iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-125491

Ensembl Protein ID

TRIAE_CS42_3B_TGACv1_220842_AA0721090.3

UniProt Accession

A0A1D5VQ89; A0A1D5VQ89_WHEAT

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_3B_TGACv1_220842_AA0721090	TRIAE_CS42_3B_TGACv1_220842_AA0721090.1	TRIAE_CS42_3B_TGACv1_220842_AA0721090.1
TRIAE_CS42_3B_TGACv1_220842_AA0721090	TRIAE_CS42_3B_TGACv1_220842_AA0721090.2	TRIAE_CS42_3B_TGACv1_220842_AA0721090.2
TRIAE_CS42_3B_TGACv1_220842_AA0721090	TRIAE_CS42_3B_TGACv1_220842_AA0721090.3	TRIAE_CS42_3B_TGACv1_220842_AA0721090.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-36	125.5	142	180
UBD/Beta-Prp	8.20e-58	198.6	10	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + + +++f +d + +v+G+ D+ +kvWDl+ g+ll+
   Q: 142  GHRGAIKSIRFtPDgRWIVTGGEDNIVKVWDLTAGKLLH 180
           8***********9999*******************9986 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG 155
           ++ + +h+++v+sl++ + s+ ++++G++dr +++w + +++ l   lsgh+++v  v+++  + l+ +G
   Q: 10   FQEFVAHDAEVRSLAIGKkSSRVFITGGSDRNVNLWAIGKQSPLL-SLSGHTSSVEAVEFDTAEVLVLAG 78
           667789************666************************.************************ PP
   S: 156  slDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
           s ++ ++lWdl+ +k++r ltg h +s + ++f++ g++++sgs d+++k+wd++++ c++t++gh+  +
   Q: 79   SSNGSIKLWDLEEAKVVRSLTG-HRSSCTAVEFHPFGEFFASGSSDTDLKIWDIKKKGCLHTYKGHRGAI 147
           *********************9.*********************************************** PP
   S: 226  ksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           ks+rf+p++ ++v+g++D+ +++Wdl+ g+ll+ ++ h 
   Q: 148  KSIRFTPDGRWIVTGGEDNIVKVWDLTAGKLLHDFKFHS 186
           *********************************998775 PP

Organism

Triticum aestivum

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MDPEKRGYKF QEFVAHDAEV RSLAIGKKSS RVFITGGSDR NVNLWAIGKQ SPLLSLSGHT 60
SSVEAVEFDT AEVLVLAGSS NGSIKLWDLE EAKVVRSLTG HRSSCTAVEF HPFGEFFASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAAAGGA CGACAAAAAC TCCACTCTCC CACCCACCCA CGCCGCTCCA CACCCATCCT 60
TCTCACCGCT GCGACTGCGA GCAAGAGAGA GAGGAGAGAG AGAGAGAGAG AGAGAGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000869	Aegilops tauschii	88.58	0.00e+00	1533.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence