iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000752

Ensembl Protein ID

EMT09893

UniProt Accession

M8C436; M8C436_AEGTA

Genbank Protein ID

EMT09893.1

Protein Name

RING-H2 finger protein ATL4O

Genbank Nucleotide ID

KD561256

Gene Name

F775_02857

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02857	EMT09893	EMT09893

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-08	35.4	139	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl + ++g  ++ +p C Hvfh++C+ +w       + +++CP+Cr
   Q: 139  CAVCLGEVEKGeaVRRMPvCLHVFHTECIDRW------LRSHATCPICR 181
           ********66666888889*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSVQGRRASC YDWCSDFTCA HAIFASGFVT APVAVVHFVK RPYSGATILF AGFAAFCTTV 60
SLILCCKFYA ELSRPPWPRW LSSASAEARP LEQQDGRETE VSSNEQLRHP EQAVMWRERD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGTCC AGGGGAGGCG CGCCTCCTGC TACGACTGGT GCAGCGACTT CACGTGCGCG 60
CATGCCATCT TCGCCAGCGG GTTCGTCACC GCGCCGGTCG CCGTCGTGCA CTTCGTCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_02857

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006548	Arabidopsis lyrata	44.62	1.00e-16	80.90
IUUC-Ago-007798	Ashbya gossypii	40.74	6.00e-06	43.90
IUUC-Acl-008182	Aspergillus clavatus	40.00	3.00e-10	57.00
IUUC-Afu-009070	Aspergillus fumigatus	41.43	1.00e-10	58.50
IUUC-Bdi-014529	Brachypodium distachyon	55.51	5.00e-55	206.00
IUUC-Mor-057236	Magnaporthe oryzae	38.30	7.00e-12	64.70
IUUC-Nfi-068442	Neosartorya fischeri	40.00	6.00e-11	59.30
IUUC-Obr-076194	Oryza brachyantha	76.60	5.00e-18	82.80
IUUC-Ogl-077941	Oryza glaberrima	67.86	1.00e-19	88.60
IUUC-Oin-079252	Oryza indica	76.60	7.00e-20	91.70
IUUC-Ome-081346	Oryza meridionalis	67.86	4.00e-19	88.60
IUUC-Opu-084025	Oryza punctata	66.67	3.00e-18	82.00
IUUC-Osa-086237	Oryza sativa	67.86	2.00e-19	88.60
IUUC-Smo-109572	Selaginella moellendorffii	56.36	1.00e-16	79.30
IUUC-Sit-110279	Setaria italica	54.95	4.00e-57	213.00
IUUC-Sbi-113863	Sorghum bicolor	51.35	6.00e-52	196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence