iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000217

Ensembl Protein ID

EMT23063

UniProt Accession

M8BMK4; M8BMK4_AEGTA

Genbank Protein ID

EMT23063.1

Protein Name

RING-H2 finger protein ATL3L

Genbank Nucleotide ID

KD520948

Gene Name

F775_02718

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02718	EMT23063	EMT23063

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-09	38.7	89	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg.....plvlp.CgHvfhadCl.qkwpglknssskefrCPlCr 46
           Ca+Cl+d+ +g     ++v+p CgH++ha+C   kw       +k+ +CPlCr
   Q: 89   CALCLSDYGEGdagelVRVVPaCGHFYHASCGvDKW------LRKHRTCPLCR 135
           ********6666677799999**********55***......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MDPDLALHLE IAAVVVMAVI IVAVAVMASG GACDDAAGAT GSAAVHDADV EAALGDDTLM 60
TYELATARKK EKAKDKAKEK EEEEEEERCA LCLSDYGEGD AGELVRVVPA CGHFYHASCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCGG ACCTGGCGCT CCACCTCGAG ATCGCCGCGG TGGTCGTGAT GGCGGTGATC 60
ATCGTCGCCG TGGCCGTCAT GGCATCCGGC GGAGCCTGCG ACGACGCGGC CGGCGCCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_02718

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014431	Brachypodium distachyon	73.17	2.00e-14	71.20
IUUC-Oba-075984	Oryza barthii	53.95	6.00e-09	52.80
IUUC-Ome-081200	Oryza meridionalis	49.38	2.00e-08	51.60
IUUC-Opu-084084	Oryza punctata	46.46	7.00e-16	75.90
IUUC-Sit-109740	Setaria italica	52.13	2.00e-17	81.60
IUUC-Sbi-114686	Sorghum bicolor	55.91	3.00e-17	80.50
IUUC-Tae-124612	Triticum aestivum	100.00	4.00e-35	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence