iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017951

Ensembl Protein ID

Bra003689.1-P

UniProt Accession

M4CHK6; M4CHK6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003689	Bra003689.1	Bra003689.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.20e-17	62.8	365	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedek..slveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           C +C+++  d++  ++v+C+ C++++H  C+k++   ++p++e w+C+ C++
   Q: 365  C-LCRNCLTDKDddKIVMCDGCDDAYHIYCMKPP-RASVPDEE-WFCKTCNA 413
           6.7887766554459*******************.*******8.******97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTSNGEGTEK CNGVNSCGGG ANERSRGNKK LQVYKRRKLG RRSVSGSKCK EDERVSVEAG 60
VSHSGSQESV ASELDNQTGE LPELPNPNKP TTEPKYETVT AGCQNVLSQV LASKEFASLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAGCA ATGGTGAAGG TACAGAGAAG TGTAATGGAG TTAATAGTTG TGGTGGTGGT 60
GCTAATGAAA GGTCCAGAGG TAACAAGAAG TTACAAGTGT ACAAGCGGAG AAAGCTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	29.77	1.00e-47	184.00
IUUC-Ath-007282	Arabidopsis thaliana	67.78	7.00e-170	590.00
IUUC-Bdi-014359	Brachypodium distachyon	32.01	2.00e-47	184.00
IUUC-Bol-016145	Brassica oleracea	87.04	0.00e+00	793.00
IUUC-Cne-026851	Cryptococcus neoformans	55.32	2.00e-12	69.30
IUUC-Lpe-051599	Leersia perrieri	31.63	6.00e-45	176.00
IUUC-Ogl-077688	Oryza glaberrima	34.17	1.00e-37	149.00
IUUC-Sit-110347	Setaria italica	31.31	4.00e-47	183.00
IUUC-Sbi-114812	Sorghum bicolor	31.80	8.00e-49	189.00
IUUC-Tae-124404	Triticum aestivum	30.66	2.00e-49	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence