iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003021

Ensembl Protein ID

ERN15594

UniProt Accession

U5CZK9; U5CZK9_AMBTC

Genbank Protein ID

ERN15594.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392502

Gene Name

AMTR_s00048p00159380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00048p00159380	ERN15594	ERN15594

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-19	67.6	450	483
UBD/Beta-Prp	1.50e-42	146.2	403	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlr 31
           H ++v+++af  ++    +++++dD+tikvWD  
   Q: 450  HVGGVNDIAFshPNkqLSIITCGDDKTIKVWDAV 483
           99********996544459*************65 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrs.l..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           k++ +sv +cv   pd+s+l +++  + ++ + +++   lr+ l    h ++v+++ fs+  k   ++t+++D+tikvwd  +g   ++++ghe+ v+s+ 
   Q: 403  KDATISVNRCVWG-PDGSILGVAFSKHIVQTYTYSSTGELRQhLeiDAHVGGVNDIAFSHPNKqlSIITCGDDKTIKVWDAVAGRRQYIFEGHEAPVYSVC 502
           5666677776665.99********99999***998766644313348999********999888999********************************88 PP
   S: 102  fsp.sg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr....tvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
            +  +  +++ s+  d  i+ w  +      + +++   + ++++++ dg  l+s+++ +     +  W+ + g + rt  g  ++s   ++fd ++++++
   Q: 503  PHHkEAiQFIFSTAIDGKIKAWLYDYLGSRVDYDAPGL-WCTTMAYSADGTRLFSCGTSKegesHLVEWNESEGAIKRTYLGFRKRSLGVVQFDTTKNRFL 602
           8775446**************96655444443555544.88889999999999999875422224555999*********999****************** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW 249
           ++++  ++k+wd+ + +++ t ++    + s  +rf +++ +l++++ D  i+i 
   Q: 603  AAGDEFQIKFWDMDNINILTTIEADGGLPASprLRFNKEGSLLAVTTNDSGIKIL 657
           ************************998887622666799999*********9995 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKH FEDQVQAGEW EEVERYLCGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRQDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCCT TGAGCAGGGA GCTTGTTTTT CTTATCTTAC AGTTCTTGGA TGAGGAGAAA 60
TTTAAGGAAA CAGTGCACAA GTAATCCAAT TAATCATGCT TCTGCTTATT TAGCTTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	80.04	0.00e+00	1625.00
IUUC-Bdi-014941	Brachypodium distachyon	79.73	0.00e+00	1608.00
IUUC-Obr-076730	Oryza brachyantha	79.53	0.00e+00	1621.00
IUUC-Ogl-076958	Oryza glaberrima	80.97	0.00e+00	1661.00
IUUC-Olo-080979	Oryza longistaminata	79.94	0.00e+00	1627.00
IUUC-Opu-083223	Oryza punctata	78.29	0.00e+00	1556.00
IUUC-Sit-110121	Setaria italica	80.25	0.00e+00	1628.00
IUUC-Sly-111268	Solanum lycopersicum	80.35	0.00e+00	1622.00
IUUC-Tca-121774	Theobroma cacao	81.01	0.00e+00	1623.00
IUUC-Tae-125673	Triticum aestivum	80.04	0.00e+00	1625.00
IUUC-Tur-126718	Triticum urartu	80.04	0.00e+00	1625.00
IUUC-Vvi-131109	Vitis vinifera	83.21	0.00e+00	1671.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence