iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017822

Ensembl Protein ID

Bra007086.1-P

UniProt Accession

M4CS94; M4CS94_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007086	Bra007086.1	Bra007086.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	83.53	0.00e+00	881.00	IUUC-Ath-007393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MQPQPHIPPA TANAAISAAL KSQRARKNRG SYSCGRCGQP KKGHVCHLPP LDVPSTPIAP 60
EPVTSIAAAA SSTRSTVVSL SSAPLRQSFT NLRRALSFDD DVDARDETDL TDLSLDTEIV 120

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Nucleotide Sequence
(Fasta)

ATGCAGCCTC AGCCGCATAT CCCTCCAGCC ACCGCCAACG CAGCGATCTC AGCCGCCCTT 60
AAATCTCAAC GAGCGAGAAA AAACCGCGGG AGTTACAGTT GCGGACGATG CGGCCAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

Pfam

PF00646--F-box

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000445	Aegilops tauschii	54.99	1.00e-101	362.00
IUUC-Atr-002985	Amborella trichopoda	49.42	1.00e-128	452.00
IUUC-Aly-005592	Arabidopsis lyrata	83.19	0.00e+00	848.00
IUUC-Ath-007393	Arabidopsis thaliana	82.02	0.00e+00	849.00
IUUC-Bdi-014107	Brachypodium distachyon	49.12	7.00e-111	394.00
IUUC-Bol-015754	Brassica oleracea	96.23	0.00e+00	974.00
IUUC-Csv-025861	Ciona savignyi	29.89	1.00e-04	41.60
IUUC-Gma-042847	Glycine max	60.98	8.00e-164	570.00
IUUC-Hvu-047594	Hordeum vulgare	53.65	2.00e-109	389.00
IUUC-Lpe-051054	Leersia perrieri	56.82	9.00e-112	397.00
IUUC-Mtr-057878	Medicago truncatula	68.60	1.00e-154	539.00
IUUC-Mac-065661	Musa acuminata	52.80	6.00e-154	537.00
IUUC-Oba-075222	Oryza barthii	50.10	5.00e-107	380.00
IUUC-Obr-076319	Oryza brachyantha	54.83	7.00e-120	423.00
IUUC-Ogl-077268	Oryza glaberrima	55.90	1.00e-114	406.00
IUUC-Ogu-078988	Oryza glumaepatula	54.99	3.00e-121	428.00
IUUC-Oin-079671	Oryza indica	55.17	1.00e-121	429.00
IUUC-Olo-080720	Oryza longistaminata	55.22	1.00e-101	363.00
IUUC-Oni-082672	Oryza nivara	55.36	8.00e-122	430.00
IUUC-Opu-083555	Oryza punctata	56.66	5.00e-122	431.00
IUUC-Oru-085222	Oryza rufipogon	55.36	6.00e-122	431.00
IUUC-Osa-085326	Oryza sativa	55.18	3.00e-121	428.00
IUUC-Pop-099984	Populus trichocarpa	60.80	2.00e-161	561.00
IUUC-Ppe-102083	Prunus persica	62.14	6.00e-180	623.00
IUUC-Sit-110802	Setaria italica	54.57	1.00e-113	403.00
IUUC-Sly-111264	Solanum lycopersicum	59.07	3.00e-162	565.00
IUUC-Stu-112225	Solanum tuberosum	58.08	2.00e-155	541.00
IUUC-Sbi-114580	Sorghum bicolor	49.38	3.00e-123	435.00
IUUC-Tca-121854	Theobroma cacao	61.82	3.00e-174	604.00
IUUC-Tae-123806	Triticum aestivum	54.34	7.00e-110	390.00
IUUC-Tur-126204	Triticum urartu	52.18	2.00e-91	329.00
IUUC-Vvi-130932	Vitis vinifera	62.21	6.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence