC-Mvi-060208	Microbotryum violaceum	34.20	3.00e-96	344.00
IUUC-Mmr-061783	Microcebus murinus	38.14	3.00e-80	290.00
IUUC-Mdo-062856	Monodelphis domestica	38.37	4.00e-81	294.00
IUUC-Mmu-064218	Mus musculus	38.14	9.00e-81	293.00
IUUC-Mac-064886	Musa acuminata	37.84	2.00e-56	211.00
IUUC-Mpu-065735	Mustela putorius furo	38.14	7.00e-81	293.00
IUUC-Mlu-067544	Myotis lucifugus	38.05	3.00e-79	287.00
IUUC-Ncr-068891	Neurospora crassa	49.44	2.00e-178	617.00
IUUC-Nle-069389	Nomascus leucogenys	38.14	1.00e-80	293.00
IUUC-Opr-071042	Ochotona princeps	36.03	5.00e-70	257.00
IUUC-Ont-071455	Oreochromis niloticus	38.55	1.00e-82	299.00
IUUC-Oan-073181	Ornithorhynchus anatinus	38.37	2.00e-80	291.00
IUUC-Ocu-073758	Oryctolagus cuniculus	38.19	3.00e-81	295.00
IUUC-Oba-075739	Oryza barthii	43.31	1.00e-59	222.00
IUUC-Obr-076111	Oryza brachyantha	38.62	5.00e-72	263.00
IUUC-Ogl-077914	Oryza glaberrima	41.23	2.00e-60	225.00
IUUC-Ogu-078190	Oryza glumaepatula	40.88	7.00e-64	236.00
IUUC-Oin-079473	Oryza indica	42.91	2.00e-63	234.00
IUUC-Olo-080557	Oryza longistaminata	40.00	3.00e-56	210.00
IUUC-Ome-081831	Oryza meridionalis	47.71	8.00e-53	199.00
IUUC-Oni-082431	Oryza nivara	40.88	3.00e-64	237.00
IUUC-Opu-083239	Oryza punctata	47.71	9.00e-53	199.00
IUUC-Oru-085154	Oryza rufipogon	40.88	2.00e-63	234.00
IUUC-Osa-086189	Oryza sativa	42.91	2.00e-63	234.00
IUUC-Ola-086574	Oryzias latipes	38.03	1.00e-81	296.00
IUUC-Olu-087616	Ostreococcus lucimarinus	35.25	8.00e-63	233.00
IUUC-Oga-088827	Otolemur garnettii	38.14	2.00e-80	291.00
IUUC-Oar-089648	Ovis aries	38.14	7.00e-81	293.00
IUUC-Ptr-091195	Pan troglodytes	38.14	8.00e-81	293.00
IUUC-Pan-091978	Papio anubis	38.14	8.00e-81	293.00
IUUC-Psi-093598	Pelodiscus sinensis	37.50	1.00e-79	288.00
IUUC-Pma-094593	Petromyzon marinus	38.94	1.00e-53	202.00
IUUC-Pno-094823	Phaeosphaeria nodorum	55.22	0.00e+00	700.00
IUUC-Ppa-095455	Physcomitrella patens	30.42	9.00e-89	319.00
IUUC-Pfo-097120	Poecilia formosa	39.49	2.00e-83	302.00
IUUC-Pab-098771	Pongo abelii	38.14	9.00e-81	293.00
IUUC-Pop-099542	Populus trichocarpa	38.22	1.00e-73	269.00
IUUC-Pca-100727	Procavia capensis	37.85	2.00e-58	218.00
IUUC-Ppe-101686	Prunus persica	31.09	5.00e-86	310.00
IUUC-Pva-103211	Pteropus vampyrus	41.53	4.00e-61	227.00
IUUC-Pgr-103603	Puccinia graminis	32.61	2.00e-90	325.00
IUUC-Ptt-103995	Puccinia triticina	34.49	8.00e-74	270.00
IUUC-Pte-104359	Pyrenophora teres	55.49	0.00e+00	724.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	56.81	0.00e+00	717.00
IUUC-Rno-105064	Rattus norvegicus	38.14	8.00e-81	293.00
IUUC-Sce-106186	Saccharomyces cerevisiae	34.37	5.00e-128	449.00
IUUC-Sha-106582	Sarcophilus harrisii	32.68	4.00e-90	323.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	40.06	5.00e-137	479.00
IUUC-Spo-108142	Schizosaccharomyces pombe	41.59	2.00e-142	498.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	55.35	0.00e+00	760.00
IUUC-Smo-109111	Selaginella moellendorffii	37.37	1.00e-68	252.00
IUUC-Sit-109804	Setaria italica	37.80	2.00e-66	245.00
IUUC-Sly-111693	Solanum lycopersicum	30.56	3.00e-85	308.00
IUUC-Sar-113381	Sorex araneus	38.81	5.00e-63	233.00
IUUC-Sbi-114849	Sorghum bicolor	36.78	3.00e-63	234.00
IUUC-Sre-114945	Sporisorium reilianum	37.01	9.00e-77	280.00
IUUC-Ssc-115582	Sus scrofa	37.36	4.00e-77	280.00
IUUC-Tgu-116899	Taeniopygia guttata	37.38	3.00e-79	287.00
IUUC-Tru-118011	Takifugu rubripes	38.08	2.00e-79	288.00
IUUC-Tsy-119622	Tarsius syrichta	29.34	7.00e-36	143.00
IUUC-Tni-120598	Tetraodon nigroviridis	38.26	4.00e-79	287.00
IUUC-Tca-121247	Theobroma cacao	39.10	3.00e-74	271.00
IUUC-Tre-121949	Trichoderma reesei	49.29	2.00e-179	620.00
IUUC-Tvi-122626	Trichoderma virens	48.33	0.00e+00	668.00
IUUC-Tae-123335	Triticum aestivum	38.50	2.00e-67	248.00
IUUC-Tur-126005	Triticum urartu	35.03	2.00e-58	218.00
IUUC-Tme-126904	Tuber melanosporum	44.38	2.00e-155	541.00
IUUC-Tbe-127254	Tupaia belangeri	32.79	3.00e-58	218.00
IUUC-Ttr-128544	Tursiops truncatus	38.14	7.00e-81	293.00
IUUC-Uma-129379	Ustilago maydis	37.47	2.00e-76	279.00
IUUC-Vda-129761	Verticillium dahliae	47.91	3.00e-173	600.00
IUUC-Vpa-130485	Vicugna pacos	38.14	9.00e-81	293.00
IUUC-Vvi-131171	Vitis vinifera	31.17	9.00e-90	322.00
IUUC-Xtr-132762	Xenopus tropicalis	33.33	2.00e-61	228.00
IUUC-Xma-133583	Xiphophorus maculatus	38.79	2.00e-82	298.00
IUUC-Yli-134446	Yarrowia lipolytica	40.00	3.00e-151	527.00
IUUC-Zma-135722	Zea mays	37.06	4.00e-65	240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence