iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114458

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G205100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g027620	Sb06g027620.1	Sb06g027620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	31.1	326	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   +++  + C+H +h++C+q+w     + +k++ CP+C+
   Q: 326  CSICQEEYlaGEEVGKMACKHYYHLSCIQHW-----LRQKNW-CPICK 367
           ********9944499999*************.....566666.****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDEHMGRRTV GGLLFTKGGS ILLFREDGSR PKSKNCCSRH GCSGQHSADK AKGKEVHRAA 60
APNESTPATP GRSQIFRKPN RKPPHESSAS GSISRDAGGS CSETGNRSRD TPGPGRDLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTGTCTCT GTGGTTTGGT TTCTTGGCCA TGCGTATATA ACAACTCCCA GCACTTCCGA 60
TCTCTTCTTA TCGCCCCCTC CCCCTCCCTA TTCCTCCCCT CGATTCTCCG GGTTGATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_06g027620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000715	Aegilops tauschii	66.20	1.00e-78	284.00
IUUC-Aly-005927	Arabidopsis lyrata	61.40	2.00e-38	152.00
IUUC-Ath-007353	Arabidopsis thaliana	59.29	4.00e-38	151.00
IUUC-Bdi-014922	Brachypodium distachyon	75.78	1.00e-72	266.00
IUUC-Bol-015868	Brassica oleracea	59.81	1.00e-37	149.00
IUUC-Bra-017471	Brassica rapa	46.30	1.00e-37	150.00
IUUC-Gac-041830	Gasterosteus aculeatus	31.16	2.00e-13	71.20
IUUC-Gma-042907	Glycine max	54.62	8.00e-37	147.00
IUUC-Hvu-047527	Hordeum vulgare	60.16	2.00e-108	384.00
IUUC-Mac-064708	Musa acuminata	57.14	6.00e-38	151.00
IUUC-Oba-075521	Oryza barthii	69.25	2.00e-134	470.00
IUUC-Obr-076325	Oryza brachyantha	69.95	5.00e-141	493.00
IUUC-Ogl-077843	Oryza glaberrima	72.46	4.00e-145	506.00
IUUC-Ogu-078141	Oryza glumaepatula	68.98	4.00e-134	469.00
IUUC-Oin-079102	Oryza indica	72.19	2.00e-144	504.00
IUUC-Ome-081314	Oryza meridionalis	64.97	2.00e-120	424.00
IUUC-Pop-099998	Populus trichocarpa	56.41	4.00e-36	145.00
IUUC-Sit-110409	Setaria italica	87.50	4.00e-177	612.00
IUUC-Stu-112025	Solanum tuberosum	58.18	2.00e-37	149.00
IUUC-Tca-121441	Theobroma cacao	57.98	2.00e-38	152.00
IUUC-Tae-125190	Triticum aestivum	60.94	2.00e-111	394.00
IUUC-Tur-126633	Triticum urartu	59.02	5.00e-92	330.00
IUUC-Vvi-131488	Vitis vinifera	57.38	1.00e-38	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence